WDTC1-DT

Summary

WDTC1-DT (WDTC1 divergent transcript, HGNC:55858) is a long non-coding RNA gene on chromosome 1p36.11.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55858
Approved symbol	WDTC1-DT
Name	WDTC1 divergent transcript
Location	1p36.11
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224311
Ensembl biotype	lncRNA
Entrez	105376890
RNAcentral	URS0002A23E55 — lncRNA, 805 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000425205, ENST00000722214, ENST00000722215, ENST00000722216, ENST00000722217, ENST00000722218

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000425205 — 3 exons

Exon	Start	End
ENSE00001618851	27234262	27234352
ENSE00001621358	27229106	27229235
ENSE00001739728	27233445	27233602

Expression profiles

Bgee: expression breadth ubiquitous, 102 present calls, max score 86.00.

Top tissues by expression

102 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.00	silver quality
sural nerve	UBERON:0015488	84.35	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	69.69	gold quality
cortical plate	UBERON:0005343	68.48	gold quality
skeletal muscle tissue	UBERON:0001134	63.12	gold quality
bone marrow	UBERON:0002371	62.66	gold quality
islet of Langerhans	UBERON:0000006	61.64	gold quality
left testis	UBERON:0004533	59.62	gold quality
testis	UBERON:0000473	59.42	gold quality
right testis	UBERON:0004534	58.74	gold quality
calcaneal tendon	UBERON:0003701	57.57	gold quality
blood	UBERON:0000178	55.75	gold quality
monocyte	CL:0000576	54.57	gold quality
muscle of leg	UBERON:0001383	53.66	gold quality
descending thoracic aorta	UBERON:0002345	53.38	gold quality
tonsil	UBERON:0002372	52.48	gold quality
gastrocnemius	UBERON:0001388	52.36	gold quality
right coronary artery	UBERON:0001625	52.25	gold quality
endometrium	UBERON:0001295	51.38	silver quality
adrenal tissue	UBERON:0018303	51.10	gold quality
liver	UBERON:0002107	50.83	gold quality
body of pancreas	UBERON:0001150	50.40	gold quality
heart left ventricle	UBERON:0002084	50.37	gold quality
corpus callosum	UBERON:0002336	50.03	silver quality
smooth muscle tissue	UBERON:0001135	49.08	gold quality
heart	UBERON:0000948	48.80	gold quality
tibial artery	UBERON:0007610	48.46	gold quality
amygdala	UBERON:0001876	48.42	gold quality
popliteal artery	UBERON:0002250	48.39	gold quality
right adrenal gland	UBERON:0001233	48.27	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.