ZFAND3-DT

Summary

ZFAND3-DT (ZFAND3 divergent transcript, HGNC:55841) is a long non-coding RNA gene on chromosome 6p21.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55841
Approved symbol	ZFAND3-DT
Name	ZFAND3 divergent transcript
Location	6p21.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225945
Ensembl biotype	lncRNA
Entrez	107986593
RNAcentral	URS0002A5B4C2 — lncRNA, 1505 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000415890, ENST00000810332, ENST00000810333, ENST00000810334, ENST00000810335, ENST00000810336, ENST00000810337, ENST00000810338, ENST00000810339

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000415890 — 3 exons

Exon	Start	End
ENSE00001672761	37815777	37815881
ENSE00001694567	37819146	37819218
ENSE00001696782	37818578	37818818

Expression profiles

Bgee: expression breadth ubiquitous, 124 present calls, max score 92.77.

Top tissues by expression

124 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.77	gold quality
right testis	UBERON:0004534	76.15	gold quality
left testis	UBERON:0004533	76.02	gold quality
testis	UBERON:0000473	75.56	gold quality
bone marrow cell	CL:0002092	74.58	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	72.65	gold quality
ganglionic eminence	UBERON:0004023	71.21	gold quality
ventricular zone	UBERON:0003053	67.99	gold quality
tonsil	UBERON:0002372	67.50	gold quality
granulocyte	CL:0000094	66.31	gold quality
lymph node	UBERON:0000029	65.84	gold quality
vermiform appendix	UBERON:0001154	65.56	gold quality
bone marrow	UBERON:0002371	64.51	gold quality
right uterine tube	UBERON:0001302	64.38	gold quality
placenta	UBERON:0001987	61.83	gold quality
islet of Langerhans	UBERON:0000006	61.69	gold quality
gall bladder	UBERON:0002110	61.34	gold quality
monocyte	CL:0000576	60.60	gold quality
smooth muscle tissue	UBERON:0001135	60.42	gold quality
duodenum	UBERON:0002114	60.15	gold quality
fallopian tube	UBERON:0003889	60.13	gold quality
skeletal muscle tissue	UBERON:0001134	59.97	silver quality
metanephros cortex	UBERON:0010533	58.52	gold quality
prefrontal cortex	UBERON:0000451	58.28	gold quality
stromal cell of endometrium	CL:0002255	58.22	gold quality
cortex of kidney	UBERON:0001225	57.77	gold quality
adult mammalian kidney	UBERON:0000082	57.67	gold quality
endometrium	UBERON:0001295	57.59	gold quality
kidney	UBERON:0002113	57.31	gold quality
primary visual cortex	UBERON:0002436	56.87	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.98

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.