YWHAG
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Also known as PPP1R17014-3-3GAMMA14-3-3γ
Summary
YWHAG (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma, HGNC:12852) is a protein-coding gene on chromosome 7q11.23, encoding 14-3-3 protein gamma (P61981). Adapter protein implicated in the regulation of a large spectrum of both general and specialized signaling pathways.
This gene product belongs to the 14-3-3 family of proteins which mediate signal transduction by binding to phosphoserine-containing proteins. This highly conserved protein family is found in both plants and mammals, and this protein is 100% identical to the rat ortholog. It is induced by growth factors in human vascular smooth muscle cells, and is also highly expressed in skeletal and heart muscles, suggesting an important role for this protein in muscle tissue. It has been shown to interact with RAF1 and protein kinase C, proteins involved in various signal transduction pathways.
Source: NCBI Gene 7532 — RefSeq curated summary.
At a glance
- Gene–disease (curated): developmental and epileptic encephalopathy, 56 (Definitive, GenCC) — +1 more curated relationship
- GWAS associations: 3
- Clinical variants (ClinVar): 238 total — 21 pathogenic, 8 likely-pathogenic
- Phenotypes (HPO): 63
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_012479
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:12852 |
| Approved symbol | YWHAG |
| Name | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma |
| Location | 7q11.23 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | PPP1R170, 14-3-3GAMMA, 14-3-3γ |
| Ensembl gene | ENSG00000170027 |
| Ensembl biotype | protein_coding |
| OMIM | 605356 |
| Entrez | 7532 |
Gene structure
Transcript identifiers
Ensembl transcripts: 1 — 1 protein_coding
ENST00000307630
RefSeq mRNA: 1 — MANE Select: NM_012479
NM_012479
CCDS: CCDS5584
Canonical transcript exons
ENST00000307630 — 2 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001127710 | 76326799 | 76330233 |
| ENSE00001762086 | 76358722 | 76358991 |
Expression profiles
Bgee: expression breadth ubiquitous, 266 present calls, max score 99.96.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 110.1311 / max 973.0210, expressed in 1827 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 84437 | 69.8471 | 1825 |
| 84438 | 24.8084 | 1816 |
| 84436 | 15.4756 | 1799 |
Top tissues by expression
266 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| lateral nuclear group of thalamus | UBERON:0002736 | 99.96 | gold quality |
| pons | UBERON:0000988 | 99.93 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 99.93 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 99.92 | gold quality |
| dorsal root ganglion | UBERON:0000044 | 99.91 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 99.88 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 99.88 | gold quality |
| endothelial cell | CL:0000115 | 99.87 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 99.87 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 99.87 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 99.86 | gold quality |
| parietal lobe | UBERON:0001872 | 99.85 | gold quality |
| postcentral gyrus | UBERON:0002581 | 99.84 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 99.82 | gold quality |
| tibialis anterior | UBERON:0001385 | 99.79 | gold quality |
| medulla oblongata | UBERON:0001896 | 99.79 | gold quality |
| entorhinal cortex | UBERON:0002728 | 99.79 | gold quality |
| ventral tegmental area | UBERON:0002691 | 99.75 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 99.75 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 99.73 | gold quality |
| trigeminal ganglion | UBERON:0001675 | 99.68 | gold quality |
| occipital lobe | UBERON:0002021 | 99.67 | gold quality |
| deltoid | UBERON:0001476 | 99.66 | gold quality |
| oviduct epithelium | UBERON:0004804 | 99.64 | gold quality |
| primary visual cortex | UBERON:0002436 | 99.61 | gold quality |
| cortical plate | UBERON:0005343 | 99.58 | gold quality |
| vastus lateralis | UBERON:0001379 | 99.57 | gold quality |
| dorsal plus ventral thalamus | UBERON:0001897 | 99.52 | gold quality |
| ileal mucosa | UBERON:0000331 | 99.51 | gold quality |
| quadriceps femoris | UBERON:0001377 | 99.50 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-35 | yes | 56.95 |
| E-ANND-3 | yes | 8.37 |
| E-HCAD-25 | yes | 7.47 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): CXXC1, TCF3, TP53
miRNA regulators (miRDB)
205 targeting YWHAG, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-200B-3P | 100.00 | 73.31 | 2693 |
| HSA-MIR-200C-3P | 100.00 | 73.35 | 2685 |
| HSA-MIR-429 | 100.00 | 73.44 | 2698 |
| HSA-MIR-4747-5P | 100.00 | 67.90 | 2681 |
| HSA-MIR-5196-5P | 100.00 | 67.98 | 2761 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-181A-5P | 99.99 | 72.96 | 2995 |
| HSA-MIR-181B-5P | 99.99 | 72.97 | 2996 |
| HSA-MIR-181C-5P | 99.99 | 72.95 | 2996 |
| HSA-MIR-181D-5P | 99.99 | 73.04 | 2997 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-433-3P | 99.98 | 69.37 | 1203 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-8068 | 99.98 | 73.85 | 2376 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-548AJ-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548X-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-4487 | 99.96 | 64.58 | 1252 |
| HSA-MIR-96-5P | 99.95 | 72.80 | 2140 |
| HSA-MIR-23A-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23B-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23C | 99.95 | 73.92 | 3192 |
| HSA-MIR-651-3P | 99.94 | 73.48 | 5177 |
Literature-anchored findings (GeneRIF, showing 40)
- Aberrant expression of signaling-related proteins 14-3-3 gamma and RACK1 in fetal Down syndrome brain (trisomy 21). (PMID:11824616)
- Results show that three 14-3-3 isoforms, beta, gamma and eta, are DAL-1/Protein 4.1B-binding proteins. (PMID:11996670)
- TSC2 associates with 14-3-3 in vivo (PMID:12364343)
- 14-3-3 binds to the IGF-1 receptor after IGF1R’s serine autophosphorylation (PMID:12482592)
- 14-3-3 suppresses importin alpha/beta-dependent nuclear localization of Thr157-phosphorylated p27, suggesting implications for cell cycle disorder in Akt-activated cancer cells. (PMID:15057270)
- multiple interactions of AICD with FE65 and 14-3-3gamma modulate FE65-dependent gene transactivation (PMID:16223726)
- Interaction of human 14-3-3gamma with the small heat shock protein Hsp20 was analyzed by means of size-exclusion chromatography and chemical crosslinking. (PMID:17109079)
- Both single marker and haplotype analyses were negative for the Ywhag gene association with smoking initiation and nicotine dependence. (PMID:17284169)
- our data indicate that 14-3-3gamma may contribute to tumorigenesis by promoting genomic instability. (PMID:17394238)
- Detection of only 2 (14-3-3 eta and gamma) out of 7 different isoforms in synovial fluid suggests they are specific to the site of joint inflammation (PMID:17611984)
- Report reduced expression of 14-3-3 gamma in uterine leiomyoma as identified by proteomics. (PMID:18054924)
- human 14-3-3gamma binds to the ERK1/2 molecular scaffold KSR1, which is mediated by the C-terminal stretch of 14-3-3gamma (PMID:18426801)
- These results suggest that the override of checkpoint observed in 14-3-3gamma knockdown cells is due to failure to inhibit cdc25C function. (PMID:18843201)
- This protein has been found differentially expressed in the temporal lobe from patients with schizophrenia. (PMID:19034380)
- changes in the expression of five 14-3-3 isoforms (beta, gamma, epsilon, tau, and zeta) during the apoptosis of JURL-MK1 and K562 cells. (PMID:19173300)
- 14-3-3beta, 14-3-3gamma, 14-3-3epsilon, 14-3-3eta and 14-3-3theta isoforms interact with the GPIb-IX complex in platelets (PMID:19558434)
- Abundant level of the phosphorylated FOXO1, its impaired nucleocytoplasmic shuttling, and the lowered expression of 14-3-3 protein in leiomyoma induces a shift in the cellular machinery toward a prosurvival execution program. (PMID:19772960)
- analysis of the interaction between 14-3-3 proteins, the N-terminal region of tyrosine hydroxylase, and negatively charged membranes (PMID:19801645)
- Zebrafish gene knockdowns imply roles for human YWHAG in infantile spasms and cardiomegaly. (PMID:20146355)
- This protein has been found differentially expressed in the anterior cingulate cortex from patients with schizophrenia (PMID:20381070)
- 14-3-3 eta, beta, gamma and sigma isoforms were negatively expressed in meningioma. (PMID:20388496)
- 14-3-3 protein gamma forms a complex with Checkpoint kinase 1 phosphorylated at Ser296, but not at ATR sites (Ser317 and Ser345). (PMID:20639859)
- Elevated expression of 14-3-3gamma in human hepatocellular carcinoma predicts extrahepatic metastasis and worse survival (PMID:20870266)
- data do not exclude the possibility that YWHAG loss of function is also sufficient to cause neurological phenotypes (PMID:21109226)
- a new role for 14-3-3gamma in protecting p21 from MDMX-mediated proteasomal turnover, which may partially account for DNA damage-induced elevation of p21 levels independent of p53. (PMID:21148311)
- Data indicate that gene analysis revealed an up-regulation of all four 14-3-3 isoforms beta, eta, gamma, and sigma. (PMID:21416292)
- results support that membrane binding involves the non-conserved, convex area of 14-3-3gamma, and that Trp residues do not intercalate in the bilayer. (PMID:21420405)
- Increased expression of 14-3-3 gamma in lung cancer coincides with loss of functional p53. (PMID:21867493)
- description of a protein complex that mediates carrier formation and contains budding and fission molecules, as well as other molecules, such as the adaptor protein 14-3-3gamma (PMID:22366688)
- miR-141/YWHAG and miR-520e/RAB11A are two potential miRNA/protein target pairs associated with severe obesity. (PMID:22537031)
- hypoxia can activate p53 through inactivation of MDMX by the ATR-Chk1-MDMX-14-3-3gamma pathway. (PMID:22556425)
- Increased expression of 14-3-3gamma in breast cancer is associated significantly with tumor progression and poor prognosis. (PMID:22658894)
- 14-3-3gamma protein binds strongly to long DNA targets and shows very strong preference for supercoiled DNA. (PMID:22856523)
- Using individual amino acid substitutions within the 14-3-3gamma VRII, we identified two residues required for and two contributing to the gamma-specific phenotypes. (PMID:23115241)
- The peripheral binding of 14-3-3gamma to membranes involves isoform-specific histidine residues. (PMID:23189152)
- high 14-3-3gamma expression is associated with poor survival in NPC patients. Thus, this study has identified that the 14-3-3gamma involves in the carcinogenesis of NPC. (PMID:23500129)
- Mitotic Plk1 activity is regulated not only by Plk1-Thr210 phosphorylation, but also by Plk1 binding to 14-3-3gamma following Plk1-Ser99 phosphorylation downstream of the PI3K-Akt signalling pathway. (PMID:23695676)
- 14-3-3gamma was induced in B cells by T-dependent and T-independent primary CSR-inducing stimuli in vitro. (PMID:23851690)
- physiological changes in phosphate anions concentration can modulate affinity and specificity of interaction of 14-3-3 with its multiple targets and therefore the actual phosphointeractome of 14-3-3. (PMID:23977325)
- The region surrounding pSer19 of Tyrosine hydroxylase adopts an extended conformation in the 14-3-3gamma-bound state, whereas adopts a bent conformation when free in solution. (PMID:24055376)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ywhag1 | ENSDARG00000067626 |
| danio_rerio | ywhag2 | ENSDARG00000071658 |
| mus_musculus | Ywhag | ENSMUSG00000051391 |
| rattus_norvegicus | Ywhag | ENSRNOG00000001436 |
| drosophila_melanogaster | 14-3-3epsilon | FBGN0020238 |
Paralogs (6): YWHAE (ENSG00000108953), YWHAH (ENSG00000128245), YWHAQ (ENSG00000134308), YWHAZ (ENSG00000164924), YWHAB (ENSG00000166913), SFN (ENSG00000175793)
Protein
Protein identifiers
14-3-3 protein gamma — P61981 (reviewed: P61981)
Alternative names: Protein kinase C inhibitor protein 1
All UniProt accessions (1): P61981
UniProt curated annotations — full annotation on UniProt →
Function. Adapter protein implicated in the regulation of a large spectrum of both general and specialized signaling pathways. Binds to a large number of partners, usually by recognition of a phosphoserine or phosphothreonine motif. Binding generally results in the modulation of the activity of the binding partner. Promotes inactivation of WDR24 component of the GATOR2 complex by binding to phosphorylated WDR24. Participates in the positive regulation of NMDA glutamate receptor activity by promoting the L-glutamate secretion through interaction with BEST1. Reduces keratinocyte intercellular adhesion, via interacting with PKP1 and sequestering it in the cytoplasm, thereby reducing its incorporation into desmosomes. Plays a role in mitochondrial protein catabolic process (also named MALM) that promotes the degradation of damaged proteins inside mitochondria.
Subunit / interactions. Homodimer. Part of a complex that contains DSG3, PKP1, YAP1 and YWHAG; the complex is required for localization of DSG3 and YAP1 to the cell membrane in keratinocytes. Interacts with SAMSN1. Interacts with RAF1, SSH1 and CRTC2/TORC2. Interacts with ABL1 (phosphorylated form); the interaction retains it in the cytoplasm. Interacts with GAB2. Interacts with MDM4 (phosphorylated); negatively regulates MDM4 activity toward TP53. Interacts with PKA-phosphorylated AANAT and SIRT2. Interacts with the ‘Thr-369’ phosphorylated form of DAPK2. Interacts with PI4KB, TBC1D22A and TBC1D22B. Interacts with SLITRK1. Interacts with LRRK2; this interaction is dependent on LRRK2 phosphorylation. Interacts with MARK2 and MARK3. Interacts with MEFV. Interacts with ENDOG, TSC2 and PIK3C3; interaction with ENDOG weakens its interaction with TSC2 and PIK3C3. Interacts with (phosphorylated) WDR24. Interacts with BEST1; this interaction promotes L-glutamate channel activity leading to the positive regulation of NMDA glutamate receptor activity through the L-glutamate secretion. Interacts with PKP1 (when phosphorylated); the interaction results in translocation of PKP1 to the cytoplasm and loss of intercellular adhesion in keratinocytes. Interacts with SPATA18/MIEAP (isoforms 1 and 2); a protein that also plays a role in MALM.
Subcellular location. Cytoplasm. Cytosol. Mitochondrion matrix.
Tissue specificity. Highly expressed in brain, skeletal muscle, and heart.
Post-translational modifications. Phosphorylated by various PKC isozymes.
Disease relevance. Developmental and epileptic encephalopathy 56 (DEE56) [MIM:617665] A form of epileptic encephalopathy, a heterogeneous group of severe early-onset epilepsies characterized by refractory seizures, neurodevelopmental impairment, and poor prognosis. Development is normal prior to seizure onset, after which cognitive and motor delays become apparent. DEE56 is an autosomal dominant condition. The disease is caused by variants affecting the gene represented in this entry.
Similarity. Belongs to the 14-3-3 family.
RefSeq proteins (1): NP_036611* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000308 | 14-3-3 | Family |
| IPR023409 | 14-3-3_CS | Conserved_site |
| IPR023410 | 14-3-3_domain | Domain |
| IPR036815 | 14-3-3_dom_sf | Homologous_superfamily |
Pfam: PF00244
UniProt features (48 total): sequence conflict 12, helix 11, modified residue 9, sequence variant 5, turn 4, chain 2, region of interest 2, site 2, initiator methionine 1
Structure
Experimental structures (PDB)
22 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 6S9K | X-RAY DIFFRACTION | 1.6 |
| 6ZBT | X-RAY DIFFRACTION | 1.8 |
| 3UZD | X-RAY DIFFRACTION | 1.86 |
| 6ZC9 | X-RAY DIFFRACTION | 1.9 |
| 6A5S | X-RAY DIFFRACTION | 2.1 |
| 4E2E | X-RAY DIFFRACTION | 2.25 |
| 7A6Y | X-RAY DIFFRACTION | 2.5 |
| 2B05 | X-RAY DIFFRACTION | 2.55 |
| 6GKF | X-RAY DIFFRACTION | 2.6 |
| 6BZD | X-RAY DIFFRACTION | 2.67 |
| 7A6R | X-RAY DIFFRACTION | 2.7 |
| 5D3E | X-RAY DIFFRACTION | 2.75 |
| 6SAD | X-RAY DIFFRACTION | 2.75 |
| 6FEL | X-RAY DIFFRACTION | 2.84 |
| 6GKG | X-RAY DIFFRACTION | 2.85 |
| 4O46 | X-RAY DIFFRACTION | 2.9 |
| 6BYJ | X-RAY DIFFRACTION | 2.9 |
| 6Y4K | X-RAY DIFFRACTION | 3 |
| 4J6S | X-RAY DIFFRACTION | 3.08 |
| 6Y6B | X-RAY DIFFRACTION | 3.08 |
| 6BYL | X-RAY DIFFRACTION | 3.35 |
| 9CI3 | ELECTRON MICROSCOPY | 3.96 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P61981-F1 | 94.57 | 0.90 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (2): 57 (interaction with phosphoserine on interacting protein); 132 (interaction with phosphoserine on interacting protein)
Post-translational modifications (9): 71, 133, 145, 215, 234, 235, 1, 2, 2
Function
Pathways and Gene Ontology
Reactome pathways
54 pathways
| ID | Pathway |
|---|---|
| R-HSA-111447 | Activation of BAD and translocation to mitochondria |
| R-HSA-1445148 | Translocation of SLC2A4 (GLUT4) to the plasma membrane |
| R-HSA-2565942 | Regulation of PLK1 Activity at G2/M Transition |
| R-HSA-380259 | Loss of Nlp from mitotic centrosomes |
| R-HSA-380270 | Recruitment of mitotic centrosome proteins and complexes |
| R-HSA-380284 | Loss of proteins required for interphase microtubule organization from the centrosome |
| R-HSA-380320 | Recruitment of NuMA to mitotic centrosomes |
| R-HSA-5620912 | Anchoring of the basal body to the plasma membrane |
| R-HSA-5625740 | RHO GTPases activate PKNs |
| R-HSA-5628897 | TP53 Regulates Metabolic Genes |
| R-HSA-75035 | Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex |
| R-HSA-8854518 | AURKA Activation by TPX2 |
| R-HSA-9614399 | Regulation of localization of FOXO transcription factors |
| R-HSA-9735871 | SARS-CoV-1 targets host intracellular signalling and regulatory pathways |
| R-HSA-9755779 | SARS-CoV-2 targets host intracellular signalling and regulatory pathways |
| R-HSA-9856649 | Transcriptional and post-translational regulation of MITF-M expression and activity |
| R-HSA-9929491 | SPOP-mediated proteasomal degradation of PD-L1(CD274) |
| R-HSA-109581 | Apoptosis |
| R-HSA-109606 | Intrinsic Pathway for Apoptosis |
| R-HSA-114452 | Activation of BH3-only proteins |
| R-HSA-1266738 | Developmental Biology |
| R-HSA-162582 | Signal Transduction |
| R-HSA-1640170 | Cell Cycle |
| R-HSA-1643685 | Disease |
| R-HSA-1852241 | Organelle biogenesis and maintenance |
| R-HSA-194315 | Signaling by Rho GTPases |
| R-HSA-195258 | RHO GTPase Effectors |
| R-HSA-199991 | Membrane Trafficking |
| R-HSA-212436 | Generic Transcription Pathway |
| R-HSA-3700989 | Transcriptional Regulation by TP53 |
MSigDB gene sets: 545 (showing top):
GOBP_REGULATION_OF_CELL_ACTIVATION, RNGTGGGC_UNKNOWN, GCM_MAP4K4, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, AP1_01, GOBP_POSITIVE_REGULATION_OF_ADAPTIVE_IMMUNE_RESPONSE, GOBP_REGULATION_OF_PHOSPHORYLATION, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, GOBP_NEGATIVE_REGULATION_OF_KINASE_ACTIVITY, MODULE_151, GOBP_REGULATION_OF_ADAPTIVE_IMMUNE_RESPONSE, REACTOME_G2_M_DNA_DAMAGE_CHECKPOINT, AAGCCAT_MIR135A_MIR135B, GOBP_PROTEIN_TARGETING, PID_NFAT_3PATHWAY
GO Biological Process (28): positive regulation of T cell mediated immune response to tumor cell (GO:0002842), negative regulation of protein kinase activity (GO:0006469), protein targeting (GO:0006605), signal transduction (GO:0007165), intracellular protein localization (GO:0008104), regulation of signal transduction (GO:0009966), positive regulation of cell-cell adhesion (GO:0022409), cellular response to insulin stimulus (GO:0032869), regulation of protein localization (GO:0032880), cellular response to glucose starvation (GO:0042149), regulation of neuron differentiation (GO:0045664), regulation of synaptic plasticity (GO:0048167), positive regulation of T cell activation (GO:0050870), negative regulation of TORC1 signaling (GO:1904262), cytoplasmic translation (GO:0002181), negative regulation of T cell mediated immune response to tumor cell (GO:0002841), SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146), cellular response to nutrient levels (GO:0031669), cellular response to amino acid starvation (GO:0034198), TORC1 signaling (GO:0038202), proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161), negative regulation of translational initiation (GO:0045947), positive regulation of translational initiation (GO:0045948), protein stabilization (GO:0050821), negative regulation of T cell activation (GO:0050868), protein localization to lysosome (GO:0061462), protein K6-linked ubiquitination (GO:0085020), positive regulation of TORC1 signaling (GO:1904263)
GO Molecular Function (10): RNA binding (GO:0003723), protein kinase C binding (GO:0005080), insulin-like growth factor receptor binding (GO:0005159), protein kinase C inhibitor activity (GO:0008426), protein domain specific binding (GO:0019904), receptor tyrosine kinase binding (GO:0030971), identical protein binding (GO:0042802), phosphorylation-dependent protein binding (GO:0140031), protein sequestering activity (GO:0140311), protein binding (GO:0005515)
GO Cellular Component (11): nucleus (GO:0005634), cytoplasm (GO:0005737), mitochondrial matrix (GO:0005759), cytosol (GO:0005829), focal adhesion (GO:0005925), membrane (GO:0016020), extracellular exosome (GO:0070062), presynapse (GO:0098793), mitochondrion (GO:0005739), vesicle (GO:0031982), synapse (GO:0045202)
Reactome top-level categories
Rollup of top-18 pathways:
| Category | Pathways |
|---|---|
| G2/M Transition | 2 |
| Centrosome maturation | 2 |
| Activation of BH3-only proteins | 1 |
| Membrane Trafficking | 1 |
| Loss of proteins required for interphase microtubule organization from the centrosome | 1 |
| Mitotic Prometaphase | 1 |
| Assembly of the 9+0 primary cilium | 1 |
| RHO GTPase Effectors | 1 |
| Transcriptional Regulation by TP53 | 1 |
| G2/M DNA damage checkpoint | 1 |
| FOXO-mediated transcription | 1 |
| SARS-CoV-1-host interactions | 1 |
| SARS-CoV-2-host interactions | 1 |
| MITF-M-regulated melanocyte development | 1 |
| Regulation of PD-L1(CD274) Post-translational modification | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| protein binding | 3 |
| T cell mediated immune response to tumor cell | 2 |
| regulation of T cell mediated immune response to tumor cell | 2 |
| cellular response to stimulus | 2 |
| cellular response to starvation | 2 |
| signaling receptor binding | 2 |
| intracellular membrane-bounded organelle | 2 |
| cytoplasm | 2 |
| positive regulation of T cell mediated immunity | 1 |
| positive regulation of immune response to tumor cell | 1 |
| negative regulation of protein phosphorylation | 1 |
| protein kinase activity | 1 |
| negative regulation of kinase activity | 1 |
| regulation of protein kinase activity | 1 |
| establishment of protein localization | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| macromolecule localization | 1 |
| signal transduction | 1 |
| regulation of cell communication | 1 |
| regulation of signaling | 1 |
| regulation of response to stimulus | 1 |
| regulation of cell-cell adhesion | 1 |
| positive regulation of cell adhesion | 1 |
| cell-cell adhesion | 1 |
| response to insulin | 1 |
| cellular response to peptide hormone stimulus | 1 |
| intracellular protein localization | 1 |
| regulation of localization | 1 |
| neuron differentiation | 1 |
| regulation of cell differentiation | 1 |
| modulation of chemical synaptic transmission | 1 |
| regulation of biological quality | 1 |
| T cell activation | 1 |
| regulation of T cell activation | 1 |
| positive regulation of lymphocyte activation | 1 |
| positive regulation of leukocyte cell-cell adhesion | 1 |
Protein interactions and networks
STRING
0 interactions, top by confidence (×1000):
IntAct
1300 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| YWHAG | HDAC4 | psi-mi:“MI:0915”(physical association) | 0.950 |
| HDAC4 | YWHAG | psi-mi:“MI:0915”(physical association) | 0.950 |
| FAM53C | YWHAG | psi-mi:“MI:0915”(physical association) | 0.880 |
| YWHAG | FAM53C | psi-mi:“MI:0915”(physical association) | 0.880 |
| YWHAH | FAM83G | psi-mi:“MI:0914”(association) | 0.710 |
| RAF1 | CALU | psi-mi:“MI:0914”(association) | 0.640 |
| TERF1 | YWHAG | psi-mi:“MI:0915”(physical association) | 0.550 |
| YWHAG | TINF2 | psi-mi:“MI:0915”(physical association) | 0.510 |
| ABL1 | RPLP1 | psi-mi:“MI:0914”(association) | 0.350 |
| ARAF | PPP6C | psi-mi:“MI:0914”(association) | 0.350 |
| ARAF | CALU | psi-mi:“MI:0914”(association) | 0.350 |
| TNK1 | DDX5 | psi-mi:“MI:0914”(association) | 0.350 |
| sspH2 | AIP | psi-mi:“MI:0914”(association) | 0.350 |
| Cenpe | BBX | psi-mi:“MI:0914”(association) | 0.350 |
| RACGAP1 | STX18 | psi-mi:“MI:0914”(association) | 0.350 |
| YWHAZ | WDR62 | psi-mi:“MI:0914”(association) | 0.350 |
| RBM7 | ZC3H18 | psi-mi:“MI:0914”(association) | 0.350 |
| MAP3K2 | MAP3K3 | psi-mi:“MI:0914”(association) | 0.350 |
| KIF23 | MAP3K4 | psi-mi:“MI:0914”(association) | 0.350 |
| CDC25B | CENPB | psi-mi:“MI:0914”(association) | 0.350 |
| WDR62 | MAPKBP1 | psi-mi:“MI:0914”(association) | 0.350 |
| KDR | AAR2 | psi-mi:“MI:0914”(association) | 0.350 |
| Yap1 | GEMIN2 | psi-mi:“MI:0914”(association) | 0.350 |
| EPB41L3 | YWHAG | psi-mi:“MI:0915”(physical association) | 0.000 |
| YWHAG | ANKS1A | psi-mi:“MI:0915”(physical association) | 0.000 |
| YWHAG | PNN | psi-mi:“MI:0915”(physical association) | 0.000 |
| YWHAG | SH3BP4 | psi-mi:“MI:0915”(physical association) | 0.000 |
| YWHAG | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (2343): YWHAG (Affinity Capture-MS), YWHAG (Affinity Capture-Western), YWHAG (Affinity Capture-Western), DTL (Affinity Capture-Western), YWHAG (Affinity Capture-MS), HDAC4 (Two-hybrid), FAM53C (Two-hybrid), YWHAG (Affinity Capture-MS), YWHAG (Affinity Capture-MS), AKAP13 (Far Western), YWHAG (Reconstituted Complex), YWHAG (Affinity Capture-Western), YWHAG (Affinity Capture-MS), YWHAG (Affinity Capture-MS), YWHAG (Affinity Capture-MS)
ESM2 similar proteins: A4K2U9, P27348, P29309, P29310, P29361, P31946, P35213, P61981, P61982, P61983, P63101, P63102, P63103, P63104, P68250, P68252, P68254, P68255, P68509, P68510, P68511, Q04917, Q1HR36, Q20655, Q2F637, Q3SZI4, Q4R572, Q52M98, Q5F3W6, Q5PRD0, Q5R651, Q5RC20, Q5RFJ2, Q5XGC8, Q5XHK2, Q5ZKC9, Q5ZLQ6, Q5ZMD1, Q6NRY9, Q6P4Z5
Diamond homologs: A4K2U9, B8NLM9, O49995, O49998, O65352, O70456, O77642, P27348, P29309, P29310, P29311, P29361, P31946, P31947, P34730, P35213, P41932, P42643, P42644, P42652, P42653, P42654, P42656, P48348, P49106, P52908, P54632, P61981, P61982, P61983, P62258, P62259, P62260, P62261, P62262, P63101, P63102, P63103, P63104, P68250
SIGNOR signaling
5 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| LATS2 | up-regulates | YWHAG | phosphorylation |
| YWHAG | “down-regulates activity” | NEFL | binding |
| YWHAG | “up-regulates quantity by stabilization” | GEM | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 184 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Transport of Mature Transcript to Cytoplasm | 9 | 25.4× | 5e-09 |
| mRNA Splicing | 19 | 15.4× | 2e-15 |
| RNA Polymerase II Transcription Termination | 9 | 14.6× | 6e-07 |
| mRNA 3’-end processing | 9 | 13.1× | 1e-06 |
| Processing of Capped Intron-Containing Pre-mRNA | 20 | 12.2× | 3e-14 |
| RHO GTPases Activate WASPs and WAVEs | 5 | 11.8× | 2e-03 |
| mRNA Splicing - Major Pathway | 29 | 11.7× | 2e-20 |
| mRNA Splicing - Minor Pathway | 7 | 11.6× | 8e-05 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| negative regulation of mRNA splicing, via spliceosome | 7 | 31.2× | 4e-07 |
| mRNA splice site recognition | 6 | 28.0× | 8e-06 |
| regulation of mRNA splicing, via spliceosome | 5 | 25.8× | 1e-04 |
| RNA splicing, via transesterification reactions | 7 | 25.4× | 1e-06 |
| alternative mRNA splicing, via spliceosome | 6 | 23.5× | 2e-05 |
| regulation of alternative mRNA splicing, via spliceosome | 14 | 19.9× | 3e-12 |
| spliceosomal complex assembly | 5 | 17.5× | 8e-04 |
| morphogenesis of an epithelium | 6 | 12.0× | 9e-04 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
238 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 21 |
| Likely pathogenic | 8 |
| Uncertain significance | 88 |
| Likely benign | 98 |
| Benign | 7 |
Top pathogenic / likely-pathogenic (29)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1180447 | NM_012479.4(YWHAG):c.89dup (p.Thr31fs) | Pathogenic |
| 1335673 | NM_012479.4(YWHAG):c.398A>G (p.Tyr133Cys) | Pathogenic |
| 1386883 | NM_012479.4(YWHAG):c.60_61delinsGA (p.Tyr20_Asp21delinsTer) | Pathogenic |
| 1416114 | NM_012479.4(YWHAG):c.89del (p.Val30fs) | Pathogenic |
| 2013349 | NM_012479.4(YWHAG):c.518T>G (p.Leu173Ter) | Pathogenic |
| 2034563 | NM_012479.4(YWHAG):c.576dup (p.Ala193fs) | Pathogenic |
| 2088488 | NM_012479.4(YWHAG):c.462C>G (p.Tyr154Ter) | Pathogenic |
| 2425823 | NC_000007.13:g.(?75988019)(75988125_?)del | Pathogenic |
| 2713430 | NM_012479.4(YWHAG):c.648_671del (p.Tyr216_Gln224delinsTer) | Pathogenic |
| 2747265 | NM_012479.4(YWHAG):c.619G>A (p.Glu207Lys) | Pathogenic |
| 2816056 | NM_012479.4(YWHAG):c.529C>T (p.Leu177Phe) | Pathogenic |
| 2827317 | NM_012479.4(YWHAG):c.542T>C (p.Val181Ala) | Pathogenic |
| 2845799 | NM_012479.4(YWHAG):c.631del (p.Leu211fs) | Pathogenic |
| 2867278 | NM_012479.4(YWHAG):c.121del (p.Glu41fs) | Pathogenic |
| 3651330 | NM_012479.4(YWHAG):c.448del (p.Ser150fs) | Pathogenic |
| 3657604 | NM_012479.4(YWHAG):c.125G>A (p.Arg42Gln) | Pathogenic |
| 3676386 | NM_012479.4(YWHAG):c.202C>T (p.Gln68Ter) | Pathogenic |
| 3725513 | NM_012479.4(YWHAG):c.537C>G (p.Tyr179Ter) | Pathogenic |
| 4084968 | NM_012479.4(YWHAG):c.169C>G (p.Arg57Gly) | Pathogenic |
| 659092 | NM_012479.4(YWHAG):c.169C>T (p.Arg57Cys) | Pathogenic |
| 802325 | NM_012479.4(YWHAG):c.451G>T (p.Glu151Ter) | Pathogenic |
| 1027791 | NM_012479.4(YWHAG):c.683A>T (p.Asp228Val) | Likely pathogenic |
| 1312189 | NM_012479.4(YWHAG):c.682G>A (p.Asp228Asn) | Likely pathogenic |
| 2056700 | NM_012479.4(YWHAG):c.180G>A (p.Trp60Ter) | Likely pathogenic |
| 2584359 | NM_012479.4(YWHAG):c.628_642del (p.Thr210_Asp214del) | Likely pathogenic |
| 2831365 | NM_012479.4(YWHAG):c.-144_72del (p.Met1_Ala24del) | Likely pathogenic |
| 3339914 | NC_000007.13:g.(?75956115)(75988309_?)del | Likely pathogenic |
| 3359022 | NM_012479.4(YWHAG):c.532A>G (p.Asn178Asp) | Likely pathogenic |
| 4073675 | NM_012479.4(YWHAG):c.652_653insT (p.Asp218fs) | Likely pathogenic |
SpliceAI
454 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 7:76330233:CCT:C | acceptor_loss | 1.0000 |
| 7:76330234:C:G | acceptor_loss | 1.0000 |
| 7:76330235:T:A | acceptor_loss | 1.0000 |
| 7:76358718:TCA:T | donor_loss | 1.0000 |
| 7:76358719:CACG:C | donor_loss | 1.0000 |
| 7:76358720:A:AC | donor_gain | 1.0000 |
| 7:76358720:ACG:A | donor_loss | 1.0000 |
| 7:76358720:ACGTT:A | donor_gain | 1.0000 |
| 7:76358721:C:CT | donor_gain | 1.0000 |
| 7:76358721:CG:C | donor_gain | 1.0000 |
| 7:76358721:CGT:C | donor_gain | 1.0000 |
| 7:76358721:CGTT:C | donor_gain | 1.0000 |
| 7:76358721:CGTTC:C | donor_gain | 1.0000 |
| 7:76330230:TCAC:T | acceptor_gain | 0.9900 |
| 7:76330231:CAC:C | acceptor_gain | 0.9900 |
| 7:76330231:CACC:C | acceptor_gain | 0.9900 |
| 7:76330232:AC:A | acceptor_gain | 0.9900 |
| 7:76330233:CC:C | acceptor_gain | 0.9900 |
| 7:76330234:C:CC | acceptor_gain | 0.9900 |
| 7:76330238:C:CT | acceptor_gain | 0.9900 |
| 7:76330239:A:T | acceptor_gain | 0.9900 |
| 7:76358724:T:A | donor_gain | 0.9900 |
| 7:76330230:TCACC:T | acceptor_gain | 0.9800 |
| 7:76330232:ACCTG:A | acceptor_gain | 0.9800 |
| 7:76330233:CCTGC:C | acceptor_gain | 0.9800 |
| 7:76330234:CTGCC:C | acceptor_gain | 0.9800 |
| 7:76330238:C:T | acceptor_gain | 0.9800 |
| 7:76347453:G:C | donor_gain | 0.9800 |
| 7:76358716:ACTC:A | donor_loss | 0.9800 |
| 7:76330231:CACCT:C | acceptor_gain | 0.9700 |
AlphaMissense
1639 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 7:76329622:C:A | W233C | 1.000 |
| 7:76329622:C:G | W233C | 1.000 |
| 7:76329623:C:G | W233S | 1.000 |
| 7:76329624:A:G | W233R | 1.000 |
| 7:76329624:A:T | W233R | 1.000 |
| 7:76329626:A:G | L232P | 1.000 |
| 7:76329626:A:T | L232H | 1.000 |
| 7:76329632:A:G | L230P | 1.000 |
| 7:76329632:A:T | L230H | 1.000 |
| 7:76329633:G:A | L230F | 1.000 |
| 7:76329634:G:C | N229K | 1.000 |
| 7:76329634:G:T | N229K | 1.000 |
| 7:76329635:T:A | N229I | 1.000 |
| 7:76329636:T:A | N229Y | 1.000 |
| 7:76329636:T:C | N229D | 1.000 |
| 7:76329636:T:G | N229H | 1.000 |
| 7:76329637:G:C | D228E | 1.000 |
| 7:76329637:G:T | D228E | 1.000 |
| 7:76329638:T:A | D228V | 1.000 |
| 7:76329638:T:C | D228G | 1.000 |
| 7:76329638:T:G | D228A | 1.000 |
| 7:76329639:C:A | D228Y | 1.000 |
| 7:76329639:C:G | D228H | 1.000 |
| 7:76329639:C:T | D228N | 1.000 |
| 7:76329641:C:A | R227L | 1.000 |
| 7:76329641:C:G | R227P | 1.000 |
| 7:76329642:G:A | R227C | 1.000 |
| 7:76329642:G:T | R227S | 1.000 |
| 7:76329644:A:C | L226R | 1.000 |
| 7:76329644:A:G | L226P | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000142507 (7:76358427 A>T), RS1000222353 (7:76351200 A>G), RS1000332025 (7:76327336 C>T), RS1000413621 (7:76343407 T>C), RS1000419932 (7:76348951 T>C,G), RS1000503838 (7:76359281 C>G), RS1000514387 (7:76343182 T>C), RS1000534167 (7:76357644 C>G), RS1000568129 (7:76343392 C>A), RS1000784127 (7:76353106 T>C), RS1000824473 (7:76352318 A>C,G), RS1000850099 (7:76337828 G>A), RS1000974756 (7:76331298 G>A), RS1001108356 (7:76358621 AC>A), RS1001128902 (7:76337880 A>T)
Disease associations
OMIM: gene MIM:605356 | disease phenotypes: MIM:617665
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| developmental and epileptic encephalopathy, 56 | Definitive | Autosomal dominant |
| undetermined early-onset epileptic encephalopathy | Strong | Autosomal dominant |
Mondo (6): developmental and epileptic encephalopathy, 56 (MONDO:0033365), specific learning disability (MONDO:0016225), intellectual disability (MONDO:0001071), microcephaly (MONDO:0001149), constipation disorder (MONDO:0002203), undetermined early-onset epileptic encephalopathy (MONDO:0018614)
Orphanet (2): Specific learning disability (Orphanet:211047), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)
HPO phenotypes
63 total (30 of 63 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000252 | Microcephaly |
| HP:0000348 | High forehead |
| HP:0000494 | Downslanted palpebral fissures |
| HP:0000504 | Abnormality of vision |
| HP:0000508 | Ptosis |
| HP:0000546 | Retinal degeneration |
| HP:0000639 | Nystagmus |
| HP:0000648 | Optic atrophy |
| HP:0000668 | Hypodontia |
| HP:0000708 | Atypical behavior |
| HP:0000717 | Autism |
| HP:0000739 | Anxiety |
| HP:0000750 | Delayed speech and language development |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001251 | Ataxia |
| HP:0001252 | Hypotonia |
| HP:0001257 | Spasticity |
| HP:0001263 | Global developmental delay |
| HP:0001265 | Hyporeflexia |
| HP:0001268 | Mental deterioration |
| HP:0001273 | Abnormal corpus callosum morphology |
| HP:0001288 | Gait disturbance |
| HP:0001290 | Generalized hypotonia |
| HP:0001298 | Encephalopathy |
| HP:0001315 | Reduced tendon reflexes |
| HP:0001336 | Myoclonus |
| HP:0001337 | Tremor |
| HP:0001382 | Joint hypermobility |
GWAS associations
3 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001096_1 | Multiple sclerosis | 8.000000e-06 |
| GCST001096_2 | Multiple sclerosis | 6.000000e-06 |
| GCST007201_10 | Schizophrenia | 5.000000e-07 |
MeSH disease descriptors (4)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D003248 | Constipation | C23.888.821.150 |
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D008831 | Microcephaly | C05.660.207.620; C10.500.507.400.500; C16.131.621.207.620; C16.131.666.507.400.500 |
| D000067559 | Specific Learning Disorder | C10.597.606.150.550.700; C23.888.592.604.150.550.700; F03.625.374.188.700; F03.625.562.700 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1293296 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 1,538 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1232461 | MOLIBRESIB | 2 | 1,538 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
Binding affinities (BindingDB)
14 measured of 52 human assays (52 total across all organisms); most potent 14 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| 1-ethyl-2-([1,2,4]triazolo[4,3-a]pyridin-3-ylsulfanylmethyl)benzimidazole-5-carboxylic acid | IC50 | 853 nM |
| 6-methyl-2-phenyl-1,2-dihydropyridine-3,3,4,4-tetracarbonitrile | IC50 | 3150 nM |
| 2-(2-hydroxy-9-keto-5H-benzo[b][1,4]benzoxazepin-6-yl)benzoic acid | IC50 | 5020 nM |
| 1-(ethylamino)-3-methyl-3H-naphtho[1,2,3-de]quinoline-2,7-dione | IC50 | 7290 nM |
| 1-ethyl-4-keto-6-piperidinosulfonyl-N-(2-pyridylmethyl)quinoline-3-carboxamide | IC50 | 8920 nM |
| (4Z)-4-[[4-(dimethylamino)anilino]methylene]-2-phenyl-2-oxazolin-5-one | IC50 | 9680 nM |
| 2-[[2-(4-methoxyphenyl)-5-methyl-1,3-oxazol-4-yl]methylsulfinyl]-N-(pyridin-2-ylmethyl)acetamide | IC50 | 10700 nM |
| 5-Amino-2-pyrrolidin-1-yl-benzamide | IC50 | 18100 nM |
| 2-(N-[2-(1-benzotriazolyl)-1-oxoethyl]-4-methoxyanilino)-N-(2-methoxyethyl)-2-pyridin-4-ylacetamide | IC50 | 24600 nM |
| MLS000119773 | IC50 | 25600 nM |
| 2,4-dimethyl-2,3-dihydrothieno[3,2-c]quinoline-8-carboxylic acid | IC50 | 25700 nM |
| (4-methoxy-7,7-dimethyl-6,8-dihydropyrimido[4,5-b][1,4]benzothiazin-9-yl)amine;hydrobromide | IC50 | 30000 nM |
| 6-chloranyl-4-methyl-8-[(4-methylpiperidin-1-yl)methyl]-7-oxidanyl-chromen-2-one | IC50 | 45600 nM |
| 5-[(2-methylbenzyl)sulfonylmethyl]-N-(2-pyridylmethyl)-2-furamide | IC50 | 50000 nM |
ChEMBL bioactivities
15 potent at pChembl≥5 of 24 total, top 15 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.36 | Kd | 4.41 | nM | CHEMBL3752910 |
| 8.35 | ED50 | 4.485 | nM | CHEMBL3752910 |
| 6.28 | IC50 | 530 | nM | MOLIBRESIB |
| 6.17 | Kd | 668.8 | nM | CHEMBL5653589 |
| 6.17 | ED50 | 680.2 | nM | CHEMBL5653589 |
| 6.07 | IC50 | 852.7 | nM | CHEMBL1502839 |
| 5.70 | IC50 | 2000 | nM | BLAPSIN A |
| 5.60 | IC50 | 2500 | nM | BLAPSIN B |
| 5.50 | IC50 | 3147 | nM | CHEMBL1598223 |
| 5.30 | IC50 | 5022 | nM | CHEMBL1385512 |
| 5.14 | IC50 | 7294 | nM | CHEMBL2003304 |
| 5.05 | IC50 | 8917 | nM | CHEMBL1544329 |
| 5.04 | IC50 | 9200 | nM | BLAPSIN A |
| 5.01 | IC50 | 9679 | nM | CHEMBL2001481 |
| 5.00 | IC50 | 1e+04 | nM | BLAPSIN B |
PubChem BioAssay actives
7 with measured affinity, of 16 total; 5 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149801: Binding affinity to human YWHAG incubated for 45 mins by Kinobead based pull down assay | kd | 0.0044 | uM |
| 2-[(4S)-6-(4-chlorophenyl)-8-methoxy-1-methyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepin-4-yl]-N-ethylacetamide | 2178979: Inhibition of YWHAG (unknown origin) incubated for 1 hr by colloidal coomassie staining based LC-MS/MS analysis | ic50 | 0.5300 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149801: Binding affinity to human YWHAG incubated for 45 mins by Kinobead based pull down assay | kd | 0.6688 | uM |
| 2-(3,4-dihydroxyphenyl)ethyl 2-(3,4-dihydroxyphenyl)acetate | 662445: Inhibition of recombinant GST-tagged 14-3-3gamma interaction with TMR-pS259-Raf peptide after 30 mins by fluorescence polarization assay | ic50 | 2.0000 | uM |
| 1-(3,4-dihydroxyphenyl)-3,4-dihydro-1H-isochromene-6,7-diol | 662445: Inhibition of recombinant GST-tagged 14-3-3gamma interaction with TMR-pS259-Raf peptide after 30 mins by fluorescence polarization assay | ic50 | 2.5000 | uM |
CTD chemical–gene interactions
51 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | affects cotreatment, increases abundance, increases expression | 3 |
| Smoke | decreases expression, increases abundance | 3 |
| bisphenol A | increases expression, decreases expression | 2 |
| Air Pollutants | increases abundance, decreases expression | 2 |
| Arsenic | affects methylation, affects cotreatment, increases abundance, increases expression | 2 |
| Benzo(a)pyrene | affects methylation, decreases expression, increases methylation | 2 |
| Caffeine | increases expression, increases phosphorylation | 2 |
| Estradiol | affects expression, increases expression | 2 |
| Tobacco Smoke Pollution | affects expression, increases expression | 2 |
| Cadmium Chloride | increases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| FR900359 | increases phosphorylation | 1 |
| bisphenol F | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, affects localization, decreases expression | 1 |
| tetrabromobisphenol A | decreases expression | 1 |
| manganese chloride | increases abundance, increases expression, affects cotreatment | 1 |
| fumagillin | affects cotreatment, decreases activity, decreases metabolic processing | 1 |
| potassium chromate(VI) | affects cotreatment, increases expression | 1 |
| dibenzo(a,l)pyrene | decreases expression | 1 |
| epigallocatechin gallate | affects cotreatment, increases expression | 1 |
| evodiamine | increases expression | 1 |
| microcystin RR | decreases expression | 1 |
| 3,4,5-trihydroxy-2–methoxy-8,8-dimethyl-N-(hexahydro-2-oxo-6-(cyclohexylcarbonyl)oxy-2H-azepin-3-yl)non-6-enamide | affects cotreatment, decreases activity, decreases metabolic processing | 1 |
| bisphenol B | increases expression | 1 |
| bromovanin | increases expression | 1 |
| hexabrominated diphenyl ether 153 | decreases expression | 1 |
| eprenetapopt | increases expression, affects reaction | 1 |
| bisphenol S | increases expression | 1 |
| bisphenol AF | increases expression | 1 |
ChEMBL screening assays
12 unique, capped per target: 11 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1614427 | Functional | PUBCHEM_BIOASSAY: 14-3-3 protein interaction modulators Dose Response Confirmation. (Class of assay: confirmatory) [Related pubchem assays: 422 (Primary screen preceding this dose response confirmation assay.)] | PubChem BioAssay data set |
| CHEMBL2033506 | Binding | Inhibition of recombinant GST-tagged 14-3-3gamma interaction with PRAS40 in Cos7 cell lysate by ELISA | Identification of blapsins A and B as potent small-molecule 14-3-3 inhibitors from the insect Blaps japanensis. — Bioorg Med Chem Lett |
Cellosaurus cell lines
1 cell lines: 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B3LJ | Abcam HEK293T YWHAG KO | Transformed cell line | Female |
Clinical trials (associated diseases)
295 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT05657860 | PHASE4 | COMPLETED | Guanfacine Extended Release for the Reduction of Aggression and Self-injurious Behavior Associated With Prader-Willi Syndrome |
| NCT05744479 | PHASE4 | RECRUITING | Metformin for Antipsychotic-induced Weight Gain in Adults With Intellectual Disability |
| NCT06107829 | PHASE4 | WITHDRAWN | Valbenazine Treatment of Tardive Dyskinesia in Adults With Intellectual/Developmental Disabilities |
| NCT06997198 | PHASE4 | NOT_YET_RECRUITING | Deutetrabenazine Treatment for Tardive Dyskinesia in Intellectual/Developmental Disabilities |
| NCT00149877 | PHASE4 | COMPLETED | Efficacy, Safety and Tolerability of Tegaserod in Patients With Chronic Constipation |
| NCT00153114 | PHASE4 | COMPLETED | PolyethyleneGlycol3350 Laxative vs Placebo in Constipated Children |
| NCT00153127 | PHASE4 | COMPLETED | Comparison of PolyethyleneGlycol and Placebo for Relief of Constipation From Constipating Medications |
| NCT00153140 | PHASE4 | COMPLETED | Polyethyleneglycol3350 vs Tegaserod in Treatment of Patients With Chronic Constipation |
| NCT00153153 | PHASE4 | COMPLETED | Extended Use of Polyethyleneglycol3350 Laxative in Constipated Patients |
| NCT00157638 | PHASE4 | COMPLETED | Integrating Family Medicine and Pharmacy to Advance Primary Care Therapeutics |
| NCT00164125 | PHASE4 | COMPLETED | An Open Label Study of Chronic Polyethyleneglycol3350 Use in Constipated Patients |
| NCT00171522 | PHASE4 | COMPLETED | Preference of Tegaserod vs. PEG 3350 in Patients With Constipation |
| NCT00256984 | PHASE4 | COMPLETED | Study of Stapled Transanal Rectal Resection (STARR) Surgery in Refractory Constipation Associated With Obstructive Defecation Syndrome (ODS) |
| NCT00276354 | PHASE4 | COMPLETED | Study of Long-term Use of Forlax® in Elderly Patients With Chronic Constipation |
| NCT00286520 | PHASE4 | COMPLETED | Treatment of Fecal Incontinence and Constipation in Patients With Spinal Cord Injury |
| NCT00319670 | PHASE4 | COMPLETED | A Pilot Study of a New MiraLax® Dose Formulation For Use in Constipated Children |
| NCT00348634 | PHASE4 | TERMINATED | Effect of Tegaserod on Orocecal Transit in Elderly Chronic Constipation Patients |
| NCT00452335 | PHASE4 | COMPLETED | Safety and Efficacy of Lubiprostone in Pediatric Patients With Constipation |
| NCT00521872 | PHASE4 | COMPLETED | Stapled Trans Anal Rectal Resection (STARR) for Outlet Obstruction: Functional and Morphological Outcome |
| NCT00583609 | PHASE4 | COMPLETED | A Pilot Study of a New PEG3350 Dose Formulation For Use in Constipated Children |
| NCT00603681 | PHASE4 | COMPLETED | Comparison of PEG Solutions With and Without Electrolytes in the Treatment of Constipation |
| NCT00712543 | PHASE4 | COMPLETED | A Preference Study Comparing Kristalose® and Liquid Lactulose |
| NCT00763399 | PHASE4 | COMPLETED | Effect of Probiotics on Intestinal Bacterial Population and Immune Modulation |
| NCT00770432 | PHASE4 | COMPLETED | Study Comparing PEG 3350 Laxative to Placebo in the Treatment of Occasional Constipation (Study CL2007-12)(P08216) |
| NCT00799201 | PHASE4 | TERMINATED | Enteral Naloxone Versus a Traditional Bowel Regimen for the Prevention of Opioid Induced Constipation in Trauma Patients |
| NCT00844831 | PHASE4 | COMPLETED | Effects of Lubiprostone on Small Bowel and Colonic Bacteria: A Correlation Study With Segmental and Whole Gut Transit |
| NCT00949377 | PHASE4 | WITHDRAWN | Can Methylnaltrexone Safely Treat Opioid Related Constipation in the Emergency Department? |
| NCT01003249 | PHASE4 | TERMINATED | Dysfunctional Voiding and Lower Urinary Tract Symptoms With Baclofen |
| NCT01096290 | PHASE4 | TERMINATED | Comparison of Lubiprostone and Placebo for the Relief of Constipation From Constipating Medications |
| NCT01114997 | PHASE4 | TERMINATED | Effect of Lidocaine and Esmolol to Improve the Quality of Recovery |
| NCT01170039 | PHASE4 | COMPLETED | The Effectiveness of Lubiprostone in Constipated Diabetics |
| NCT01180725 | PHASE4 | COMPLETED | Investigation of Dried Plums in the Treatment of Adults With Constipation |
| NCT01189409 | PHASE4 | TERMINATED | Polyethylene Glycol (PEG) Versus Sennosides Study in Opioid-Induced Constipation in Cancer Patients |
| NCT01230840 | PHASE4 | COMPLETED | Effect of Wheat Dextrin on Calcium and Magnesium Absorption |
| NCT01236534 | PHASE4 | COMPLETED | Lubiprostone in Patients With Multiple Sclerosis Associated Constipation |
| NCT01267370 | PHASE4 | COMPLETED | Soy Polysaccharide Fiber for the Treatment of Chronic Constipation in Children: a Randomized, Double-blind Trial |
| NCT01333787 | PHASE4 | COMPLETED | Dietary Fiber Mixture in Constipated Pediatric Patients |
| NCT01424228 | PHASE4 | COMPLETED | Evaluation of Long-term Prucalopride Treatment With Chronic Constipation in Subjects Aged ≥ 18 Years |
| NCT01592734 | PHASE4 | COMPLETED | Efficacy and Tolerability of PEG-only Laxative for Fecal Impaction and Chronic Constipation in Children |
| NCT01707667 | PHASE4 | COMPLETED | Study to Investigate Prucalopride vs. Polyethylene Glycol 3350 on Colon Activity |
Related Atlas pages
- Associated diseases: developmental and epileptic encephalopathy, 56, undetermined early-onset epileptic encephalopathy
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): constipation disorder, developmental and epileptic encephalopathy, 56, microcephaly, multiple sclerosis, specific learning disability, undetermined early-onset epileptic encephalopathy