ZFP3-DT

Summary

ZFP3-DT (ZFP3 divergent transcript, HGNC:55340) is a long non-coding RNA gene on chromosome 17p13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55340
Approved symbol	ZFP3-DT
Name	ZFP3 divergent transcript
Location	17p13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000262693
Ensembl biotype	lncRNA
Entrez	119139902
RNAcentral	URS000026E61C — lncRNA, 490 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000574352

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000574352 — 2 exons

Exon	Start	End
ENSE00002654641	5077887	5078113
ENSE00002676812	5075678	5075940

Expression profiles

Bgee: expression breadth ubiquitous, 120 present calls, max score 79.74.

Top tissues by expression

120 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.74	silver quality
sural nerve	UBERON:0015488	75.69	gold quality
hindlimb stylopod muscle	UBERON:0004252	66.01	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	62.55	gold quality
skeletal muscle tissue	UBERON:0001134	59.79	gold quality
islet of Langerhans	UBERON:0000006	57.88	gold quality
gall bladder	UBERON:0002110	56.71	gold quality
muscle of leg	UBERON:0001383	56.35	gold quality
prefrontal cortex	UBERON:0000451	56.22	gold quality
gastrocnemius	UBERON:0001388	56.10	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	56.03	gold quality
monocyte	CL:0000576	55.44	gold quality
stromal cell of endometrium	CL:0002255	55.18	gold quality
right testis	UBERON:0004534	54.94	gold quality
bone marrow	UBERON:0002371	54.41	gold quality
lymph node	UBERON:0000029	54.18	gold quality
lower esophagus mucosa	UBERON:0035834	53.63	gold quality
vermiform appendix	UBERON:0001154	53.53	gold quality
left testis	UBERON:0004533	53.49	gold quality
tonsil	UBERON:0002372	53.27	gold quality
testis	UBERON:0000473	53.21	gold quality
urinary bladder	UBERON:0001255	52.70	gold quality
pancreas	UBERON:0001264	52.28	gold quality
superior frontal gyrus	UBERON:0002661	52.22	gold quality
blood	UBERON:0000178	52.02	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	51.04	gold quality
placenta	UBERON:0001987	50.99	gold quality
frontal cortex	UBERON:0001870	50.35	gold quality
primary visual cortex	UBERON:0002436	50.29	gold quality
cortex of kidney	UBERON:0001225	48.73	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.14

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.