ZNF366
geneOn this page
Also known as FLJ39796
Summary
ZNF366 (zinc finger protein 366, HGNC:18316) is a protein-coding gene on chromosome 5q13.1, encoding Zinc finger protein 366 (Q8N895). Has transcriptional repression activity.
Enables nuclear estrogen receptor binding activity and transcription corepressor activity. Involved in negative regulation of intracellular estrogen receptor signaling pathway; negative regulation of transcription by RNA polymerase II; and response to estrogen. Located in nucleoplasm.
Source: NCBI Gene 167465 — RefSeq curated summary.
At a glance
- GWAS associations: 23
- Clinical variants (ClinVar): 145 total
- MANE Select transcript:
NM_152625
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:18316 |
| Approved symbol | ZNF366 |
| Name | zinc finger protein 366 |
| Location | 5q13.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FLJ39796 |
| Ensembl gene | ENSG00000178175 |
| Ensembl biotype | protein_coding |
| OMIM | 610159 |
| Entrez | 167465 |
Gene structure
Transcript identifiers
Ensembl transcripts: 5 — 4 protein_coding, 1 protein_coding_CDS_not_defined
ENST00000318442, ENST00000414109, ENST00000514477, ENST00000867840, ENST00000964997
RefSeq mRNA: 1 — MANE Select: NM_152625
NM_152625
CCDS: CCDS4015
Canonical transcript exons
ENST00000318442 — 5 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001258349 | 72447243 | 72447417 |
| ENSE00001258356 | 72456404 | 72456595 |
| ENSE00001258377 | 72439903 | 72444291 |
| ENSE00001258386 | 72460165 | 72461510 |
| ENSE00002028089 | 72507251 | 72507410 |
Expression profiles
Bgee: expression breadth ubiquitous, 157 present calls, max score 76.26.
FANTOM5 (CAGE): breadth broad, TPM avg 2.3596 / max 165.5908, expressed in 371 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 62040 | 2.3248 | 369 |
| 203585 | 0.0348 | 9 |
Top tissues by expression
246 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| sural nerve | UBERON:0015488 | 76.26 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 75.58 | gold quality |
| colonic epithelium | UBERON:0000397 | 73.42 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 73.06 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 72.93 | gold quality |
| apex of heart | UBERON:0002098 | 71.98 | gold quality |
| omental fat pad | UBERON:0010414 | 70.68 | gold quality |
| peritoneum | UBERON:0002358 | 70.60 | gold quality |
| vermiform appendix | UBERON:0001154 | 70.39 | gold quality |
| heart left ventricle | UBERON:0002084 | 69.88 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 69.09 | gold quality |
| cardiac ventricle | UBERON:0002082 | 68.94 | gold quality |
| lymph node | UBERON:0000029 | 68.05 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 68.02 | gold quality |
| muscle of leg | UBERON:0001383 | 67.88 | gold quality |
| monocyte | CL:0000576 | 67.74 | gold quality |
| leukocyte | CL:0000738 | 67.41 | gold quality |
| gall bladder | UBERON:0002110 | 67.29 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 67.26 | gold quality |
| gastrocnemius | UBERON:0001388 | 67.16 | gold quality |
| body of uterus | UBERON:0009853 | 66.90 | gold quality |
| heart | UBERON:0000948 | 66.62 | gold quality |
| right atrium auricular region | UBERON:0006631 | 66.41 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 65.53 | gold quality |
| cardiac atrium | UBERON:0002081 | 65.34 | gold quality |
| right lung | UBERON:0002167 | 65.33 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 64.91 | gold quality |
| calcaneal tendon | UBERON:0003701 | 64.75 | gold quality |
| upper lobe of lung | UBERON:0008948 | 64.63 | gold quality |
| caecum | UBERON:0001153 | 63.89 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-9801 | yes | 8.36 |
| E-MTAB-6678 | yes | 7.54 |
| E-ANND-3 | yes | 4.59 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
135 targeting ZNF366, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-29A-3P | 100.00 | 73.11 | 1835 |
| HSA-MIR-29B-3P | 100.00 | 73.18 | 1833 |
| HSA-MIR-29C-3P | 100.00 | 73.15 | 1833 |
| HSA-MIR-200B-3P | 100.00 | 73.31 | 2693 |
| HSA-MIR-200C-3P | 100.00 | 73.35 | 2685 |
| HSA-MIR-429 | 100.00 | 73.44 | 2698 |
| HSA-MIR-4455 | 100.00 | 65.48 | 1587 |
| HSA-MIR-186-5P | 99.99 | 70.83 | 3707 |
| HSA-MIR-6759-5P | 99.99 | 66.54 | 785 |
| HSA-MIR-513B-5P | 99.99 | 69.96 | 2150 |
| HSA-MIR-3688-3P | 99.97 | 72.02 | 2834 |
| HSA-MIR-6793-5P | 99.97 | 65.95 | 758 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-7152-3P | 99.97 | 67.47 | 849 |
| HSA-MIR-1250-3P | 99.96 | 70.04 | 4038 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-551B-5P | 99.96 | 71.28 | 3493 |
| HSA-MIR-3912-5P | 99.95 | 66.11 | 925 |
| HSA-MIR-767-5P | 99.95 | 70.85 | 993 |
| HSA-MIR-6835-3P | 99.93 | 70.49 | 2904 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-450B-5P | 99.92 | 71.48 | 3175 |
| HSA-MIR-498-3P | 99.91 | 71.27 | 1114 |
| HSA-MIR-1305 | 99.91 | 71.43 | 3443 |
| HSA-MIR-8063 | 99.91 | 69.76 | 3146 |
Literature-anchored findings (GeneRIF, showing 10)
- DC-SCRIPT consists of a proline-rich region, 11 C2H2-type zinc fingers, and an acidic region. Localization studies reveal that DC-SCRIPT resides in the nucleus and that nuclear localization is critically dependent on the zinc fingers. (DC-SCRIPT) (PMID:16393996)
- Results indicate that ZNF366 may play an important role in regulating the expression of genes in response to estrogen. (PMID:17085477)
- Identification of ZNF366 and PTPRD as novel determinants of plasma homocysteine in a family-based genome-wide association study (PMID:19525478)
- DC-SCRIPT can act as a tumor suppressor in breast cancer development.[review] (PMID:20478364)
- study provides a higher level of evidence that DC-SCRIPT is indeed an independent, pure prognostic, factor for primary breast cancer and shows that DC-SCRIPT mRNA expression is most informative for either ESR1-positive and/or ESR2-low pT1 tumors (PMID:21122099)
- DC-SCRIPT is a key regulator of androgen receptor and vitamin d receptor that play an opposite role in prostate cancer etiology and loss of DC-SCRIPT may be involved in the onset of prostate cancer. (PMID:22473304)
- DC-SCRIPT has a primary role in the regulation of interleukin (IL)-10 production by monocytes. (PMID:22615205)
- DC-SCRIPT serves an important role in regulating GR function in DCs, corepressing GR-dependent upregulation of the tolerance-inducing transcription factor GILZ. (PMID:23440419)
- these data show that DC-SCRIPT acts as a novel regulator of CDKN2B and induces cell cycle arrest in ESR1-positive breast cancer cells. (PMID:25663546)
- These data demonstrate that besides nuclear receptor regulation, DC-SCRIPT also modulates activation of NF-kappaBp65 after TLR activation in human DCs. (PMID:26170389)
Cross-species orthologs
6 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | znf366 | ENSDARG00000040116 |
| mus_musculus | Zfp366 | ENSMUSG00000050919 |
| rattus_norvegicus | Zfp366 | ENSRNOG00000017249 |
| drosophila_melanogaster | CG11902 | FBGN0028647 |
| drosophila_melanogaster | CG11696 | FBGN0030314 |
| drosophila_melanogaster | CG10631 | FBGN0032817 |
Paralogs (7): ZNF671 (ENSG00000083814), ZNF710 (ENSG00000140548), ZNF212 (ENSG00000170260), ZNF662 (ENSG00000182983), ZNF667 (ENSG00000198046), ZNF783 (ENSG00000204946), ZNF865 (ENSG00000261221)
Protein
Protein identifiers
Zinc finger protein 366 — Q8N895 (reviewed: Q8N895)
Alternative names: Dendritic cell-specific transcript protein
All UniProt accessions (2): Q8N895, F8W732
UniProt curated annotations — full annotation on UniProt →
Function. Has transcriptional repression activity. Acts as a corepressor of ESR1; the function seems to involve CTBP1 and histone deacetylases.
Subunit / interactions. Interacts with ESR1 and NRIP1. Interacts (via PXDLS motif) with CTBP1.
Subcellular location. Nucleus.
Tissue specificity. Expressed in immature and mature dendritic cells (DCs). Not detected in other blood cell types.
RefSeq proteins (1): NP_689838* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR013087 | Znf_C2H2_type | Domain |
| IPR036236 | Znf_C2H2_sf | Homologous_superfamily |
| IPR050636 | C2H2-ZF_domain-containing | Family |
Pfam: PF00096, PF13912
UniProt features (25 total): zinc finger region 11, mutagenesis site 6, region of interest 4, chain 1, short sequence motif 1, compositionally biased region 1, sequence variant 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8N895-F1 | 57.54 | 0.15 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Mutagenesis-validated functional residues (6):
| Position | Phenotype |
|---|---|
| 590 | abolishes interaction with ctbp1 and in part relieves transcription repression; when associated with a-592. |
| 592 | abolishes interaction with ctbp1 and in part relieves transcription repression; when associated with a-590. |
| 593 | abolishes interaction with ctbp1. abolishes interaction with ctbp1; when associated with a-648. |
| 645 | decreases interaction with ctbp1; when associated with a-647. |
| 647 | decreases interaction with ctbp1; when associated with a-645. |
| 648 | no effect on interaction with ctbp1. abolishes interaction with ctbp1; when associated with a-593. |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 91 (showing top):
GSE18804_BRAIN_VS_COLON_TUMORAL_MACROPHAGE_DN, GOBP_CELLULAR_RESPONSE_TO_LIPID, GOBP_NEGATIVE_REGULATION_OF_INTRACELLULAR_ESTROGEN_RECEPTOR_SIGNALING_PATHWAY, GOBP_REGULATION_OF_INTRACELLULAR_STEROID_HORMONE_RECEPTOR_SIGNALING_PATHWAY, FOXO4_01, LHX3_01, FOXO1_01, GOBP_NEGATIVE_REGULATION_OF_INTRACELLULAR_SIGNAL_TRANSDUCTION, GOBP_HORMONE_MEDIATED_SIGNALING_PATHWAY, CCANNAGRKGGC_UNKNOWN, GOBP_NEGATIVE_REGULATION_OF_INTRACELLULAR_STEROID_HORMONE_RECEPTOR_SIGNALING_PATHWAY, GOBP_REGULATION_OF_INTRACELLULAR_ESTROGEN_RECEPTOR_SIGNALING_PATHWAY, GOBP_CELLULAR_RESPONSE_TO_HORMONE_STIMULUS, GOBP_RESPONSE_TO_ESTROGEN, OCT1_06
GO Biological Process (3): negative regulation of transcription by RNA polymerase II (GO:0000122), negative regulation of intracellular estrogen receptor signaling pathway (GO:0033147), response to estrogen (GO:0043627)
GO Molecular Function (8): RNA polymerase II cis-regulatory region sequence-specific DNA binding (GO:0000978), DNA-binding transcription factor activity (GO:0003700), transcription corepressor activity (GO:0003714), zinc ion binding (GO:0008270), nuclear estrogen receptor binding (GO:0030331), DNA binding (GO:0003677), protein binding (GO:0005515), metal ion binding (GO:0046872)
GO Cellular Component (2): nucleus (GO:0005634), nucleoplasm (GO:0005654)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| negative regulation of DNA-templated transcription | 2 |
| regulation of transcription by RNA polymerase II | 1 |
| transcription by RNA polymerase II | 1 |
| estrogen receptor signaling pathway | 1 |
| negative regulation of intracellular steroid hormone receptor signaling pathway | 1 |
| regulation of intracellular estrogen receptor signaling pathway | 1 |
| response to hormone | 1 |
| RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1 |
| cis-regulatory region sequence-specific DNA binding | 1 |
| transcription cis-regulatory region binding | 1 |
| regulation of DNA-templated transcription | 1 |
| transcription regulator activity | 1 |
| transcription coregulator activity | 1 |
| transition metal ion binding | 1 |
| nuclear receptor binding | 1 |
| nucleic acid binding | 1 |
| binding | 1 |
| cation binding | 1 |
| intracellular membrane-bounded organelle | 1 |
| nuclear lumen | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
806 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ZNF366 | CTBP1 | Q13363 | 775 |
| ZNF366 | TMEM171 | Q8WVE6 | 537 |
| ZNF366 | OR5M8 | Q8NGP6 | 474 |
| ZNF366 | UBOX5 | O94941 | 458 |
| ZNF366 | ZNF654 | Q8IZM8 | 456 |
| ZNF366 | LZTS3 | O60299 | 448 |
| ZNF366 | NRIP1 | P48552 | 441 |
| ZNF366 | TMEM174 | Q8WUU8 | 430 |
| ZNF366 | THNSL2 | Q86YJ6 | 428 |
| ZNF366 | DDRGK1 | Q96HY6 | 426 |
| ZNF366 | BTBD9 | Q96Q07 | 426 |
| ZNF366 | DCLK3 | Q9C098 | 415 |
| ZNF366 | TADA3 | O75528 | 400 |
| ZNF366 | HLX | Q14774 | 393 |
| ZNF366 | SMYD1 | Q8NB12 | 393 |
IntAct
127 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ZNF366 | CEP70 | psi-mi:“MI:0915”(physical association) | 0.830 |
| CEP70 | ZNF366 | psi-mi:“MI:0915”(physical association) | 0.830 |
| PSMA3 | ZNF366 | psi-mi:“MI:0915”(physical association) | 0.740 |
| ESR1 | ZNF366 | psi-mi:“MI:0915”(physical association) | 0.630 |
| ZNF366 | ESR1 | psi-mi:“MI:0915”(physical association) | 0.630 |
| ESR1 | ZNF366 | psi-mi:“MI:0407”(direct interaction) | 0.630 |
| CTBP1 | ZNF366 | psi-mi:“MI:0407”(direct interaction) | 0.630 |
| CTBP1 | ZNF366 | psi-mi:“MI:0915”(physical association) | 0.630 |
| ZNF366 | CTBP1 | psi-mi:“MI:0915”(physical association) | 0.630 |
| ZNF366 | ESR1 | psi-mi:“MI:0407”(direct interaction) | 0.630 |
| TARDBP | ZNF366 | psi-mi:“MI:0915”(physical association) | 0.610 |
| ZNF366 | CARD10 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF366 | AKAP8L | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF366 | A2M | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF366 | APBB2 | psi-mi:“MI:0915”(physical association) | 0.560 |
BioGRID (9): ZNF366 (Two-hybrid), ZNF366 (Two-hybrid), PSMA3 (Two-hybrid), ZNF366 (Two-hybrid), ZNF366 (Two-hybrid), ZNF366 (Two-hybrid), ZNF366 (Two-hybrid), KLHL15 (Affinity Capture-MS), UBE3A (Affinity Capture-MS)
ESM2 similar proteins: A0JPB4, A0PJY2, A1YPR0, A2A935, A4IFJ6, B0K011, B7ZRM8, B7ZRU9, O13089, O15090, O57415, O75626, P14404, P41182, P41183, P86413, Q03112, Q03267, Q05516, Q08DS3, Q0VDQ9, Q13422, Q15911, Q5XJQ7, Q60636, Q61329, Q62255, Q66JF8, Q6DBW0, Q6NS86, Q86UP3, Q86V15, Q8C208, Q8I7Z8, Q8K083, Q8N895, Q8TAX0, Q8VCZ7, Q8VDL9, Q90277
Diamond homologs: Q3U288, Q6NS86, Q8N1W2, Q8N895
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
145 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 131 |
| Likely benign | 4 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1306 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 5:72447239:TTACC:T | donor_loss | 1.0000 |
| 5:72447240:TACCT:T | donor_loss | 1.0000 |
| 5:72447241:ACCTT:A | donor_loss | 1.0000 |
| 5:72447242:CCTT:C | donor_loss | 1.0000 |
| 5:72447413:CAAAG:C | acceptor_gain | 1.0000 |
| 5:72447416:AG:A | acceptor_gain | 1.0000 |
| 5:72447417:GC:G | acceptor_loss | 1.0000 |
| 5:72447418:C:CA | acceptor_loss | 1.0000 |
| 5:72444291:CCTG:C | acceptor_loss | 0.9900 |
| 5:72444292:C:CC | acceptor_gain | 0.9900 |
| 5:72444292:CTGCA:C | acceptor_loss | 0.9900 |
| 5:72444293:T:C | acceptor_loss | 0.9900 |
| 5:72447414:AAAG:A | acceptor_gain | 0.9900 |
| 5:72447415:AAG:A | acceptor_gain | 0.9900 |
| 5:72447418:C:CC | acceptor_gain | 0.9900 |
| 5:72447421:T:C | acceptor_gain | 0.9900 |
| 5:72447421:T:TC | acceptor_gain | 0.9900 |
| 5:72448034:C:CT | acceptor_gain | 0.9900 |
| 5:72448035:A:T | acceptor_gain | 0.9900 |
| 5:72448038:C:CT | acceptor_gain | 0.9900 |
| 5:72456399:CCCA:C | donor_loss | 0.9900 |
| 5:72456400:CCA:C | donor_loss | 0.9900 |
| 5:72456401:CAC:C | donor_loss | 0.9900 |
| 5:72456402:A:C | donor_loss | 0.9900 |
| 5:72456421:T:TA | donor_gain | 0.9900 |
| 5:72456421:TC:T | donor_gain | 0.9900 |
| 5:72456592:CACC:C | acceptor_gain | 0.9900 |
| 5:72456594:CC:C | acceptor_gain | 0.9900 |
| 5:72456595:CC:C | acceptor_gain | 0.9900 |
| 5:72456595:CCTG:C | acceptor_loss | 0.9900 |
AlphaMissense
4975 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 5:72447289:G:C | H551Q | 1.000 |
| 5:72447289:G:T | H551Q | 1.000 |
| 5:72447291:G:C | H551D | 1.000 |
| 5:72447299:A:G | L548P | 1.000 |
| 5:72447301:G:C | N547K | 1.000 |
| 5:72447301:G:T | N547K | 1.000 |
| 5:72447305:C:T | G546E | 1.000 |
| 5:72447306:C:G | G546R | 1.000 |
| 5:72447306:C:T | G546R | 1.000 |
| 5:72447311:A:G | L544P | 1.000 |
| 5:72447316:G:C | F542L | 1.000 |
| 5:72447316:G:T | F542L | 1.000 |
| 5:72447317:A:G | F542S | 1.000 |
| 5:72447318:A:G | F542L | 1.000 |
| 5:72447328:G:C | C538W | 1.000 |
| 5:72447330:A:G | C538R | 1.000 |
| 5:72447337:G:C | C535W | 1.000 |
| 5:72447339:A:G | C535R | 1.000 |
| 5:72447343:G:C | F533L | 1.000 |
| 5:72447343:G:T | F533L | 1.000 |
| 5:72447345:A:G | F533L | 1.000 |
| 5:72447361:G:C | H527Q | 1.000 |
| 5:72447361:G:T | H527Q | 1.000 |
| 5:72447363:G:C | H527D | 1.000 |
| 5:72447365:A:G | L526P | 1.000 |
| 5:72447373:G:C | H523Q | 1.000 |
| 5:72447373:G:T | H523Q | 1.000 |
| 5:72447374:T:C | H523R | 1.000 |
| 5:72447375:G:C | H523D | 1.000 |
| 5:72447375:G:T | H523N | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000032618 (5:72502034 A>C,G), RS1000051475 (5:72459258 C>G), RS1000084919 (5:72466143 T>A), RS1000118851 (5:72503384 T>C), RS1000173744 (5:72462946 T>A), RS1000180850 (5:72504348 C>G), RS1000256759 (5:72465021 G>A), RS1000279346 (5:72492005 G>A), RS1000468800 (5:72442141 C>T), RS1000507729 (5:72461910 C>A,T), RS1000518171 (5:72457669 T>C), RS1000623866 (5:72461480 T>C), RS1000671216 (5:72508804 T>G), RS1000751351 (5:72490064 G>A), RS1000785411 (5:72509077 C>A,G,T)
Disease associations
OMIM: gene MIM:610159 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
23 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000101_10 | Hip geometry | 6.000000e-07 |
| GCST003654_8 | Bone mineral density (Ward’s triangle area) | 2.000000e-06 |
| GCST004625_13 | Monocyte count | 4.000000e-10 |
| GCST005580_261 | Intraocular pressure | 2.000000e-10 |
| GCST005580_84 | Intraocular pressure | 3.000000e-11 |
| GCST006291_97 | Spherical equivalent or myopia (age of diagnosis) | 7.000000e-09 |
| GCST006979_105 | Heel bone mineral density | 5.000000e-10 |
| GCST007843_8 | Rheumatoid arthritis | 3.000000e-10 |
| GCST007995_22 | Asthma (childhood onset) | 5.000000e-08 |
| GCST008508_1 | Stress sensitivity (neuroticism score x major depressive disorder status interaction) | 3.000000e-06 |
| GCST010002_30 | Refractive error | 1.000000e-12 |
| GCST010243_1 | Apolipoprotein B levels | 4.000000e-15 |
| GCST010245_109 | LDL cholesterol levels | 1.000000e-13 |
| GCST90002389_205 | Lymphocyte percentage of white cells | 5.000000e-17 |
| GCST90002389_206 | Lymphocyte percentage of white cells | 9.000000e-14 |
| GCST90002393_151 | Monocyte count | 8.000000e-14 |
| GCST90002393_152 | Monocyte count | 5.000000e-09 |
| GCST90002398_468 | Neutrophil count | 1.000000e-24 |
| GCST90002398_469 | Neutrophil count | 9.000000e-12 |
| GCST90002399_393 | Neutrophil percentage of white cells | 2.000000e-21 |
| GCST90002407_459 | White blood cell count | 4.000000e-28 |
| GCST90013406_140 | Liver enzyme levels (alkaline phosphatase) | 3.000000e-14 |
| GCST90020029_1263 | Waist circumference adjusted for body mass index | 6.000000e-09 |
EFO canonical traits (14, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004685 | hip geometry |
| EFO:0007785 | femoral neck bone mineral density |
| EFO:0005091 | monocyte count |
| EFO:0004695 | intraocular pressure measurement |
| EFO:0004847 | age at onset |
| EFO:0009270 | heel bone mineral density |
| EFO:0007660 | neuroticism measurement |
| EFO:0004615 | apolipoprotein B measurement |
| EFO:0004611 | low density lipoprotein cholesterol measurement |
| EFO:0007993 | lymphocyte percentage of leukocytes |
| EFO:0004833 | neutrophil count |
| EFO:0007990 | neutrophil percentage of leukocytes |
| EFO:0004533 | alkaline phosphatase measurement |
| EFO:0007789 | BMI-adjusted waist circumference |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
10 total (human), top 10 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| GW 1929 | increases reaction, affects binding, increases activity | 1 |
| bisphenol S | increases methylation | 1 |
| Troglitazone | increases activity, increases reaction, affects binding | 1 |
| Arsenic | affects methylation | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
| Estradiol | decreases reaction, increases activity | 1 |
| Progesterone | decreases reaction, increases activity | 1 |
| Promegestone | decreases reaction, increases activity | 1 |
| Tobacco Smoke Pollution | increases expression | 1 |
| Tretinoin | affects binding, increases activity, increases reaction | 1 |
Cellosaurus cell lines
1 cell lines: 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_XW38 | HEK293 eGFP-ZNF366 | Transformed cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): refractive error