XXYLT1-AS1

Summary

XXYLT1-AS1 (XXYLT1 antisense RNA 1, HGNC:41153) is a long non-coding RNA gene on chromosome 3q29.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41153
Approved symbol	XXYLT1-AS1
Name	XXYLT1 antisense RNA 1
Location	3q29
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233303
Ensembl biotype	lncRNA
Entrez	100874528
RNAcentral	URS00002E0E18 — lncRNA, 431 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000458531

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000458531 — 4 exons

Exon	Start	End
ENSE00001613043	195095285	195095377
ENSE00001742803	195095599	195095707
ENSE00001766380	195095920	195096057
ENSE00001770660	195094588	195094678

Expression profiles

Bgee: expression breadth broad, 97 present calls, max score 65.16.

Top tissues by expression

97 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ganglionic eminence	UBERON:0004023	65.16	gold quality
hindlimb stylopod muscle	UBERON:0004252	64.40	gold quality
skeletal muscle tissue	UBERON:0001134	62.01	gold quality
sural nerve	UBERON:0015488	61.23	gold quality
duodenum	UBERON:0002114	61.15	gold quality
lymph node	UBERON:0000029	60.41	gold quality
monocyte	CL:0000576	59.11	gold quality
tonsil	UBERON:0002372	57.41	gold quality
bone marrow	UBERON:0002371	55.88	gold quality
right uterine tube	UBERON:0001302	55.35	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	54.70	gold quality
islet of Langerhans	UBERON:0000006	54.16	gold quality
smooth muscle tissue	UBERON:0001135	53.48	gold quality
kidney	UBERON:0002113	52.88	gold quality
cortex of kidney	UBERON:0001225	52.20	gold quality
urinary bladder	UBERON:0001255	51.96	gold quality
primary visual cortex	UBERON:0002436	51.75	gold quality
calcaneal tendon	UBERON:0003701	51.59	silver quality
metanephros cortex	UBERON:0010533	51.42	gold quality
blood	UBERON:0000178	51.40	silver quality
adult mammalian kidney	UBERON:0000082	51.11	gold quality
fallopian tube	UBERON:0003889	51.04	gold quality
heart left ventricle	UBERON:0002084	50.91	gold quality
muscle of leg	UBERON:0001383	50.21	gold quality
rectum	UBERON:0001052	49.59	gold quality
gastrocnemius	UBERON:0001388	49.15	gold quality
myometrium	UBERON:0001296	48.80	gold quality
heart	UBERON:0000948	47.20	gold quality
esophagus mucosa	UBERON:0002469	46.78	gold quality
prefrontal cortex	UBERON:0000451	46.37	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.65

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.