ZNF263
gene geneOn this page
Also known as FPM315ZKSCAN12ZSCAN44
Summary
ZNF263 (zinc finger protein 263, HGNC:13056) is a protein-coding gene on chromosome 16p13.3, encoding Zinc finger protein 263 (O14978). Transcription factor that binds to the consensus sequence 5’-TCCTCCC-3’ and acts as a transcriptional repressor.
Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and transcription cis-regulatory region binding activity. Involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Located in nucleus.
Source: NCBI Gene 10127 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 120 total
- Transcription factor: yes — 12 downstream targets (CollecTRI)
- MANE Select transcript:
NM_005741
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:13056 |
| Approved symbol | ZNF263 |
| Name | zinc finger protein 263 |
| Location | 16p13.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FPM315, ZKSCAN12, ZSCAN44 |
| Ensembl gene | ENSG00000006194 |
| Ensembl biotype | protein_coding |
| OMIM | 604191 |
| Entrez | 10127 |
Gene structure
Transcript identifiers
Ensembl transcripts: 8 — 8 protein_coding
ENST00000219069, ENST00000572748, ENST00000573578, ENST00000574253, ENST00000574674, ENST00000575332, ENST00000575823, ENST00000703449
RefSeq mRNA: 2 — MANE Select: NM_005741
NM_001411015, NM_005741
CCDS: CCDS10499, CCDS92094
Canonical transcript exons
ENST00000219069 — 6 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000830618 | 3289393 | 3291460 |
| ENSE00002640130 | 3286023 | 3286149 |
| ENSE00002653913 | 3283491 | 3284205 |
| ENSE00003994561 | 3288454 | 3288570 |
| ENSE00003994562 | 3285059 | 3285239 |
| ENSE00003994565 | 3285681 | 3285754 |
Expression profiles
Bgee: expression breadth ubiquitous, 276 present calls, max score 91.38.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 11.5344 / max 56.0358, expressed in 1790 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 152417 | 11.2785 | 1788 |
| 152411 | 2.8462 | 770 |
| 152418 | 0.2559 | 101 |
Top tissues by expression
295 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| calcaneal tendon | UBERON:0003701 | 91.38 | gold quality |
| granulocyte | CL:0000094 | 89.90 | gold quality |
| left ovary | UBERON:0002119 | 89.86 | gold quality |
| cortical plate | UBERON:0005343 | 89.82 | gold quality |
| left uterine tube | UBERON:0001303 | 89.06 | gold quality |
| right ovary | UBERON:0002118 | 89.03 | gold quality |
| sural nerve | UBERON:0015488 | 88.95 | gold quality |
| right uterine tube | UBERON:0001302 | 88.69 | gold quality |
| ventricular zone | UBERON:0003053 | 88.68 | gold quality |
| mucosa of stomach | UBERON:0001199 | 88.50 | gold quality |
| ganglionic eminence | UBERON:0004023 | 88.41 | gold quality |
| body of stomach | UBERON:0001161 | 88.40 | gold quality |
| right coronary artery | UBERON:0001625 | 88.34 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 88.27 | gold quality |
| popliteal artery | UBERON:0002250 | 88.22 | gold quality |
| tibial artery | UBERON:0007610 | 88.22 | gold quality |
| islet of Langerhans | UBERON:0000006 | 88.05 | gold quality |
| pituitary gland | UBERON:0000007 | 88.01 | gold quality |
| adenohypophysis | UBERON:0002196 | 87.94 | gold quality |
| body of uterus | UBERON:0009853 | 87.81 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 87.60 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 87.55 | gold quality |
| cerebellar cortex | UBERON:0002129 | 87.51 | gold quality |
| aorta | UBERON:0000947 | 87.47 | gold quality |
| skin of leg | UBERON:0001511 | 87.39 | gold quality |
| ovary | UBERON:0000992 | 87.35 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 87.34 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 87.28 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 87.24 | gold quality |
| stomach | UBERON:0000945 | 87.21 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-75367 | yes | 82.66 |
| E-MTAB-6142 | no | 80.10 |
| E-ANND-3 | no | 4.25 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
12 targets.
| Target | Regulation |
|---|---|
| ALOX5 | |
| ASXL1 | |
| COL11A2 | |
| FOXA1 | Repression |
| GAD1 | |
| NFKB | |
| NT5E | |
| RELN | |
| RGS19 | |
| SART3 | |
| TPM1 | |
| ZFP42 |
JASPAR motifs
| Motif | Name | Family |
|---|---|---|
| MA0528.1 | ZNF263 | More than 3 adjacent zinc fingers |
| MA0528.2 | ZNF263 | More than 3 adjacent zinc fingers |
| MA0528.3 | ZNF263 | More than 3 adjacent zinc fingers |
JASPAR matrix evidence (PMIDs): PMID:19887448
Literature-anchored findings (GeneRIF, showing 8)
- Genomic targets of the KRAB and SCAN domain-containing zinc finger protein 263. (PMID:19887448)
- The EGFR-ZNF263 signaling axis silences SIX3 in glioblastoma epigenetically. (PMID:32051553)
- ZNF263 is a transcriptional regulator of heparin and heparan sulfate biosynthesis. (PMID:32277030)
- Circular RNA FOXP1 Induced by ZNF263 Upregulates U2AF2 Expression to Accelerate Renal Cell Carcinoma Tumorigenesis and Warburg Effect through Sponging miR-423-5p. (PMID:34514002)
- Chromatin-associated OGT promotes the malignant progression of hepatocellular carcinoma by activating ZNF263. (PMID:37353617)
- Zinc finger protein 263 upregulates interleukin 33 and suppresses autophagy to accelerate the malignant progression of non-small cell lung cancer. (PMID:37821764)
- Transcription factor ZNF263 enhances EGFR-targeted therapeutic response and reduces residual disease in lung adenocarcinoma. (PMID:38335093)
- Zinc finger protein 263 promotes colorectal cancer cell progression by activating STAT3 and enhancing chemoradiotherapy resistance. (PMID:39294234)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Zfp263 | ENSMUSG00000022529 |
| rattus_norvegicus | Zfp263 | ENSRNOG00000007678 |
Paralogs (30): ZNF213 (ENSG00000085644), ZNF500 (ENSG00000103199), ZKSCAN1 (ENSG00000106261), ZNF205 (ENSG00000122386), ZSCAN9 (ENSG00000137185), PGBD1 (ENSG00000137338), ZNF215 (ENSG00000149054), ZSCAN12 (ENSG00000158691), ZNF394 (ENSG00000160908), ZNF75A (ENSG00000162086), ZSCAN21 (ENSG00000166529), ZNF232 (ENSG00000167840), ZNF24 (ENSG00000172466), ZNF449 (ENSG00000173275), ZSCAN4 (ENSG00000180532), ZSCAN22 (ENSG00000182318), ZNF75D (ENSG00000186376), ZNF396 (ENSG00000186496), ZNF397 (ENSG00000186812), ZSCAN30 (ENSG00000186814), ZKSCAN4 (ENSG00000187626), ZSCAN23 (ENSG00000187987), ZKSCAN3 (ENSG00000189298), ZSCAN16 (ENSG00000196812), ZSCAN25 (ENSG00000197037), ZSCAN26 (ENSG00000197062), ZNF165 (ENSG00000197279), ZKSCAN8 (ENSG00000198315), ZSCAN31 (ENSG00000235109), ZNF853 (ENSG00000236609)
Protein
Protein identifiers
Zinc finger protein 263 — O14978 (reviewed: O14978)
Alternative names: Zinc finger protein FPM315, Zinc finger protein with KRAB and SCAN domains 12
All UniProt accessions (7): O14978, B4DI05, D3DUC1, I3L0N0, I3L2X3, I3L393, I3NI39
UniProt curated annotations — full annotation on UniProt →
Function. Transcription factor that binds to the consensus sequence 5’-TCCTCCC-3’ and acts as a transcriptional repressor. Binds to the promoter region of SIX3 and recruits other proteins involved in chromatin modification and transcriptional corepression, resulting in methylation of the promoter and transcriptional repression. Acts as a transcriptional repressor of HS3ST1 and HS3ST3A1 via binding to gene promoter regions.
Subunit / interactions. Interacts with a number of proteins involved in chromatin modification and transcriptional corepression including DNMT1, DNMT3A, HDAC2, PHF8, TRIM28/KAP1, SETDB1, EZH2, UHRF1, CBX3/HP1-gamma, and CBX5/HP1-alpha; recruits these proteins to the SIX3 promoter region, leading to SIX3 transcriptional repression. Interacts with MAPK3/ERK1 and MAPK1/ERK2.
Subcellular location. Nucleus.
Tissue specificity. Expressed in heart, brain, placenta, lung, liver, skeletal muscle, kidney, pancreas, spleen, thymus, prostate, testis, ovary, small intestine, colon and leukocyte.
Post-translational modifications. Ubiquitinated, leading to proteasomal degradation.
Miscellaneous. May be involved in the EGFR-mediated promotion of invasion and anchorage-independent growth in glioblastomas via silencing of SIX3. May act as a prognostic indicator in glioblastoma patients, with increased expression correlating with poor prognosis.
Similarity. Belongs to the krueppel C2H2-type zinc-finger protein family.
RefSeq proteins (2): NP_001397944, NP_005732* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001909 | KRAB | Domain |
| IPR003309 | SCAN_dom | Domain |
| IPR013087 | Znf_C2H2_type | Domain |
| IPR036051 | KRAB_dom_sf | Homologous_superfamily |
| IPR036236 | Znf_C2H2_sf | Homologous_superfamily |
| IPR038269 | SCAN_sf | Homologous_superfamily |
Pfam: PF00096, PF01352, PF02023, PF13465
UniProt features (30 total): zinc finger region 9, cross-link 7, sequence variant 4, region of interest 3, domain 2, modified residue 2, chain 1, compositionally biased region 1, sequence conflict 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O14978-F1 | 61.19 | 0.09 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (9): 166, 178, 17, 157, 285, 299, 376, 573, 582
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-212436 | Generic Transcription Pathway |
MSigDB gene sets: 107 (showing top):
ENK_UV_RESPONSE_KERATINOCYTE_UP, DACOSTA_UV_RESPONSE_VIA_ERCC3_UP, BROWNE_HCMV_INFECTION_12HR_UP, PAX2_01, DACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_UP, GATA1_03, SCHLOSSER_MYC_TARGETS_AND_SERUM_RESPONSE_UP, MODULE_204, MYB_Q5_01, RIZKI_TUMOR_INVASIVENESS_3D_UP, BROWNE_HCMV_INFECTION_14HR_UP, LAIHO_COLORECTAL_CANCER_SERRATED_DN, GENTILE_UV_LOW_DOSE_UP, MOREAUX_MULTIPLE_MYELOMA_BY_TACI_UP, GOMF_SEQUENCE_SPECIFIC_DNA_BINDING
GO Biological Process (4): negative regulation of transcription by RNA polymerase II (GO:0000122), regulation of DNA-templated transcription (GO:0006355), regulation of transcription by RNA polymerase II (GO:0006357), positive regulation of transcription by RNA polymerase II (GO:0045944)
GO Molecular Function (11): transcription cis-regulatory region binding (GO:0000976), RNA polymerase II cis-regulatory region sequence-specific DNA binding (GO:0000978), DNA-binding transcription factor activity, RNA polymerase II-specific (GO:0000981), DNA-binding transcription repressor activity, RNA polymerase II-specific (GO:0001227), DNA-binding transcription factor activity (GO:0003700), zinc ion binding (GO:0008270), sequence-specific DNA binding (GO:0043565), sequence-specific double-stranded DNA binding (GO:1990837), DNA binding (GO:0003677), protein binding (GO:0005515), metal ion binding (GO:0046872)
GO Cellular Component (1): nucleus (GO:0005634)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| RNA Polymerase II Transcription | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| regulation of transcription by RNA polymerase II | 3 |
| transcription by RNA polymerase II | 3 |
| RNA polymerase II transcription regulatory region sequence-specific DNA binding | 3 |
| regulation of DNA-templated transcription | 2 |
| negative regulation of DNA-templated transcription | 1 |
| DNA-templated transcription | 1 |
| regulation of gene expression | 1 |
| regulation of RNA biosynthetic process | 1 |
| positive regulation of DNA-templated transcription | 1 |
| transcription regulatory region nucleic acid binding | 1 |
| sequence-specific double-stranded DNA binding | 1 |
| cis-regulatory region sequence-specific DNA binding | 1 |
| chromatin | 1 |
| DNA-binding transcription factor activity | 1 |
| negative regulation of transcription by RNA polymerase II | 1 |
| DNA-binding transcription factor activity, RNA polymerase II-specific | 1 |
| DNA-binding transcription repressor activity | 1 |
| transcription cis-regulatory region binding | 1 |
| transcription regulator activity | 1 |
| transition metal ion binding | 1 |
| DNA binding | 1 |
| double-stranded DNA binding | 1 |
| sequence-specific DNA binding | 1 |
| nucleic acid binding | 1 |
| binding | 1 |
| cation binding | 1 |
| intracellular membrane-bounded organelle | 1 |
Protein interactions and networks
STRING
1536 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ZNF263 | FOXA1 | P55317 | 543 |
| ZNF263 | RAD21 | O60216 | 528 |
| ZNF263 | STAT3 | P40763 | 510 |
| ZNF263 | SMC3 | Q9UQE7 | 505 |
| ZNF263 | JUN | P05412 | 486 |
| ZNF263 | MEFV | O15553 | 479 |
| ZNF263 | ZKSCAN2 | Q63HK3 | 462 |
| ZNF263 | FOXA2 | Q9Y261 | 453 |
| ZNF263 | TAL1 | P17542 | 445 |
| ZNF263 | SPI1 | P17947 | 442 |
| ZNF263 | HOXB13 | Q92826 | 440 |
| ZNF263 | TIGD7 | Q6NT04 | 431 |
| ZNF263 | GATB | O75879 | 429 |
| ZNF263 | NFKB1 | P19838 | 429 |
| ZNF263 | L3MBTL4 | Q8NA19 | 425 |
IntAct
61 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ZNF263 | TRIM41 | psi-mi:“MI:0915”(physical association) | 0.800 |
| ZNF263 | SCAND1 | psi-mi:“MI:0915”(physical association) | 0.800 |
| CLK2 | ZNF263 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF263 | CLK3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GPATCH2L | ZNF263 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF263 | TCAF1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF263 | CLK2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TCAF1 | ZNF263 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CLK3 | ZNF263 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF263 | GPATCH2L | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF263 | ZNF165 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF263 | PPL | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF263 | JAKMIP2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF263 | ZSCAN22 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF263 | LNX1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SUFU | ZNF263 | psi-mi:“MI:0915”(physical association) | 0.550 |
| ZNF263 | SUFU | psi-mi:“MI:0915”(physical association) | 0.550 |
| ZNF263 | AHCYL1 | psi-mi:“MI:0914”(association) | 0.530 |
| PCBD1 | ZNF263 | psi-mi:“MI:0915”(physical association) | 0.370 |
| ZNF263 | ZSCAN1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| ZNF263 | EFEMP2 | psi-mi:“MI:0915”(physical association) | 0.370 |
| ZNF263 | ZNF446 | psi-mi:“MI:0915”(physical association) | 0.370 |
| ZNF263 | SPG21 | psi-mi:“MI:0915”(physical association) | 0.370 |
BioGRID (213): ZNF263 (Two-hybrid), ZNF263 (Two-hybrid), ZNF263 (Two-hybrid), GPATCH2L (Two-hybrid), ZNF263 (Affinity Capture-MS), ZNF263 (Affinity Capture-MS), EFEMP2 (Two-hybrid), ZNF446 (Two-hybrid), SPG21 (Two-hybrid), TRIM41 (Two-hybrid), SCAND1 (Two-hybrid), ZNF263 (Two-hybrid), NME7 (Two-hybrid), SUFU (Two-hybrid), PLEKHF2 (Two-hybrid)
ESM2 similar proteins: A1A5P9, A2AVR2, A6QPT6, B2KFW1, O14978, P17029, P17040, P17098, P25233, P70503, Q13342, Q14D33, Q3SYK4, Q3V3Q4, Q4KLI1, Q4R8H9, Q4V8E9, Q5PPP4, Q5R670, Q5R7U0, Q5VWK0, Q61066, Q63HK3, Q68CQ1, Q6PCZ4, Q7TS72, Q80ZG2, Q8BGS3, Q8CF60, Q8IWY8, Q8N660, Q8NDZ0, Q8TD17, Q921B4, Q923B3, Q96D09, Q96GC6, Q96JL9, Q96M43, Q99608
Diamond homologs: A1YEP8, A1YEQ3, A1YEV9, A1YFW2, A1YFW6, A1YG26, A1YG48, A1YG60, A1YGJ4, A1YGK6, A2T6E3, A2T6V8, A2T6W2, A2T712, A2T736, A2T7D2, A2T7D7, A2T7F2, A2T7F4, A2T7L7, A2T812, A6QNZ0, A6QPT6, B2KFW1, O14709, O14771, O14978, O15535, O43309, O60304, O95125, P10073, P17022, P17028, P17029, P17040, P28698, P49910, P51815, P59923
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
120 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 106 |
| Likely benign | 5 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
971 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 16:3300638:A:T | acceptor_gain | 1.0000 |
| 16:3284203:CAGGT:C | donor_loss | 0.9900 |
| 16:3284204:AGG:A | donor_loss | 0.9900 |
| 16:3284206:GTGA:G | donor_loss | 0.9900 |
| 16:3284207:T:A | donor_loss | 0.9900 |
| 16:3285223:GGCT:G | donor_gain | 0.9900 |
| 16:3285224:GCTG:G | donor_gain | 0.9900 |
| 16:3285234:A:T | donor_gain | 0.9900 |
| 16:3285235:GAGGG:G | donor_gain | 0.9900 |
| 16:3285237:GGG:G | donor_gain | 0.9900 |
| 16:3285238:GGG:G | donor_gain | 0.9900 |
| 16:3286021:A:AG | acceptor_gain | 0.9900 |
| 16:3286022:G:GA | acceptor_gain | 0.9900 |
| 16:3286123:A:T | donor_gain | 0.9900 |
| 16:3289388:A:AG | acceptor_gain | 0.9900 |
| 16:3289389:C:G | acceptor_gain | 0.9900 |
| 16:3289389:CCA:C | acceptor_loss | 0.9900 |
| 16:3289390:CA:C | acceptor_loss | 0.9900 |
| 16:3289391:A:AC | acceptor_loss | 0.9900 |
| 16:3289391:A:AG | acceptor_gain | 0.9900 |
| 16:3289392:G:GG | acceptor_gain | 0.9900 |
| 16:3289392:GGA:G | acceptor_gain | 0.9900 |
| 16:3285763:G:T | donor_gain | 0.9800 |
| 16:3289388:ACCAG:A | acceptor_gain | 0.9800 |
| 16:3300637:C:CT | acceptor_gain | 0.9800 |
| 16:3284170:GA:G | donor_gain | 0.9700 |
| 16:3289392:GGAGA:G | acceptor_gain | 0.9700 |
| 16:3285215:G:T | donor_gain | 0.9600 |
| 16:3289391:AG:A | acceptor_gain | 0.9500 |
| 16:3289392:GG:G | acceptor_gain | 0.9500 |
AlphaMissense
4490 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 16:3289917:T:C | F471L | 0.999 |
| 16:3289919:C:A | F471L | 0.999 |
| 16:3289919:C:G | F471L | 0.999 |
| 16:3290001:T:C | F499L | 0.999 |
| 16:3290003:T:A | F499L | 0.999 |
| 16:3290003:T:G | F499L | 0.999 |
| 16:3290020:T:C | L505P | 0.999 |
| 16:3290028:C:G | H508D | 0.999 |
| 16:3290085:T:C | F527L | 0.999 |
| 16:3290087:C:A | F527L | 0.999 |
| 16:3290087:C:G | F527L | 0.999 |
| 16:3290340:T:C | F612L | 0.999 |
| 16:3290342:C:A | F612L | 0.999 |
| 16:3290342:C:G | F612L | 0.999 |
| 16:3290371:A:C | Q622P | 0.999 |
| 16:3290424:T:C | F640L | 0.999 |
| 16:3290426:C:A | F640L | 0.999 |
| 16:3290426:C:G | F640L | 0.999 |
| 16:3289833:T:C | F443L | 0.998 |
| 16:3289835:C:A | F443L | 0.998 |
| 16:3289835:C:G | F443L | 0.998 |
| 16:3289867:G:C | R454P | 0.998 |
| 16:3289936:T:C | L477P | 0.998 |
| 16:3289944:C:G | H480D | 0.998 |
| 16:3289946:C:A | H480Q | 0.998 |
| 16:3289946:C:G | H480Q | 0.998 |
| 16:3289958:C:A | H484Q | 0.998 |
| 16:3289958:C:G | H484Q | 0.998 |
| 16:3290002:T:C | F499S | 0.998 |
| 16:3290030:C:A | H508Q | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000184372 (16:3292719 G>A,T), RS1000360526 (16:3287300 C>T), RS1000455546 (16:3287204 G>A,C), RS1000743295 (16:3294549 T>C), RS1000762091 (16:3294088 G>C,T), RS1000792025 (16:3288170 T>C,G), RS1000921371 (16:3293956 C>T), RS1001357154 (16:3293052 G>A), RS1001378029 (16:3283208 T>C), RS1001487363 (16:3287571 C>G), RS1001521469 (16:3287851 T>C), RS1001576701 (16:3288633 G>A,T), RS1001627804 (16:3283232 A>T), RS1001633526 (16:3294214 C>T), RS1001750157 (16:3282856 G>A)
Disease associations
OMIM: gene MIM:604191 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
33 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Tobacco Smoke Pollution | increases expression | 2 |
| Aflatoxin B1 | decreases methylation, increases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| 3-((6-(2-methoxyphenyl)pyrimidin-4-yl)amino)phenyl)methane sulfonamide | decreases expression | 1 |
| FR900359 | increases phosphorylation | 1 |
| bisphenol F | affects cotreatment, decreases expression | 1 |
| TAK-243 | increases sumoylation | 1 |
| triphenyl phosphate | affects expression | 1 |
| geraniol | increases expression | 1 |
| sodium arsenite | increases expression | 1 |
| tamibarotene | decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| K 7174 | increases expression | 1 |
| PCI 5002 | affects cotreatment, increases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Cadmium | increases abundance, increases expression | 1 |
| Dexamethasone | affects cotreatment, decreases expression | 1 |
| Diazinon | increases methylation | 1 |
| Fluorouracil | affects expression | 1 |
| Indomethacin | affects cotreatment, decreases expression | 1 |
| Lead | affects expression | 1 |
| Plant Extracts | affects cotreatment, increases expression | 1 |
| Silver | increases expression | 1 |
| Smoke | decreases expression | 1 |
| Dronabinol | decreases expression | 1 |
| Thiram | increases expression | 1 |
| Tretinoin | decreases expression | 1 |
| Valproic Acid | increases expression | 1 |
| Zinc | affects cotreatment, increases expression | 1 |
Cellosaurus cell lines
4 cell lines: 3 embryonic stem cell, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_A8F6 | SEES3-1V human ZNF263, clone1 | Embryonic stem cell | Male |
| CVCL_A8F7 | SEES3-1V human ZNF263, clone2 | Embryonic stem cell | Male |
| CVCL_A8F8 | SEES3-1V human ZNF263, clone3 | Embryonic stem cell | Male |
| CVCL_D9W2 | Ubigene HEK293 ZNF263 KO | Transformed cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.