WIPF1-AS1

Summary

WIPF1-AS1 (WIPF1 and CHRNA1 antisense RNA 1, HGNC:40613) is a long non-coding RNA gene on chromosome 2q31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40613
Approved symbol	WIPF1-AS1
Name	WIPF1 and CHRNA1 antisense RNA 1
Location	2q31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237798
Ensembl biotype	lncRNA
Entrez	139355214
RNAcentral	URS00002B944E — lncRNA, 457 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000454203

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000454203 — 2 exons

Exon	Start	End
ENSE00001708516	174587473	174587726
ENSE00001738588	174575227	174575429

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 95.35.

Top tissues by expression

114 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	95.35	gold quality
bone marrow cell	CL:0002092	70.61	gold quality
granulocyte	CL:0000094	69.20	gold quality
blood	UBERON:0000178	68.03	gold quality
bone marrow	UBERON:0002371	67.27	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.91	gold quality
colonic epithelium	UBERON:0000397	65.61	silver quality
monocyte	CL:0000576	65.42	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	64.55	gold quality
calcaneal tendon	UBERON:0003701	63.42	gold quality
prefrontal cortex	UBERON:0000451	62.79	gold quality
smooth muscle tissue	UBERON:0001135	60.88	gold quality
gall bladder	UBERON:0002110	60.58	gold quality
tonsil	UBERON:0002372	59.63	gold quality
primary visual cortex	UBERON:0002436	59.57	gold quality
vermiform appendix	UBERON:0001154	58.83	gold quality
lymph node	UBERON:0000029	57.73	gold quality
frontal cortex	UBERON:0001870	56.81	gold quality
islet of Langerhans	UBERON:0000006	55.52	gold quality
substantia nigra	UBERON:0002038	55.14	gold quality
placenta	UBERON:0001987	54.86	gold quality
superior frontal gyrus	UBERON:0002661	52.04	gold quality
liver	UBERON:0002107	51.26	silver quality
cerebral cortex	UBERON:0000956	51.21	gold quality
upper lobe of left lung	UBERON:0008952	50.91	gold quality
spleen	UBERON:0002106	50.69	gold quality
lung	UBERON:0002048	50.48	gold quality
multicellular organism	UBERON:0000468	49.73	gold quality
right lobe of liver	UBERON:0001114	49.73	gold quality
Ammon’s horn	UBERON:0001954	49.42	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.21

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.