ZNF566-AS1

Summary

ZNF566-AS1 (ZNF566 antisense RNA 1, HGNC:55301) is a long non-coding RNA gene on chromosome 19q13.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55301
Approved symbol	ZNF566-AS1
Name	ZNF566 antisense RNA 1
Location	19q13.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267309
Ensembl biotype	lncRNA
Entrez	728752
RNAcentral	URS000075C3E9 — lncRNA, 1414 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000592087

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000592087 — 1 exons

Exon	Start	End
ENSE00004110645	36489621	36491040

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 89.59.

FANTOM5 (CAGE): breadth broad, TPM avg 1.4386 / max 16.4304, expressed in 878 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
175516	1.4386	878

Top tissues by expression

135 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
thymus	UBERON:0002370	89.59	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.01	silver quality
cerebellar vermis	UBERON:0004720	76.91	gold quality
sural nerve	UBERON:0015488	73.67	gold quality
quadriceps femoris	UBERON:0001377	69.42	gold quality
bone marrow cell	CL:0002092	69.01	silver quality
stromal cell of endometrium	CL:0002255	68.43	gold quality
primary visual cortex	UBERON:0002436	68.08	gold quality
right adrenal gland cortex	UBERON:0035827	67.51	gold quality
cortical plate	UBERON:0005343	67.47	gold quality
superior frontal gyrus	UBERON:0002661	67.24	gold quality
right adrenal gland	UBERON:0001233	67.18	gold quality
right frontal lobe	UBERON:0002810	67.05	gold quality
nucleus accumbens	UBERON:0001882	66.80	gold quality
frontal cortex	UBERON:0001870	66.45	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	65.97	gold quality
granulocyte	CL:0000094	65.91	gold quality
cerebral cortex	UBERON:0000956	65.87	gold quality
anterior cingulate cortex	UBERON:0009835	65.83	gold quality
islet of Langerhans	UBERON:0000006	65.70	gold quality
prefrontal cortex	UBERON:0000451	65.69	gold quality
caudate nucleus	UBERON:0001873	65.68	gold quality
spinal cord	UBERON:0002240	65.62	gold quality
putamen	UBERON:0001874	65.58	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	65.58	gold quality
left adrenal gland	UBERON:0001234	65.47	gold quality
substantia nigra	UBERON:0002038	65.07	gold quality
adrenal gland	UBERON:0002369	65.06	gold quality
Brodmann (1909) area 9	UBERON:0013540	64.74	gold quality
adult mammalian kidney	UBERON:0000082	64.67	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.