ZBTB20-AS3

Summary

ZBTB20-AS3 (ZBTB20 antisense RNA 3, HGNC:42422) is a long non-coding RNA gene on chromosome 3q13.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:42422
Approved symbol	ZBTB20-AS3
Name	ZBTB20 antisense RNA 3
Location	3q13.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000239946
Ensembl biotype	lncRNA
Entrez	104413890
RNAcentral	URS00007E3562 — lncRNA, 545 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000498630

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000498630 — 3 exons

Exon	Start	End
ENSE00001813418	114876345	114876514
ENSE00001936424	114873912	114874122
ENSE00001947398	114873114	114873196

Expression profiles

Bgee: expression breadth ubiquitous, 112 present calls, max score 85.10.

Top tissues by expression

112 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.10	gold quality
corpus callosum	UBERON:0002336	74.71	gold quality
calcaneal tendon	UBERON:0003701	73.46	gold quality
sural nerve	UBERON:0015488	71.14	gold quality
adrenal tissue	UBERON:0018303	70.85	gold quality
bone marrow cell	CL:0002092	70.83	gold quality
skeletal muscle tissue	UBERON:0001134	66.63	silver quality
tonsil	UBERON:0002372	66.35	gold quality
liver	UBERON:0002107	65.80	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.23	gold quality
gall bladder	UBERON:0002110	61.80	gold quality
blood	UBERON:0000178	61.53	gold quality
bone marrow	UBERON:0002371	59.98	gold quality
kidney	UBERON:0002113	56.50	gold quality
prefrontal cortex	UBERON:0000451	56.47	gold quality
islet of Langerhans	UBERON:0000006	55.46	gold quality
monocyte	CL:0000576	55.14	gold quality
vermiform appendix	UBERON:0001154	55.06	gold quality
adult mammalian kidney	UBERON:0000082	54.31	gold quality
muscle of leg	UBERON:0001383	54.16	gold quality
superior frontal gyrus	UBERON:0002661	54.07	gold quality
urinary bladder	UBERON:0001255	53.76	gold quality
primary visual cortex	UBERON:0002436	53.43	gold quality
stomach	UBERON:0000945	51.76	gold quality
endometrium	UBERON:0001295	51.43	gold quality
gastrocnemius	UBERON:0001388	50.94	gold quality
lung	UBERON:0002048	50.57	gold quality
right lobe of liver	UBERON:0001114	50.31	silver quality
placenta	UBERON:0001987	50.07	silver quality
substantia nigra	UBERON:0002038	50.02	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.73

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.