ZNF652-AS1

Summary

ZNF652-AS1 (ZNF652 antisense RNA 1, HGNC:55582) is a long non-coding RNA gene on chromosome 17q21.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55582
Approved symbol	ZNF652-AS1
Name	ZNF652 antisense RNA 1
Location	17q21.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248714
Ensembl biotype	lncRNA
Entrez	102724596
RNAcentral	URS000075C492 — lncRNA, 624 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 14 — 14 lncRNA

ENST00000502823, ENST00000507337, ENST00000510360, ENST00000511322, ENST00000576461, ENST00000769084, ENST00000769085, ENST00000769086, ENST00000769087, ENST00000769088, ENST00000769381, ENST00000769382, ENST00000769383, ENST00000769384

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502823 — 3 exons

Exon	Start	End
ENSE00002042979	49364279	49364349
ENSE00002084642	49361150	49361221
ENSE00003874071	49365699	49367596

Expression profiles

Bgee: expression breadth ubiquitous, 129 present calls, max score 80.05.

Top tissues by expression

129 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	80.05	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	74.99	gold quality
colonic epithelium	UBERON:0000397	73.03	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	72.73	gold quality
granulocyte	CL:0000094	72.12	gold quality
substantia nigra	UBERON:0002038	69.68	gold quality
Ammon’s horn	UBERON:0001954	69.26	gold quality
cortical plate	UBERON:0005343	68.20	gold quality
ventricular zone	UBERON:0003053	67.70	gold quality
corpus callosum	UBERON:0002336	67.52	gold quality
stromal cell of endometrium	CL:0002255	67.09	gold quality
blood	UBERON:0000178	66.65	gold quality
leukocyte	CL:0000738	66.43	gold quality
lymph node	UBERON:0000029	66.39	gold quality
monocyte	CL:0000576	65.81	gold quality
nucleus accumbens	UBERON:0001882	65.35	gold quality
Brodmann (1909) area 9	UBERON:0013540	64.85	gold quality
putamen	UBERON:0001874	64.42	gold quality
cerebral cortex	UBERON:0000956	63.95	gold quality
spleen	UBERON:0002106	63.86	gold quality
caudate nucleus	UBERON:0001873	63.76	gold quality
anterior cingulate cortex	UBERON:0009835	63.56	gold quality
prefrontal cortex	UBERON:0000451	63.10	gold quality
frontal cortex	UBERON:0001870	62.89	gold quality
right frontal lobe	UBERON:0002810	62.86	gold quality
amygdala	UBERON:0001876	62.83	gold quality
temporal lobe	UBERON:0001871	62.76	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	62.76	gold quality
hypothalamus	UBERON:0001898	62.50	gold quality
brain	UBERON:0000955	62.48	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.09

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.