ZNF213-AS1

Summary

ZNF213-AS1 (ZNF213 antisense RNA 1, HGNC:50505) is a long non-coding RNA gene on chromosome 16p13.3.

Predicted to be involved in SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition. Predicted to be part of signal recognition particle, endoplasmic reticulum targeting.

Source: NCBI Gene 100507458 — RefSeq curated summary.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50505
Approved symbol	ZNF213-AS1
Name	ZNF213 antisense RNA 1
Location	16p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000263072
Ensembl biotype	lncRNA
Entrez	100507458
RNAcentral	URS000075E750 — lncRNA, 1131 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 90 — 90 lncRNA

ENST00000570901, ENST00000571449, ENST00000571963, ENST00000572691, ENST00000573414, ENST00000573447, ENST00000575089, ENST00000575139, ENST00000576490, ENST00000576590, ENST00000576943, ENST00000577163, ENST00000652946, ENST00000653148, ENST00000653667, ENST00000654387, ENST00000654482, ENST00000657201, ENST00000657996, ENST00000658602, ENST00000659227, ENST00000664624, ENST00000668778, ENST00000668823, ENST00000670666, ENST00000671396, ENST00000673666, ENST00000674022, ENST00000685085, ENST00000686529, ENST00000686892, ENST00000691772, ENST00000692817, ENST00000701326, ENST00000701463, ENST00000701705, ENST00000701888, ENST00000702359, ENST00000702474, ENST00000807029, ENST00000807030, ENST00000807031, ENST00000849956, ENST00000849957, ENST00000849958, ENST00000849959, ENST00000849960, ENST00000849961, ENST00000849962, ENST00000849963, ENST00000849964, ENST00000849965, ENST00000849966, ENST00000849967, ENST00000849968, ENST00000849969, ENST00000849970, ENST00000849971, ENST00000849972, ENST00000849973, ENST00000849974, ENST00000849975, ENST00000849976, ENST00000849977, ENST00000849978, ENST00000849979, ENST00000849980, ENST00000849981, ENST00000849982, ENST00000849983, ENST00000849984, ENST00000849985, ENST00000849986, ENST00000849987, ENST00000849988, ENST00000849989, ENST00000849990, ENST00000849991, ENST00000849992, ENST00000849993, ENST00000849994, ENST00000849995, ENST00000849996, ENST00000849997, ENST00000849998, ENST00000849999, ENST00000850000, ENST00000850001, ENST00000850002, ENST00000850003

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000570901 — 2 exons

Exon	Start	End
ENSE00003984548	3125258	3125966
ENSE00004280993	3129248	3130160

Expression profiles

Bgee: expression breadth ubiquitous, 169 present calls, max score 91.01.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 7.6863 / max 108.5483, expressed in 1717 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
156011	7.0924	1704
156010	0.5036	217
156012	0.0903	22

Top tissues by expression

276 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right uterine tube	UBERON:0001302	91.01	gold quality
adenohypophysis	UBERON:0002196	90.15	gold quality
right hemisphere of cerebellum	UBERON:0014890	89.18	gold quality
cerebellar hemisphere	UBERON:0002245	89.01	gold quality
cerebellar cortex	UBERON:0002129	88.87	gold quality
right lobe of thyroid gland	UBERON:0001119	88.56	gold quality
pituitary gland	UBERON:0000007	88.45	gold quality
left lobe of thyroid gland	UBERON:0001120	87.88	gold quality
left ovary	UBERON:0002119	87.15	gold quality
thyroid gland	UBERON:0002046	86.57	gold quality
right ovary	UBERON:0002118	86.22	gold quality
metanephros cortex	UBERON:0010533	85.39	gold quality
muscle of leg	UBERON:0001383	85.13	gold quality
hindlimb stylopod muscle	UBERON:0004252	84.89	gold quality
apex of heart	UBERON:0002098	84.84	gold quality
cerebellum	UBERON:0002037	84.75	gold quality
endocervix	UBERON:0000458	84.61	gold quality
gastrocnemius	UBERON:0001388	84.54	gold quality
body of uterus	UBERON:0009853	84.39	gold quality
left adrenal gland cortex	UBERON:0035825	84.10	gold quality
right frontal lobe	UBERON:0002810	83.97	gold quality
mucosa of transverse colon	UBERON:0004991	83.90	gold quality
right adrenal gland	UBERON:0001233	83.81	gold quality
left adrenal gland	UBERON:0001234	83.79	gold quality
minor salivary gland	UBERON:0001830	83.60	gold quality
left uterine tube	UBERON:0001303	83.56	gold quality
small intestine Peyer’s patch	UBERON:0003454	83.33	gold quality
ectocervix	UBERON:0012249	83.09	gold quality
right adrenal gland cortex	UBERON:0035827	83.05	gold quality
anterior cingulate cortex	UBERON:0009835	82.68	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.22

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.