ZNF232-AS1

Summary

ZNF232-AS1 (ZNF232 antisense RNA 1, HGNC:40623) is a long non-coding RNA gene on chromosome 17p13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40623
Approved symbol	ZNF232-AS1
Name	ZNF232 antisense RNA 1
Location	17p13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000234327
Ensembl biotype	lncRNA
Entrez	101928000
RNAcentral	URS0000A7709E — lncRNA, 492 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 19 — 18 lncRNA, 1 TEC

ENST00000413077, ENST00000570712, ENST00000571138, ENST00000623522, ENST00000665679, ENST00000843117, ENST00000843118, ENST00000843119, ENST00000843120, ENST00000843121, ENST00000843122, ENST00000843123, ENST00000843124, ENST00000843125, ENST00000843126, ENST00000843127, ENST00000843128, ENST00000843129, ENST00000843130

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000413077 — 5 exons

Exon	Start	End
ENSE00001649890	5113386	5113452
ENSE00004268891	5111339	5112118
ENSE00004268898	5114158	5114402
ENSE00004268909	5097468	5097631
ENSE00004268910	5097099	5097192

Expression profiles

Bgee: expression breadth ubiquitous, 188 present calls, max score 90.26.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 10.8783 / max 107.9026, expressed in 1747 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
159015	9.6953	1728
159016	1.1830	759

Top tissues by expression

223 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
putamen	UBERON:0001874	90.26	gold quality
nucleus accumbens	UBERON:0001882	90.01	gold quality
caudate nucleus	UBERON:0001873	88.37	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	88.04	gold quality
amygdala	UBERON:0001876	87.55	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.44	gold quality
spinal cord	UBERON:0002240	86.88	gold quality
anterior cingulate cortex	UBERON:0009835	86.55	gold quality
cortical plate	UBERON:0005343	86.44	gold quality
right testis	UBERON:0004534	86.41	gold quality
Brodmann (1909) area 9	UBERON:0013540	85.96	gold quality
left testis	UBERON:0004533	85.69	gold quality
hypothalamus	UBERON:0001898	85.63	gold quality
right frontal lobe	UBERON:0002810	85.04	gold quality
prefrontal cortex	UBERON:0000451	85.03	gold quality
substantia nigra	UBERON:0002038	84.90	gold quality
Ammon’s horn	UBERON:0001954	84.45	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	84.18	gold quality
testis	UBERON:0000473	83.97	gold quality
forebrain	UBERON:0001890	83.91	gold quality
midbrain	UBERON:0001891	83.78	gold quality
brain	UBERON:0000955	83.31	gold quality
neocortex	UBERON:0001950	83.28	gold quality
frontal cortex	UBERON:0001870	82.90	gold quality
cerebral cortex	UBERON:0000956	82.79	gold quality
gastrocnemius	UBERON:0001388	82.69	gold quality
hindlimb stylopod muscle	UBERON:0004252	82.00	gold quality
muscle of leg	UBERON:0001383	81.81	gold quality
right hemisphere of cerebellum	UBERON:0014890	81.65	gold quality
right atrium auricular region	UBERON:0006631	81.63	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	7.86

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.