WASHC3
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Also known as CGI-116
Summary
WASHC3 (WASH complex subunit 3, HGNC:24256) is a protein-coding gene on chromosome 12q23.2, encoding WASH complex subunit 3 (Q9Y3C0). Acts as a component of the WASH core complex that functions as a nucleation-promoting factor (NPF) at the surface of endosomes, where it recruits and activates the Arp2/3 complex to induce actin polymerization, playing a key role in the fission of tubules that serve as transport…. It is a selective cancer dependency (DepMap: 17.1% of cell lines).
Predicted to be involved in actin filament polymerization and exocytosis. Part of WASH complex.
Source: NCBI Gene 51019 — RefSeq curated summary.
At a glance
- Gene–disease (curated): neurodevelopmental disorder (Limited, GenCC)
- GWAS associations: 5
- Clinical variants (ClinVar): 29 total
- Cancer dependency (DepMap): dependent in 17.1% of screened cell lines
- MANE Select transcript:
NM_016053
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:24256 |
| Approved symbol | WASHC3 |
| Name | WASH complex subunit 3 |
| Location | 12q23.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CGI-116 |
| Ensembl gene | ENSG00000120860 |
| Ensembl biotype | protein_coding |
| OMIM | 619925 |
| Entrez | 51019 |
Gene structure
Transcript identifiers
Ensembl transcripts: 17 — 7 protein_coding, 5 nonsense_mediated_decay, 3 retained_intron, 2 protein_coding_CDS_not_defined
ENST00000240079, ENST00000326351, ENST00000500685, ENST00000535501, ENST00000536197, ENST00000536930, ENST00000538761, ENST00000539515, ENST00000540536, ENST00000541569, ENST00000542923, ENST00000544341, ENST00000545679, ENST00000869761, ENST00000869762, ENST00000869763, ENST00000933111
RefSeq mRNA: 2 — MANE Select: NM_016053
NM_001301107, NM_016053
CCDS: CCDS44959, CCDS73512
Canonical transcript exons
ENST00000240079 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001373355 | 102061912 | 102061991 |
| ENSE00002320257 | 102012840 | 102013192 |
| ENSE00003521224 | 102025974 | 102026038 |
| ENSE00003528244 | 102046054 | 102046119 |
| ENSE00003571942 | 102044105 | 102044212 |
| ENSE00003594910 | 102039868 | 102039978 |
| ENSE00003689262 | 102061248 | 102061346 |
Expression profiles
Bgee: expression breadth ubiquitous, 286 present calls, max score 98.63.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 24.2685 / max 487.5155, expressed in 1806 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 132924 | 23.1612 | 1805 |
| 132925 | 0.8272 | 560 |
| 132926 | 0.1994 | 42 |
| 132927 | 0.0585 | 9 |
| 132928 | 0.0223 | 3 |
Top tissues by expression
291 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| left testis | UBERON:0004533 | 98.63 | gold quality |
| right testis | UBERON:0004534 | 98.62 | gold quality |
| testis | UBERON:0000473 | 97.44 | gold quality |
| calcaneal tendon | UBERON:0003701 | 97.26 | gold quality |
| decidua | UBERON:0002450 | 96.71 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 96.28 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 95.65 | gold quality |
| lower esophagus | UBERON:0013473 | 95.64 | gold quality |
| tendon | UBERON:0000043 | 95.60 | gold quality |
| spinal cord | UBERON:0002240 | 95.59 | gold quality |
| sperm | CL:0000019 | 95.56 | gold quality |
| adult organism | UBERON:0007023 | 95.24 | gold quality |
| popliteal artery | UBERON:0002250 | 95.23 | gold quality |
| tibial artery | UBERON:0007610 | 95.23 | gold quality |
| left coronary artery | UBERON:0001626 | 95.13 | gold quality |
| male germ cell | CL:0000015 | 94.99 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 94.98 | gold quality |
| aorta | UBERON:0000947 | 94.94 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 94.83 | gold quality |
| right coronary artery | UBERON:0001625 | 94.79 | gold quality |
| adenohypophysis | UBERON:0002196 | 94.70 | gold quality |
| thoracic aorta | UBERON:0001515 | 94.68 | gold quality |
| ascending aorta | UBERON:0001496 | 94.64 | gold quality |
| caudate nucleus | UBERON:0001873 | 94.59 | gold quality |
| corpus callosum | UBERON:0002336 | 94.59 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 94.59 | gold quality |
| nucleus accumbens | UBERON:0001882 | 94.53 | gold quality |
| coronary artery | UBERON:0001621 | 94.49 | gold quality |
| rectum | UBERON:0001052 | 94.40 | gold quality |
| amygdala | UBERON:0001876 | 94.39 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-134144 | yes | 27.88 |
| E-MTAB-6058 | no | 203.67 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
21 targeting WASHC3, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-126-5P | 100.00 | 72.71 | 3180 |
| HSA-MIR-302C-5P | 99.97 | 72.56 | 3642 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-380-3P | 99.89 | 70.18 | 1978 |
| HSA-MIR-548AR-3P | 99.85 | 71.26 | 3889 |
| HSA-MIR-548AZ-3P | 99.82 | 70.56 | 3549 |
| HSA-MIR-548BC | 99.82 | 70.61 | 3524 |
| HSA-MIR-548E-3P | 99.82 | 70.59 | 3514 |
| HSA-MIR-548F-3P | 99.82 | 70.59 | 3540 |
| HSA-MIR-548A-3P | 99.76 | 70.58 | 3524 |
| HSA-MIR-548AV-3P | 99.43 | 68.50 | 1721 |
| HSA-MIR-100-3P | 99.20 | 67.33 | 672 |
| HSA-MIR-5008-5P | 98.42 | 65.87 | 1019 |
| HSA-MIR-484 | 98.16 | 66.92 | 1074 |
| HSA-MIR-3155A | 98.16 | 66.09 | 965 |
| HSA-MIR-3155B | 98.16 | 66.09 | 965 |
| HSA-MIR-4736 | 97.96 | 65.89 | 1287 |
| HSA-MIR-600 | 97.07 | 66.73 | 1259 |
| HSA-MIR-7108-5P | 96.42 | 66.17 | 598 |
| HSA-MIR-6851-3P | 95.73 | 65.11 | 688 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 17.1% of screened cell lines.
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | washc3 | ENSDARG00000045563 |
| mus_musculus | Washc3 | ENSMUSG00000020056 |
| rattus_norvegicus | Washc3 | ENSRNOG00000005102 |
| drosophila_melanogaster | CCDC53 | FBGN0031979 |
| caenorhabditis_elegans | WBGENE00019125 |
Protein
Protein identifiers
WASH complex subunit 3 — Q9Y3C0 (reviewed: Q9Y3C0)
Alternative names: Coiled-coil domain-containing protein 53
All UniProt accessions (8): F5GWI9, F5GXZ4, F5GXZ7, F5GZ97, F5H0A7, F5H2P1, Q9Y3C0, H0YGN0
UniProt curated annotations — full annotation on UniProt →
Function. Acts as a component of the WASH core complex that functions as a nucleation-promoting factor (NPF) at the surface of endosomes, where it recruits and activates the Arp2/3 complex to induce actin polymerization, playing a key role in the fission of tubules that serve as transport intermediates during endosome sorting.
Subunit / interactions. Component of the WASH core complex also described as WASH regulatory complex (SHRC) composed of WASH (WASHC1, WASH2P or WASH3P), WASHC2 (WASHC2A or WASHC2C), WASHC3, WASHC4 and WASHC5. The WASH core complex associates via WASHC2 with the F-actin-capping protein dimer (formed by CAPZA1, CAPZA2 or CAPZA3 and CAPZB) in a transient or substoichiometric manner which was initially described as WASH complex.
Subcellular location. Early endosome.
Similarity. Belongs to the CCDC53 family.
RefSeq proteins (2): NP_001288036, NP_057137* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR019309 | WASHC3 | Family |
Pfam: PF10152
UniProt features (8 total): region of interest 2, sequence conflict 2, chain 1, coiled-coil region 1, compositionally biased region 1, modified residue 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9Y3C0-F1 | 70.96 | 0.27 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (1): 1
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 149 (showing top):
GOBP_REGULATION_OF_ACTIN_NUCLEATION, GOBP_VESICLE_MEDIATED_TRANSPORT, GOBP_REGULATION_OF_ACTIN_FILAMENT_BASED_PROCESS, TERAMOTO_OPN_TARGETS_CLUSTER_5, CAIRO_HEPATOBLASTOMA_CLASSES_DN, GOBP_EXOCYTOSIS, GOBP_ACTIN_FILAMENT_ORGANIZATION, GOBP_SECRETION, GOBP_REGULATION_OF_ARP2_3_COMPLEX_MEDIATED_ACTIN_NUCLEATION, LIU_CMYB_TARGETS_UP, GOBP_ARP2_3_COMPLEX_MEDIATED_ACTIN_NUCLEATION, GOBP_ACTIN_NUCLEATION, LIU_VMYB_TARGETS_UP, GOBP_REGULATION_OF_CYTOSKELETON_ORGANIZATION, CHIANG_LIVER_CANCER_SUBCLASS_CTNNB1_UP
GO Biological Process (5): exocytosis (GO:0006887), protein transport (GO:0015031), endosomal transport (GO:0016197), actin filament polymerization (GO:0030041), regulation of Arp2/3 complex-mediated actin nucleation (GO:0034315)
GO Molecular Function (1): protein binding (GO:0005515)
GO Cellular Component (5): early endosome membrane (GO:0031901), WASH complex (GO:0071203), cytoplasm (GO:0005737), endosome (GO:0005768), early endosome (GO:0005769)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| vesicle-mediated transport | 2 |
| secretion by cell | 1 |
| vesicle fusion to plasma membrane | 1 |
| transport | 1 |
| intracellular protein localization | 1 |
| establishment of protein localization | 1 |
| intracellular transport | 1 |
| actin polymerization or depolymerization | 1 |
| protein polymerization | 1 |
| Arp2/3 complex-mediated actin nucleation | 1 |
| regulation of actin nucleation | 1 |
| binding | 1 |
| early endosome | 1 |
| endosome membrane | 1 |
| cytoplasm | 1 |
| protein-containing complex | 1 |
| intracellular anatomical structure | 1 |
| cellular anatomical structure | 1 |
| endomembrane system | 1 |
| cytoplasmic vesicle | 1 |
| endosome | 1 |
Protein interactions and networks
STRING
794 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| WASHC3 | WASHC5 | Q12768 | 998 |
| WASHC3 | WASHC4 | Q2M389 | 998 |
| WASHC3 | WASHC1 | A8K0Z3 | 997 |
| WASHC3 | WASHC2C | Q9Y4E1 | 954 |
| WASHC3 | WAS | P42768 | 758 |
| WASHC3 | WASHC2A | Q641Q2 | 691 |
| WASHC3 | VPS35 | Q96QK1 | 681 |
| WASHC3 | CCDC22 | O60826 | 649 |
| WASHC3 | VPS29 | Q9UBQ0 | 644 |
| WASHC3 | SNX27 | Q96L92 | 632 |
| WASHC3 | VPS26A | O75436 | 621 |
| WASHC3 | CCDC93 | Q567U6 | 621 |
| WASHC3 | SNX1 | Q13596 | 599 |
| WASHC3 | BRK1 | Q8WUW1 | 583 |
| WASHC3 | SNX2 | P82862 | 544 |
IntAct
300 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| OPTN | WASHC3 | psi-mi:“MI:0915”(physical association) | 0.950 |
| WASHC3 | OPTN | psi-mi:“MI:0915”(physical association) | 0.950 |
| WASHC3 | HSBP1 | psi-mi:“MI:0915”(physical association) | 0.940 |
| HSBP1 | WASHC3 | psi-mi:“MI:0915”(physical association) | 0.940 |
| WASHC3 | MCRS1 | psi-mi:“MI:0915”(physical association) | 0.880 |
| MCRS1 | WASHC3 | psi-mi:“MI:0915”(physical association) | 0.880 |
| WASHC3 | NDC80 | psi-mi:“MI:0915”(physical association) | 0.870 |
| NUP62 | WASHC3 | psi-mi:“MI:0915”(physical association) | 0.870 |
| WASHC3 | NUP62 | psi-mi:“MI:0915”(physical association) | 0.870 |
| NDC80 | WASHC3 | psi-mi:“MI:0915”(physical association) | 0.870 |
BioGRID (240): CCDC53 (Two-hybrid), CCDC53 (Two-hybrid), CCDC53 (Two-hybrid), CCDC53 (Two-hybrid), CCDC53 (Two-hybrid), CCDC53 (Two-hybrid), CCDC53 (Two-hybrid), CCDC53 (Two-hybrid), CCDC53 (Two-hybrid), CCHCR1 (Two-hybrid), CEP55 (Two-hybrid), DTNBP1 (Two-hybrid), IFT20 (Two-hybrid), MOB1B (Two-hybrid), SYCE1 (Two-hybrid)
ESM2 similar proteins: A0AUQ6, A2BE76, O14645, O18973, O35427, O35473, O55003, O88447, O88597, P50503, Q05B58, Q12983, Q13901, Q14457, Q14AM7, Q14CZ0, Q28HY5, Q32KN2, Q32PE4, Q4A1L3, Q4A1L4, Q4A1L5, Q4R3K5, Q4R8N2, Q4RLT3, Q52LA3, Q5JSJ4, Q5NVP8, Q5R878, Q5RBU4, Q5TKA1, Q5ZHS3, Q5ZJQ3, Q68FJ8, Q6DKA1, Q6GMH0, Q6GP52, Q6PAX8, Q6X4M3, Q7TSU0
Diamond homologs: B5X3I1, Q05B58, Q55FU3, Q5RGJ6, Q6DKA1, Q9CR27, Q9VLT8, Q9Y3C0, O01901
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| WASHC3 | “form complex” | “WASH complex” | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 61 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Golgi Associated Vesicle Biogenesis | 5 | 25.0× | 4e-04 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| cilium assembly | 6 | 8.3× | 4e-03 |
| protein transport | 7 | 5.8× | 7e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
29 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 20 |
| Likely benign | 1 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1274 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 12:102025972:A:AC | donor_gain | 1.0000 |
| 12:102025973:C:CT | donor_gain | 1.0000 |
| 12:102025973:CT:C | donor_gain | 1.0000 |
| 12:102026035:CACC:C | acceptor_gain | 1.0000 |
| 12:102026037:CC:C | acceptor_gain | 1.0000 |
| 12:102026038:CC:C | acceptor_gain | 1.0000 |
| 12:102026039:C:CA | acceptor_loss | 1.0000 |
| 12:102039976:CTG:C | acceptor_gain | 1.0000 |
| 12:102044100:CTTA:C | donor_gain | 1.0000 |
| 12:102044101:TTAC:T | donor_loss | 1.0000 |
| 12:102044101:TTACC:T | donor_gain | 1.0000 |
| 12:102044102:TAC:T | donor_loss | 1.0000 |
| 12:102044102:TACCT:T | donor_gain | 1.0000 |
| 12:102044103:A:AC | donor_gain | 1.0000 |
| 12:102044103:AC:A | donor_gain | 1.0000 |
| 12:102044103:ACCTG:A | donor_gain | 1.0000 |
| 12:102044104:C:CT | donor_gain | 1.0000 |
| 12:102044104:CC:C | donor_gain | 1.0000 |
| 12:102044104:CCT:C | donor_gain | 1.0000 |
| 12:102044104:CCTG:C | donor_gain | 1.0000 |
| 12:102044104:CCTGT:C | donor_gain | 1.0000 |
| 12:102044208:GACAA:G | acceptor_gain | 1.0000 |
| 12:102044209:ACAA:A | acceptor_gain | 1.0000 |
| 12:102044210:CAA:C | acceptor_gain | 1.0000 |
| 12:102044210:CAAC:C | acceptor_gain | 1.0000 |
| 12:102044211:AA:A | acceptor_gain | 1.0000 |
| 12:102044213:C:CC | acceptor_gain | 1.0000 |
| 12:102046050:CAAC:C | donor_loss | 1.0000 |
| 12:102046051:AACC:A | donor_loss | 1.0000 |
| 12:102046053:C:CA | donor_loss | 1.0000 |
AlphaMissense
1266 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 12:102039878:A:G | M142T | 1.000 |
| 12:102046073:A:G | L66P | 1.000 |
| 12:102026007:A:C | M156R | 0.999 |
| 12:102026007:A:T | M156K | 0.999 |
| 12:102026009:T:A | K155N | 0.999 |
| 12:102026009:T:G | K155N | 0.999 |
| 12:102026011:T:C | K155E | 0.999 |
| 12:102026019:A:T | I152K | 0.999 |
| 12:102026034:A:T | V147E | 0.999 |
| 12:102039877:C:A | M142I | 0.999 |
| 12:102039877:C:G | M142I | 0.999 |
| 12:102039877:C:T | M142I | 0.999 |
| 12:102039878:A:C | M142R | 0.999 |
| 12:102039878:A:T | M142K | 0.999 |
| 12:102044211:A:G | L73S | 0.999 |
| 12:102046059:C:G | A71P | 0.999 |
| 12:102061276:A:G | L41P | 0.999 |
| 12:102026007:A:G | M156T | 0.998 |
| 12:102026019:A:C | I152R | 0.998 |
| 12:102026022:G:T | A151E | 0.998 |
| 12:102026034:A:G | V147A | 0.998 |
| 12:102026037:C:T | G146D | 0.998 |
| 12:102039888:A:C | Y139D | 0.998 |
| 12:102039897:A:C | Y136D | 0.998 |
| 12:102044206:A:G | S75P | 0.998 |
| 12:102046115:A:G | L52P | 0.998 |
| 12:102061299:A:C | F33L | 0.998 |
| 12:102061299:A:T | F33L | 0.998 |
| 12:102061301:A:G | F33L | 0.998 |
| 12:102061309:A:G | L30P | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000012587 (12:102051213 CG>C), RS1000015909 (12:102041551 A>G), RS1000057977 (12:102048710 T>A,C), RS1000088568 (12:102048987 T>C), RS1000184166 (12:102028631 T>C), RS1000198353 (12:102020644 T>G), RS1000246267 (12:102044432 A>G), RS1000269613 (12:102014552 T>C), RS1000308032 (12:102020997 G>A), RS1000359568 (12:102055902 G>A), RS1000404136 (12:102037152 G>C), RS1000414329 (12:102062435 T>A), RS1000419864 (12:102014222 G>A), RS1000467866 (12:102059544 G>A), RS1000499486 (12:102042926 T>C)
Disease associations
OMIM: gene MIM:619925 | disease phenotypes:
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| neurodevelopmental disorder | Limited | Autosomal dominant |
Mondo (1): neurodevelopmental disorder (MONDO:0700092)
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
5 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST010703_2 | Brain morphology (MOSTest) | 3.000000e-37 |
| GCST012227_547 | Hip circumference adjusted for BMI | 2.000000e-08 |
| GCST90000025_988 | Appendicular lean mass | 1.000000e-25 |
| GCST90000025_989 | Appendicular lean mass | 2.000000e-17 |
| GCST90020028_1677 | Hip circumference adjusted for BMI | 4.000000e-11 |
EFO canonical traits (3, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004346 | neuroimaging measurement |
| EFO:0008039 | BMI-adjusted hip circumference |
| EFO:0004980 | appendicular lean mass |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D065886 | Neurodevelopmental Disorders | F03.625 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
36 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | increases expression, affects expression | 3 |
| Air Pollutants | decreases expression, affects cotreatment, increases abundance, increases oxidation | 2 |
| ginger extract | affects cotreatment, affects expression, increases abundance | 1 |
| dicrotophos | decreases expression | 1 |
| methylmercuric chloride | decreases expression | 1 |
| alpha-pinene | affects cotreatment, increases oxidation, increases abundance | 1 |
| bisphenol A | increases abundance, affects cotreatment, affects expression | 1 |
| beta-lapachone | decreases expression, increases expression | 1 |
| arsenite | affects binding, increases reaction | 1 |
| cobaltous chloride | decreases expression | 1 |
| methacrylaldehyde | affects cotreatment, increases oxidation, increases abundance | 1 |
| beta-methylcholine | affects expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| ICG 001 | increases expression | 1 |
| 3-(2-hydroxy-4-(2-methylnonan-2-yl)phenyl)cyclohexan-1-ol | decreases expression | 1 |
| Sunitinib | decreases expression | 1 |
| Vorinostat | increases expression | 1 |
| Acrolein | affects cotreatment, increases oxidation, increases abundance | 1 |
| Benzo(a)pyrene | increases expression | 1 |
| Doxorubicin | decreases expression | 1 |
| Ethyl Methanesulfonate | increases expression | 1 |
| Formaldehyde | increases expression | 1 |
| Ivermectin | decreases expression | 1 |
| Methyl Methanesulfonate | increases expression | 1 |
| Mitoxantrone | affects response to substance | 1 |
| Oils, Volatile | affects cotreatment, affects expression, increases abundance | 1 |
| Ozone | affects cotreatment, increases oxidation, increases abundance | 1 |
| Selenium | decreases expression | 1 |
| Thiram | decreases expression | 1 |
| Cyclosporine | decreases expression | 1 |
Cellosaurus cell lines
3 cell lines: 3 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_SH21 | HAP1 CCDC53 (-) 1 | Cancer cell line | Male |
| CVCL_SH22 | HAP1 CCDC53 (-) 2 | Cancer cell line | Male |
| CVCL_SH23 | HAP1 CCDC53 (-) 3 | Cancer cell line | Male |
Clinical trials (associated diseases)
202 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT04586348 | PHASE4 | UNKNOWN | Prenatal Iodine Supplementation and Early Childhood Neurodevelopment |
| NCT04873115 | PHASE4 | UNKNOWN | Double-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties, |
| NCT02559102 | PHASE3 | COMPLETED | Dexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants |
| NCT02757079 | PHASE3 | COMPLETED | Study of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders |
| NCT06915480 | PHASE3 | RECRUITING | Reducing Missed Appointments |
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Related Atlas pages
- Associated diseases: neurodevelopmental disorder