YAE1-DT

Summary

YAE1-DT (YAE1 divergent transcript, HGNC:55820) is a long non-coding RNA gene on chromosome 7p14.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55820
Approved symbol	YAE1-DT
Name	YAE1 divergent transcript
Location	7p14.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227172
Ensembl biotype	lncRNA
Entrez	105375240
RNAcentral	URS00026A1F30 — lncRNA, 617 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 30 — 30 lncRNA

ENST00000439751, ENST00000728956, ENST00000728957, ENST00000728958, ENST00000728959, ENST00000728960, ENST00000728961, ENST00000728962, ENST00000728963, ENST00000728964, ENST00000728965, ENST00000728966, ENST00000728967, ENST00000728968, ENST00000728969, ENST00000728970, ENST00000728971, ENST00000728972, ENST00000728973, ENST00000728974, ENST00000728975, ENST00000728976, ENST00000728977, ENST00000728978, ENST00000728979, ENST00000728980, ENST00000728981, ENST00000728982, ENST00000728983, ENST00000728984

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000439751 — 3 exons

Exon	Start	End
ENSE00001604846	39553876	39553944
ENSE00004055973	39566143	39566373
ENSE00004055977	39545442	39545893

Expression profiles

Bgee: expression breadth ubiquitous, 103 present calls, max score 87.24.

Top tissues by expression

103 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.24	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	67.39	gold quality
lymph node	UBERON:0000029	65.21	gold quality
skeletal muscle tissue	UBERON:0001134	62.98	gold quality
bone marrow	UBERON:0002371	61.07	gold quality
islet of Langerhans	UBERON:0000006	59.34	gold quality
prefrontal cortex	UBERON:0000451	58.75	gold quality
urinary bladder	UBERON:0001255	58.62	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	57.16	gold quality
right testis	UBERON:0004534	56.43	gold quality
testis	UBERON:0000473	56.22	gold quality
muscle of leg	UBERON:0001383	56.09	gold quality
left testis	UBERON:0004533	56.06	gold quality
monocyte	CL:0000576	55.93	gold quality
superior frontal gyrus	UBERON:0002661	55.67	gold quality
calcaneal tendon	UBERON:0003701	55.05	silver quality
gastrocnemius	UBERON:0001388	54.95	gold quality
adult mammalian kidney	UBERON:0000082	54.48	gold quality
right adrenal gland	UBERON:0001233	54.35	gold quality
primary visual cortex	UBERON:0002436	53.51	gold quality
blood	UBERON:0000178	52.99	gold quality
right adrenal gland cortex	UBERON:0035827	52.85	gold quality
right lobe of liver	UBERON:0001114	52.15	gold quality
liver	UBERON:0002107	52.11	gold quality
kidney	UBERON:0002113	51.93	gold quality
cortex of kidney	UBERON:0001225	51.53	gold quality
apex of heart	UBERON:0002098	51.51	gold quality
frontal cortex	UBERON:0001870	51.11	gold quality
fallopian tube	UBERON:0003889	50.99	gold quality
Ammon’s horn	UBERON:0001954	50.62	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.