WARS2-IT1

Summary

WARS2-IT1 (WARS2 intronic transcript 1, HGNC:41393) is a long non-coding RNA gene on chromosome 1p12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41393
Approved symbol	WARS2-IT1
Name	WARS2 intronic transcript 1
Location	1p12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224238
Ensembl biotype	lncRNA
Entrez	104472716
RNAcentral	URS00007E3A4D — lncRNA, 562 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000423984

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000423984 — 2 exons

Exon	Start	End
ENSE00001594447	119047405	119047532
ENSE00001614706	119062854	119064785

Expression profiles

Bgee: expression breadth ubiquitous, 127 present calls, max score 68.79.

Top tissues by expression

127 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	68.79	silver quality
bone marrow cell	CL:0002092	65.74	silver quality
ventricular zone	UBERON:0003053	65.51	gold quality
right atrium auricular region	UBERON:0006631	63.76	gold quality
right uterine tube	UBERON:0001302	63.14	gold quality
skeletal muscle tissue	UBERON:0001134	58.85	silver quality
tonsil	UBERON:0002372	58.66	silver quality
ganglionic eminence	UBERON:0004023	58.29	gold quality
sural nerve	UBERON:0015488	58.06	silver quality
bone marrow	UBERON:0002371	57.24	silver quality
granulocyte	CL:0000094	56.94	gold quality
subcutaneous adipose tissue	UBERON:0002190	56.56	gold quality
heart	UBERON:0000948	56.43	gold quality
cortical plate	UBERON:0005343	55.96	silver quality
fallopian tube	UBERON:0003889	55.82	gold quality
left coronary artery	UBERON:0001626	55.80	gold quality
adipose tissue	UBERON:0001013	55.57	gold quality
liver	UBERON:0002107	55.30	silver quality
right coronary artery	UBERON:0001625	55.26	gold quality
leukocyte	CL:0000738	54.42	silver quality
omental fat pad	UBERON:0010414	54.39	gold quality
popliteal artery	UBERON:0002250	54.25	gold quality
tibial artery	UBERON:0007610	54.23	gold quality
urinary bladder	UBERON:0001255	53.91	gold quality
apex of heart	UBERON:0002098	53.85	gold quality
lymph node	UBERON:0000029	53.35	gold quality
gall bladder	UBERON:0002110	53.07	gold quality
ovary	UBERON:0000992	52.87	gold quality
myometrium	UBERON:0001296	52.79	gold quality
thoracic mammary gland	UBERON:0005200	52.23	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.22

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.