ZNF518B
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Also known as KIAA1729
Summary
ZNF518B (zinc finger protein 518B, HGNC:29365) is a protein-coding gene on chromosome 4p16.1, encoding Zinc finger protein 518B (Q9C0D4). Through its association with the EHMT1-EHMT2/G9A and PRC2/EED-EZH2 histone methyltransferase complexes may function in gene silencing, regulating repressive post-translational methylation of histone tails at promoters of target genes.
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus.
Source: NCBI Gene 85460 — RefSeq curated summary.
At a glance
- Gene–disease (curated): schizophrenia (No Known Disease Relationship, GenCC)
- GWAS associations: 4
- Clinical variants (ClinVar): 195 total
- MANE Select transcript:
NM_053042
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:29365 |
| Approved symbol | ZNF518B |
| Name | zinc finger protein 518B |
| Location | 4p16.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | KIAA1729 |
| Ensembl gene | ENSG00000178163 |
| Ensembl biotype | protein_coding |
| OMIM | 617734 |
| Entrez | 85460 |
Gene structure
Transcript identifiers
Ensembl transcripts: 16 — 13 protein_coding, 2 retained_intron, 1 protein_coding_CDS_not_defined
ENST00000326756, ENST00000500268, ENST00000503068, ENST00000507515, ENST00000515072, ENST00000908724, ENST00000908725, ENST00000908726, ENST00000918783, ENST00000966268, ENST00000966269, ENST00000966270, ENST00000966271, ENST00000966272, ENST00000966273, ENST00000966274
RefSeq mRNA: 3 — MANE Select: NM_053042
NM_001375816, NM_001375817, NM_053042
CCDS: CCDS33960
Canonical transcript exons
ENST00000326756 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001289064 | 10439880 | 10446539 |
| ENSE00001492103 | 10454805 | 10454988 |
| ENSE00002084345 | 10457317 | 10457426 |
Expression profiles
Bgee: expression breadth ubiquitous, 240 present calls, max score 90.96.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 9.6483 / max 91.0908, expressed in 1599 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 51373 | 7.0503 | 1576 |
| 51372 | 2.5980 | 1235 |
Top tissues by expression
250 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 90.96 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 90.84 | silver quality |
| left ventricle myocardium | UBERON:0006566 | 90.22 | silver quality |
| cortical plate | UBERON:0005343 | 88.99 | gold quality |
| adrenal tissue | UBERON:0018303 | 88.91 | gold quality |
| myocardium | UBERON:0002349 | 88.09 | silver quality |
| ganglionic eminence | UBERON:0004023 | 87.92 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 86.65 | gold quality |
| endothelial cell | CL:0000115 | 86.60 | gold quality |
| ventricular zone | UBERON:0003053 | 86.17 | gold quality |
| heart right ventricle | UBERON:0002080 | 85.63 | gold quality |
| ileal mucosa | UBERON:0000331 | 85.51 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 85.45 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 85.20 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 84.72 | gold quality |
| pigmented layer of retina | UBERON:0001782 | 84.62 | gold quality |
| tibialis anterior | UBERON:0001385 | 84.22 | gold quality |
| parotid gland | UBERON:0001831 | 84.14 | gold quality |
| placenta | UBERON:0001987 | 83.59 | gold quality |
| cauda epididymis | UBERON:0004360 | 83.53 | gold quality |
| deltoid | UBERON:0001476 | 83.37 | silver quality |
| parietal pleura | UBERON:0002400 | 83.04 | gold quality |
| biceps brachii | UBERON:0001507 | 82.19 | gold quality |
| seminal vesicle | UBERON:0000998 | 82.12 | gold quality |
| islet of Langerhans | UBERON:0000006 | 81.99 | gold quality |
| bone marrow cell | CL:0002092 | 81.92 | gold quality |
| quadriceps femoris | UBERON:0001377 | 81.39 | silver quality |
| calcaneal tendon | UBERON:0003701 | 81.18 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 81.14 | gold quality |
| muscle tissue | UBERON:0002385 | 80.88 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 4.81 |
Regulation
Is transcription factor: yes
JASPAR motifs
| Motif | Name | Family |
|---|---|---|
| MA2586.1 | ZNF518B | Factors with multiple dispersed zinc fingers |
JASPAR matrix evidence (PMIDs): PMID:39605530
miRNA regulators (miRDB)
160 targeting ZNF518B, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-LET-7A-3P | 100.00 | 74.03 | 3932 |
| HSA-LET-7B-3P | 100.00 | 74.08 | 3913 |
| HSA-LET-7F-1-3P | 100.00 | 74.02 | 3928 |
| HSA-MIR-98-3P | 100.00 | 74.08 | 3907 |
| HSA-MIR-29A-3P | 100.00 | 73.11 | 1835 |
| HSA-MIR-29B-3P | 100.00 | 73.18 | 1833 |
| HSA-MIR-29C-3P | 100.00 | 73.15 | 1833 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-6856-5P | 100.00 | 65.47 | 1298 |
| HSA-MIR-4789-3P | 99.99 | 70.75 | 2484 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-511-3P | 99.99 | 68.85 | 1467 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-186-5P | 99.99 | 70.83 | 3707 |
| HSA-MIR-548P | 99.98 | 72.25 | 3784 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-302C-5P | 99.97 | 72.56 | 3642 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-1250-3P | 99.96 | 70.04 | 4038 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-548AB | 99.95 | 71.31 | 3488 |
| HSA-MIR-559 | 99.95 | 72.28 | 3609 |
| HSA-MIR-548A-5P | 99.94 | 71.27 | 3482 |
| HSA-MIR-548AD-5P | 99.94 | 71.23 | 3502 |
Literature-anchored findings (GeneRIF, showing 3)
- CLNK and ZNF518B SNPs may have potential as diagnostic and prognostic marker for Chinese gout patients. (PMID:25591661)
- SLC2A9 and ZNF518B polymorphisms correlate with gout-related metabolic indices in Chinese Tibetan populations (PMID:26345926)
- ZNF518B exhibits a pattern of isoform abundance dependent on KRAS G13D and G12D mutations. (PMID:27805251)
Cross-species orthologs
6 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Zfp518b | ENSMUSG00000046572 |
| rattus_norvegicus | Zfp518b | ENSRNOG00000028534 |
| drosophila_melanogaster | hb | FBGN0001180 |
| drosophila_melanogaster | CG12391 | FBGN0033581 |
| caenorhabditis_elegans | WBGENE00001824 | |
| caenorhabditis_elegans | WBGENE00012385 |
Paralogs (29): ZNF446 (ENSG00000083838), REST (ENSG00000084093), ZNF174 (ENSG00000103343), OVOL3 (ENSG00000105261), PLAGL1 (ENSG00000118495), ZSCAN18 (ENSG00000121413), ZNF576 (ENSG00000124444), OVOL2 (ENSG00000125850), PLAGL2 (ENSG00000126003), ZSCAN5A (ENSG00000131848), ZSCAN29 (ENSG00000140265), ZSCAN32 (ENSG00000140987), ZSCAN1 (ENSG00000152467), ZNF18 (ENSG00000154957), ZKSCAN2 (ENSG00000155592), ZNF496 (ENSG00000162714), ZNF202 (ENSG00000166261), ZNF641 (ENSG00000167528), ZNF444 (ENSG00000167685), SCAND1 (ENSG00000171222), ZNF274 (ENSG00000171606), ZNF131 (ENSG00000172262), OVOL1 (ENSG00000172818), ZNF518A (ENSG00000177853), PLAG1 (ENSG00000181690), ZSCAN5B (ENSG00000197213), ZNF770 (ENSG00000198146), PEG3 (ENSG00000198300), ZSCAN5C (ENSG00000204532)
Protein
Protein identifiers
Zinc finger protein 518B — Q9C0D4 (reviewed: Q9C0D4)
All UniProt accessions (2): Q9C0D4, D6RDM9
UniProt curated annotations — full annotation on UniProt →
Function. Through its association with the EHMT1-EHMT2/G9A and PRC2/EED-EZH2 histone methyltransferase complexes may function in gene silencing, regulating repressive post-translational methylation of histone tails at promoters of target genes.
Subcellular location. Nucleus.
Similarity. Belongs to the krueppel C2H2-type zinc-finger protein family.
RefSeq proteins (3): NP_001362745, NP_001362746, NP_444270* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR013087 | Znf_C2H2_type | Domain |
| IPR036236 | Znf_C2H2_sf | Homologous_superfamily |
UniProt features (23 total): cross-link 7, compositionally biased region 4, region of interest 4, zinc finger region 3, sequence variant 3, chain 1, sequence conflict 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9C0D4-F1 | 43.49 | 0.02 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (7): 482, 491, 558, 594, 809, 846, 860
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 107 (showing top):
AGTCTTA_MIR499, chr4p16, AGCATTA_MIR155, AAGCACA_MIR218, NUYTTEN_NIPP1_TARGETS_DN, TORCHIA_TARGETS_OF_EWSR1_FLI1_FUSION_DN, BYSTRYKH_HEMATOPOIESIS_STEM_CELL_QTL_TRANS, DURAND_STROMA_NS_UP, ZWANG_TRANSIENTLY_UP_BY_2ND_EGF_PULSE_ONLY, GCNP_SHH_UP_EARLY.V1_DN, MTOR_UP.V1_UP, GOMF_TRANSCRIPTION_REGULATOR_ACTIVITY, ZNF213_TARGET_GENES, ZNF618_TARGET_GENES, GSE10240_CTRL_VS_IL17_AND_IL22_STIM_PRIMARY_BRONCHIAL_EPITHELIAL_CELLS_DN
GO Biological Process (2): chromatin organization (GO:0006325), regulation of transcription by RNA polymerase II (GO:0006357)
GO Molecular Function (4): DNA-binding transcription factor activity, RNA polymerase II-specific (GO:0000981), DNA binding (GO:0003677), zinc ion binding (GO:0008270), metal ion binding (GO:0046872)
GO Cellular Component (1): nucleus (GO:0005634)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular component organization | 1 |
| regulation of DNA-templated transcription | 1 |
| transcription by RNA polymerase II | 1 |
| chromatin | 1 |
| RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1 |
| DNA-binding transcription factor activity | 1 |
| regulation of transcription by RNA polymerase II | 1 |
| nucleic acid binding | 1 |
| transition metal ion binding | 1 |
| cation binding | 1 |
| intracellular membrane-bounded organelle | 1 |
Protein interactions and networks
STRING
572 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ZNF518B | WDR1 | O75083 | 623 |
| ZNF518B | AMER3 | Q8N944 | 585 |
| ZNF518B | SLC2A9 | Q9NRM0 | 520 |
| ZNF518B | GNPNAT1 | Q96EK6 | 495 |
| ZNF518B | EPDR1 | Q9UM22 | 464 |
| ZNF518B | EZH2 | Q15910 | 422 |
| ZNF518B | CLNK | Q7Z7G1 | 419 |
| ZNF518B | KLF14 | Q8TD94 | 405 |
| ZNF518B | FHL2 | Q14192 | 385 |
| ZNF518B | SP6 | Q3SY56 | 381 |
| ZNF518B | TMEM54 | Q969K7 | 381 |
| ZNF518B | DEFB131A | P59861 | 368 |
| ZNF518B | WIZ | O95785 | 357 |
| ZNF518B | ZNF730 | Q6ZMV8 | 349 |
| ZNF518B | PHTF2 | Q8N3S3 | 346 |
IntAct
19 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CHCHD4 | ENSA | psi-mi:“MI:0914”(association) | 0.530 |
| CBX1 | ZNF292 | psi-mi:“MI:0914”(association) | 0.530 |
| IKZF5 | PEX14 | psi-mi:“MI:0914”(association) | 0.350 |
| VPS35 | ILVBL | psi-mi:“MI:0914”(association) | 0.350 |
| H2BC21 | SMCHD1 | psi-mi:“MI:0914”(association) | 0.350 |
| S100A2 | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.350 |
| CBX3 | ZNF324 | psi-mi:“MI:0914”(association) | 0.350 |
| CBX3 | MYL12B | psi-mi:“MI:0914”(association) | 0.350 |
| CBX5 | ZNF292 | psi-mi:“MI:0914”(association) | 0.350 |
| CTBP1 | SEC16A | psi-mi:“MI:2364”(proximity) | 0.270 |
| HOXA2 | GPX1 | psi-mi:“MI:2364”(proximity) | 0.270 |
| KLF15 | ZNF292 | psi-mi:“MI:2364”(proximity) | 0.270 |
| SOX7 | NFIB | psi-mi:“MI:2364”(proximity) | 0.270 |
| HOXB2 | KMT2D | psi-mi:“MI:2364”(proximity) | 0.270 |
| HNRNPC | SBNO1 | psi-mi:“MI:2364”(proximity) | 0.270 |
| QKI | SMCHD1 | psi-mi:“MI:2364”(proximity) | 0.270 |
| ZRANB2 | SBNO1 | psi-mi:“MI:2364”(proximity) | 0.270 |
BioGRID (23): ZNF518B (Affinity Capture-MS), ZNF518B (Affinity Capture-MS), ZNF518B (Affinity Capture-MS), ZNF518B (Affinity Capture-MS), ZNF518B (Proximity Label-MS), ZNF518B (Affinity Capture-MS), ZNF518B (Affinity Capture-MS), ZNF518B (Affinity Capture-MS), ZNF518B (Affinity Capture-MS), ZNF518B (Affinity Capture-MS), ZNF518B (Proximity Label-MS), ZNF518B (Proximity Label-MS), ZNF518B (Proximity Label-MS), ZNF518B (Proximity Label-MS), ZNF518B (Proximity Label-MS)
ESM2 similar proteins: A0A087WXM9, A1L2H3, A4D1E1, A6QNQ6, A8MVM7, D3Z987, E1BC15, E5FYH0, E5FYH1, F6ULY3, F7DF15, G3S077, G7H7V7, G7NY55, O13859, O60673, P38398, P51587, P97929, Q0VBV7, Q3TNU4, Q3V089, Q4QY64, Q56UN5, Q5DTT3, Q5VWN6, Q61493, Q6J6I8, Q6J6I9, Q6J6J0, Q6P0N0, Q6ZP01, Q7Z333, Q7Z570, Q80WQ8, Q864S8, Q864U1, Q86WS4, Q86XD8, Q8IXS0
Diamond homologs: B2RRE4, B2RRF6, Q2I689, Q499R0, Q6AHZ1, Q9C0D4, Q9UM63, B0XS89, B1WBU4, J9VE33, P54785, P80944, Q0VCJ6, Q29419, Q58NQ5, Q5SVQ8, Q5U2T6, Q65XX7, Q6DJT9, Q6P882, Q811F1, Q96BR9, Q9CWH1, Q9QYE0, Q9UPG8, A1L2U9, B1WAZ8, Q0IH98, Q01611, Q95LI3, A0A1V6NWD3, O77459, P28166, P39956, P60319, Q02027, Q03833, Q10938, Q14119, Q292R5
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
195 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 170 |
| Likely benign | 14 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
709 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 4:10454803:A:AC | donor_gain | 1.0000 |
| 4:10454804:C:CC | donor_gain | 1.0000 |
| 4:10454806:T:TA | donor_gain | 1.0000 |
| 4:10457312:CTTA:C | donor_loss | 1.0000 |
| 4:10457313:TTA:T | donor_loss | 1.0000 |
| 4:10457315:A:AC | donor_gain | 1.0000 |
| 4:10457315:AC:A | donor_gain | 1.0000 |
| 4:10457316:C:CC | donor_gain | 1.0000 |
| 4:10457316:CC:C | donor_gain | 1.0000 |
| 4:10457316:CCCGG:C | donor_gain | 1.0000 |
| 4:10446540:C:CC | acceptor_gain | 0.9900 |
| 4:10454803:ACTT:A | donor_gain | 0.9900 |
| 4:10454804:CTTC:C | donor_gain | 0.9900 |
| 4:10457315:ACC:A | donor_gain | 0.9900 |
| 4:10457316:CCC:C | donor_gain | 0.9900 |
| 4:10457316:CCCG:C | donor_gain | 0.9900 |
| 4:10446456:A:AC | donor_gain | 0.9800 |
| 4:10454807:C:A | donor_gain | 0.9800 |
| 4:10454810:G:A | donor_gain | 0.9800 |
| 4:10446457:A:C | donor_gain | 0.9700 |
| 4:10446538:CA:C | acceptor_gain | 0.9700 |
| 4:10450860:C:CT | acceptor_gain | 0.9700 |
| 4:10456823:T:TA | donor_gain | 0.9600 |
| 4:10454804:CTT:C | donor_gain | 0.9500 |
| 4:10446440:T:TA | donor_gain | 0.9400 |
| 4:10454868:T:TA | donor_gain | 0.9400 |
| 4:10454635:C:A | donor_gain | 0.9300 |
| 4:10456612:C:A | donor_gain | 0.9300 |
| 4:10452854:T:TA | donor_gain | 0.9200 |
| 4:10454816:AG:A | donor_gain | 0.9100 |
AlphaMissense
7092 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 4:10443165:C:T | G1055D | 1.000 |
| 4:10443176:C:A | W1051C | 1.000 |
| 4:10443176:C:G | W1051C | 1.000 |
| 4:10443178:A:G | W1051R | 1.000 |
| 4:10443178:A:T | W1051R | 1.000 |
| 4:10443217:A:G | C1038R | 1.000 |
| 4:10443492:A:G | L946S | 1.000 |
| 4:10443501:A:T | V943D | 1.000 |
| 4:10445837:A:C | C164W | 1.000 |
| 4:10445839:A:G | C164R | 1.000 |
| 4:10445903:G:C | F142L | 1.000 |
| 4:10445903:G:T | F142L | 1.000 |
| 4:10445905:A:G | F142L | 1.000 |
| 4:10445911:A:G | C140R | 1.000 |
| 4:10445918:A:C | C137W | 1.000 |
| 4:10445920:A:G | C137R | 1.000 |
| 4:10443153:A:G | L1059S | 0.999 |
| 4:10443155:A:C | H1058Q | 0.999 |
| 4:10443155:A:T | H1058Q | 0.999 |
| 4:10443157:G:C | H1058D | 0.999 |
| 4:10443159:C:G | R1057P | 0.999 |
| 4:10443177:C:G | W1051S | 0.999 |
| 4:10443206:A:C | C1041W | 0.999 |
| 4:10443207:C:T | C1041Y | 0.999 |
| 4:10443208:A:G | C1041R | 0.999 |
| 4:10443209:A:C | F1040L | 0.999 |
| 4:10443209:A:T | F1040L | 0.999 |
| 4:10443210:A:G | F1040S | 0.999 |
| 4:10443211:A:G | F1040L | 0.999 |
| 4:10443214:A:G | W1039R | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000056824 (4:10442822 A>C,G), RS1000076579 (4:10452221 C>G,T), RS1000151484 (4:10443468 G>A), RS1000176881 (4:10460139 T>A,C,G), RS1000182371 (4:10446201 A>T), RS1000229108 (4:10460275 A>G), RS1000286419 (4:10440645 T>C), RS1000332213 (4:10451337 G>A), RS1000503843 (4:10443114 T>C,G), RS1000515413 (4:10456292 C>A), RS1000520786 (4:10458982 G>T), RS1000574592 (4:10459257 T>C), RS1000680758 (4:10453365 G>C), RS10007352 (4:10446055 C>T), RS1000739733 (4:10461366 G>C)
Disease associations
OMIM: gene MIM:617734 | disease phenotypes:
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| schizophrenia | No Known Disease Relationship | Unknown |
Mondo (1): schizophrenia (MONDO:0005090)
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
4 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST004574_6 | Skin aging (microtopography measurement) | 7.000000e-06 |
| GCST008971_36 | Urate levels | 0.000000e+00 |
| GCST008971_37 | Urate levels | 9.000000e-59 |
| GCST010512_3 | Serum uric acid levels | 3.000000e-15 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004531 | urate measurement |
| EFO:0004761 | uric acid measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
28 total (human), top 28 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | decreases expression, affects expression, decreases methylation, increases expression, affects cotreatment | 7 |
| trichostatin A | affects cotreatment, decreases expression, increases expression | 3 |
| sodium arsenite | affects methylation, decreases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, decreases expression | 2 |
| Tobacco Smoke Pollution | decreases expression, increases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| GSK-J4 | decreases expression | 1 |
| TAK-243 | increases sumoylation | 1 |
| methylmercuric chloride | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| pirinixic acid | increases expression, affects binding, increases activity | 1 |
| potassium chromate(VI) | increases expression | 1 |
| nickel sulfate | decreases expression | 1 |
| avobenzone | decreases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 1 |
| dorsomorphin | affects cotreatment, decreases expression | 1 |
| jinfukang | decreases expression | 1 |
| Temozolomide | increases expression | 1 |
| Benzo(a)pyrene | affects methylation, decreases methylation | 1 |
| Doxorubicin | decreases expression | 1 |
| Folic Acid | decreases expression | 1 |
| Formaldehyde | decreases expression | 1 |
| Ketoconazole | increases expression | 1 |
| Dihydrotestosterone | increases expression | 1 |
| Vanadates | decreases expression | 1 |
| Antirheumatic Agents | increases expression | 1 |
| Lactic Acid | decreases expression | 1 |
| Magnetite Nanoparticles | increases methylation | 1 |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00000374 | PHASE4 | COMPLETED | Treatment for First-Episode Schizophrenia |
| NCT00001656 | PHASE4 | COMPLETED | Comparison of Clozapine vs Olanzapine in Childhood-Onset Psychotic Disorders |
| NCT00007774 | PHASE4 | COMPLETED | To Determine if Olanzapine is More Cost Effective Than Haloperidol for the Treatment of Schizophrenia |
| NCT00014001 | PHASE4 | COMPLETED | CATIE- Schizophrenia Trial |
| NCT00018668 | PHASE4 | COMPLETED | Antipsychotic Response in Schizophrenia |
| NCT00034801 | PHASE4 | COMPLETED | Olanzapine Versus Active Comparator in the Treatment of Depression in Patients With Schizophrenia |
| NCT00034905 | PHASE4 | COMPLETED | A Comparison of Seroquel vs. Risperidone in Schizophrenia |
| NCT00036088 | PHASE4 | COMPLETED | Olanzapine Versus An Active Comparator in the Treatment of Schizophrenia |
| NCT00044187 | PHASE4 | COMPLETED | The Assessment of a Weight-Gain Agent for the Treatment of Olanzapine-Associated Anti-Obesity Agent in Patients With Schizophrenia, Schizophreniform Disorder, Schizoaffective Disorder, and Bipolar I Disorder |
| NCT00044655 | PHASE4 | COMPLETED | Switching Medication to Treat Schizophrenia |
| NCT00048828 | PHASE4 | COMPLETED | Treating Drug-Resistant Childhood Schizophrenia |
| NCT00053703 | PHASE4 | COMPLETED | Treatment of Early Onset Schizophrenia Spectrum Disorders (TEOSS) |
| NCT00056498 | PHASE4 | COMPLETED | Risperidone Treatment in Schizophrenia Patients Who Are Currently Taking Clozapine |
| NCT00061802 | PHASE4 | COMPLETED | Efficacy and Safety of Two Atypical Antipsychotics vs. Placebo in Patients With an Acute Exacerbation of Either Schizophrenia or Schizoaffective Disorder |
| NCT00080327 | PHASE4 | COMPLETED | Study of Three Doses of Aripiprazole in Patients With Acute Schizophrenia |
| NCT00088049 | PHASE4 | COMPLETED | Study of Olanzapine vs. Aripiprazole in the Treatment of Schizophrenia |
| NCT00090012 | PHASE4 | COMPLETED | Comparison of Continuing Olanzapine to Switching to Quetiapine in Overweight or Obese Patients With Schizophrenia and Schizoaffective Disorder |
| NCT00100776 | PHASE4 | COMPLETED | Efficacy of High Dose Olanzapine for the Treatment of Schizophrenia and Schizoaffective Disorder |
| NCT00103571 | PHASE4 | COMPLETED | Olanzapine Versus Aripiprazole in the Treatment of Acutely Ill Patients With Schizophrenia |
| NCT00108368 | PHASE4 | COMPLETED | The Effects of Risperidone and Olanzapine on Thinking |
| NCT00114595 | PHASE4 | COMPLETED | Ethyl-Eicosapentaenoic Acid and Tardive Dyskinesia |
| NCT00130923 | PHASE4 | COMPLETED | Risperidone Long-acting Versus Oral Risperidone in Patients With Schizophrenia and Alcohol Use Disorder |
| NCT00137020 | PHASE4 | COMPLETED | Clinical Effect Of Cross Titration Of Antipsychotics With Ziprasidone In Schizophrenia Or Schizoaffective Disorder |
| NCT00140166 | PHASE4 | COMPLETED | Treatment of Acute Schizophrenia With Vitamin Therapy |
| NCT00145847 | PHASE4 | COMPLETED | Naltrexone Treatment of Alcohol Abuse in Schizophrenia |
| NCT00148564 | PHASE4 | COMPLETED | Energy Homeostasis Under Treatment With Atypical Antipsychotics |
| NCT00156715 | PHASE4 | COMPLETED | Efficacy of Quetiapine in the Treatment of Patients With Schizophrenia and a Comorbid Substance Use Disorder |
| NCT00158223 | PHASE4 | COMPLETED | Effectiveness of Pimozide in Augmenting the Effects of Clozapine in the Treatment of Schizophrenia |
| NCT00159081 | PHASE4 | COMPLETED | One Year Drug Treatment in First-Episode Schizophrenia |
| NCT00159120 | PHASE4 | COMPLETED | Maintenance Treatment vs. Stepwise Drug Discontinuation in First-Episode Schizophrenia |
| NCT00159133 | PHASE4 | COMPLETED | Prodrome-Based Early Intervention With Antipsychotics vs. Benzodiazepines in First-Episode Schizophrenia |
| NCT00159757 | PHASE4 | TERMINATED | 12 Week Open, Non-Comparative Switch Study Of Oral Ziprazidone In Previously Treated Schizophrenic Patients |
| NCT00167817 | PHASE4 | COMPLETED | Effect of Switch to Aripiprazole on Health and Smoking Parameters in Patients With Schizophrenia: A Pilot Study |
| NCT00169026 | PHASE4 | TERMINATED | Alcoholism and Schizophrenia: Effects of Clozapine |
| NCT00169039 | PHASE4 | TERMINATED | Clozapine Versus Chlorpromazine for Treatment-Unresponsive Schizophrenia |
| NCT00169065 | PHASE4 | COMPLETED | Effectiveness of Clozapine Versus Olanzapine for Treatment-resistant Schizophrenia |
| NCT00169091 | PHASE4 | TERMINATED | Clozapine Versus Haloperidol for Treating the First Episode of Schizophrenia |
| NCT00176423 | PHASE4 | COMPLETED | Efficacy Study of Galantamine for Cognitive Impairments in Schizophrenia |
| NCT00176436 | PHASE4 | COMPLETED | Atomoxetine for Treatment of Weight Gain in Olanzapine or Clozapine Patients |
| NCT00177008 | PHASE4 | COMPLETED | Aripiprazole for the Treatment of Schizophrenia With Co-Morbid Social Anxiety |
Related Atlas pages
- Associated diseases: schizophrenia