ZNF703
gene geneOn this page
Also known as FLJ14299ZNF503LNLZ1Zpo1ZEPPO1
Summary
ZNF703 (zinc finger protein 703, HGNC:25883) is a protein-coding gene on chromosome 8p11.23, encoding Zinc finger protein 703 (Q9H7S9). Transcriptional corepressor which does not bind directly to DNA and may regulate transcription through recruitment of histone deacetylases to gene promoters.
Predicted to enable DNA-binding transcription factor binding activity and zinc ion binding activity. Involved in several processes, including cellular response to estradiol stimulus; positive regulation of mammary gland epithelial cell proliferation; and regulation of transforming growth factor beta receptor signaling pathway. Located in cytoplasm and nuclear matrix. Part of protein-containing complex.
Source: NCBI Gene 80139 — RefSeq curated summary.
At a glance
- GWAS associations: 8
- Clinical variants (ClinVar): 96 total
- MANE Select transcript:
NM_025069
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:25883 |
| Approved symbol | ZNF703 |
| Name | zinc finger protein 703 |
| Location | 8p11.23 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FLJ14299, ZNF503L, NLZ1, Zpo1, ZEPPO1 |
| Ensembl gene | ENSG00000183779 |
| Ensembl biotype | protein_coding |
| OMIM | 617045 |
| Entrez | 80139 |
Gene structure
Transcript identifiers
Ensembl transcripts: 1 — 1 protein_coding
ENST00000331569
RefSeq mRNA: 1 — MANE Select: NM_025069
NM_025069
CCDS: CCDS6094
Canonical transcript exons
ENST00000331569 — 2 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001299932 | 37697145 | 37700019 |
| ENSE00002102574 | 37695782 | 37696222 |
Expression profiles
Bgee: expression breadth ubiquitous, 240 present calls, max score 96.62.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 43.7013 / max 713.3296, expressed in 1682 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 88422 | 34.9251 | 1637 |
| 88421 | 8.7762 | 1518 |
Top tissues by expression
250 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| upper arm skin | UBERON:0004263 | 96.62 | gold quality |
| nipple | UBERON:0002030 | 95.82 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 95.53 | gold quality |
| gastrocnemius | UBERON:0001388 | 95.23 | gold quality |
| body of tongue | UBERON:0011876 | 94.89 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 94.33 | gold quality |
| muscle of leg | UBERON:0001383 | 94.00 | gold quality |
| oviduct epithelium | UBERON:0004804 | 93.75 | gold quality |
| popliteal artery | UBERON:0002250 | 93.26 | gold quality |
| tibial artery | UBERON:0007610 | 93.26 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 93.03 | gold quality |
| pylorus | UBERON:0001166 | 92.45 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 92.45 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 92.42 | gold quality |
| skin of abdomen | UBERON:0001416 | 92.38 | gold quality |
| tongue | UBERON:0001723 | 92.24 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 92.24 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 92.20 | gold quality |
| aorta | UBERON:0000947 | 92.07 | gold quality |
| urethra | UBERON:0000057 | 92.01 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 91.85 | gold quality |
| trachea | UBERON:0003126 | 91.47 | gold quality |
| endocervix | UBERON:0000458 | 91.45 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 91.35 | gold quality |
| quadriceps femoris | UBERON:0001377 | 91.32 | gold quality |
| zone of skin | UBERON:0000014 | 91.18 | gold quality |
| biceps brachii | UBERON:0001507 | 91.15 | gold quality |
| vastus lateralis | UBERON:0001379 | 91.04 | gold quality |
| skin of leg | UBERON:0001511 | 90.91 | gold quality |
| transverse colon | UBERON:0001157 | 90.70 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-3929 | yes | 203.13 |
| E-ANND-3 | yes | 6.12 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
115 targeting ZNF703, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-6127 | 100.00 | 66.76 | 2188 |
| HSA-MIR-6129 | 100.00 | 66.46 | 2080 |
| HSA-MIR-4510 | 100.00 | 66.60 | 2050 |
| HSA-MIR-6130 | 100.00 | 66.69 | 2012 |
| HSA-MIR-6133 | 100.00 | 66.48 | 2064 |
| HSA-MIR-126-5P | 100.00 | 72.71 | 3180 |
| HSA-MIR-656-3P | 100.00 | 72.15 | 2788 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-1252-5P | 100.00 | 69.80 | 2774 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-499A-5P | 99.98 | 70.79 | 1323 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-507 | 99.97 | 70.11 | 1915 |
| HSA-MIR-6825-5P | 99.96 | 69.81 | 3431 |
| HSA-MIR-6780B-5P | 99.96 | 69.60 | 2562 |
| HSA-MIR-4725-3P | 99.96 | 69.53 | 2520 |
| HSA-MIR-2110 | 99.96 | 66.68 | 1930 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-LET-7C-3P | 99.95 | 73.42 | 2862 |
| HSA-MIR-185-3P | 99.95 | 67.01 | 1743 |
| HSA-MIR-651-3P | 99.94 | 73.48 | 5177 |
| HSA-MIR-3143 | 99.93 | 71.96 | 3104 |
| HSA-MIR-6768-5P | 99.92 | 67.36 | 1942 |
| HSA-MIR-450B-5P | 99.92 | 71.48 | 3175 |
| HSA-MIR-7-1-3P | 99.91 | 71.53 | 4384 |
| HSA-MIR-7-2-3P | 99.91 | 71.40 | 4394 |
| HSA-MIR-3529-3P | 99.90 | 73.55 | 3045 |
Literature-anchored findings (GeneRIF, showing 20)
- Data show that FGFR1 and DDHD2 at 8p12 cooperated functionally with MYC, whereas CCND1 and ZNF703 cooperated with a dominant negative form of TP53. (PMID:19330026)
- ZNF703 expression results in the activation of stem cell-related gene expression leading to an increase in cancer stem cells. (PMID:21328542)
- These data strongly point to ZNF703 as a novel oncogene in Luminal B breast cancer. (PMID:21337521)
- The conserved domains are essential for proper subcellular localization and transcriptional repression of the NLZ1/ZNF703 protein. (PMID:22886885)
- Data indicate that ZNF703 overexpression in MCF-7 breast cancer cells activated the Akt/mTOR signaling pathway, downregulated ERalpha, and reduced the antitumor effect of tamoxifen. (PMID:23991038)
- High expression of ZNF703 independent of amplification indicates worse prognosis in patients with luminal B breast cancer. (PMID:24156016)
- The results showed that ZNF703 acts as a gastric cancer oncogene (PMID:24481460)
- Results show that ZNF703 expression is upregulated in colorectal cancer tissues (CRC) and is significantly correlated with tumor size, pathological grading, and serosal and lymph node metastasis suggesting that it may act as an oncogene in CRC. (PMID:25017610)
- ZNF703 was a target of SPRY4-IT1. (PMID:25742952)
- Results show that ZNF703 overexpression is associated with adverse prognosis in head and neck squamous cell carcinomas, which might be a novel biomarker for this type of neoplasm. (PMID:26063961)
- In vitro function assays demonstrated that SPRY4-IT1 cause promotion of cell viability in ESCC cells. Authors further verified that SPRY4-IT1 could also activate the expression of ZNF703 in ESCC cells, which might contribute to the role of SPRY4-IT1 in ESCC cells. (PMID:27453415)
- Results show that ZNF703 is up-regulated in 63.4% of non-small cell lung cancer (NSCLC) tumor samples and it may contribute to tumor development by activating the Akt/mTOR pathway in NSCLC. (PMID:27650486)
- ZNF703 can potently facilitate tumor growth and metastasis in many respects throughout the progression of CCA, which may act as an oncogene in CCA and can be considered as a novel potential therapeutic target. (PMID:27764785)
- ZNF703 is Overexpressed in Papillary Thyroid Carcinoma Tissues and Mediates K1 Cell Proliferation. (PMID:30361900)
- ZNF703 may have potential as a therapeutic target. (PMID:30362321)
- ZNF703 is an important player in head and neck cancer. (PMID:31574205)
- Zinc finger protein 703 induces EMT and sorafenib resistance in hepatocellular carcinoma by transactivating CLDN4 expression. (PMID:32269215)
- Transcription factor ZNF703 activates linc-UBC1 to stimulate the progression of glioma. (PMID:32271436)
- ZNF703 promotes tumor progression in ovarian cancer by interacting with HE4 and epigenetically regulating PEA15. (PMID:33246486)
- ZNF703 gene copy number and protein expression in breast cancer; associations with proliferation, prognosis and luminal subtypes. (PMID:33389351)
Cross-species orthologs
6 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | znf703 | ENSDARG00000035563 |
| mus_musculus | Zfp703 | ENSMUSG00000085795 |
| rattus_norvegicus | Zfp703 | ENSRNOG00000014199 |
| drosophila_melanogaster | elB | FBGN0004858 |
| drosophila_melanogaster | noc | FBGN0005771 |
| caenorhabditis_elegans | WBGENE00006580 |
Paralogs (1): ZNF503 (ENSG00000165655)
Protein
Protein identifiers
Zinc finger protein 703 — Q9H7S9 (reviewed: Q9H7S9)
Alternative names: Zinc finger elbow-related proline domain protein 1
All UniProt accessions (1): Q9H7S9
UniProt curated annotations — full annotation on UniProt →
Function. Transcriptional corepressor which does not bind directly to DNA and may regulate transcription through recruitment of histone deacetylases to gene promoters. Regulates cell adhesion, migration and proliferation. May be required for segmental gene expression during hindbrain development.
Subunit / interactions. Interacts with TLE4; increases transcriptional repression. Interacts with DCAF7 and PHB2. May interact with HSPD1.
Subcellular location. Nucleus. Cytoplasm.
Tissue specificity. Expressed in mammary epithelium.
Disease relevance. Luminal B breast cancers are the clinically more aggressive estrogen receptor-positive tumors. Amplification of a distal 8p12 locus occurs in around one third of the cases and ZNF703 is the single gene within the minimal amplicon. Amplification of the gene correlates with its protein expression in tumor cells. ZNF703 is a classical breast cancer oncogene since it is able to transform non-malignant cells and increase cellular proliferation.
Induction. Up-regulated by 17-beta-estradiol.
Similarity. Belongs to the Elbow/Noc family.
RefSeq proteins (1): NP_079345* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR013087 | Znf_C2H2_type | Domain |
| IPR022129 | Tscrpt_rep_NocA-like | Family |
| IPR051520 | Elbow/Noc_ZnFinger | Family |
Pfam: PF12402
UniProt features (17 total): compositionally biased region 8, modified residue 3, region of interest 3, initiator methionine 1, chain 1, zinc finger region 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9H7S9-F1 | 51.00 | 0.03 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (3): 2, 252, 580
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-212436 | Generic Transcription Pathway |
MSigDB gene sets: 249 (showing top):
GOBP_REGULATION_OF_CELLULAR_RESPONSE_TO_GROWTH_FACTOR_STIMULUS, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_REGULATION_OF_MAMMARY_GLAND_EPITHELIAL_CELL_PROLIFERATION, GOBP_RESPONSE_TO_ESTRADIOL, GOBP_POSITIVE_REGULATION_OF_EPITHELIAL_TO_MESENCHYMAL_TRANSITION, GOBP_CELLULAR_RESPONSE_TO_LIPID, SP3_Q3, GOBP_MAMMARY_GLAND_EPITHELIUM_DEVELOPMENT, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_UP, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_UP, GOBP_NEGATIVE_REGULATION_OF_CELL_CELL_ADHESION, GOBP_MAMMARY_GLAND_EPITHELIAL_CELL_DIFFERENTIATION, CERVERA_SDHB_TARGETS_1_DN, GOBP_REGULATION_OF_WNT_SIGNALING_PATHWAY, GOBP_CELLULAR_RESPONSE_TO_OXYGEN_CONTAINING_COMPOUND
GO Biological Process (13): regulation of DNA-templated transcription (GO:0006355), positive regulation of cell population proliferation (GO:0008284), positive regulation of epithelial to mesenchymal transition (GO:0010718), regulation of transforming growth factor beta receptor signaling pathway (GO:0017015), positive regulation of cell migration (GO:0030335), positive regulation of mammary gland epithelial cell proliferation (GO:0033601), negative regulation of homotypic cell-cell adhesion (GO:0034111), adherens junction assembly (GO:0034333), negative regulation of DNA-templated transcription (GO:0045892), regulation of cell cycle (GO:0051726), mammary gland epithelial cell differentiation (GO:0060644), regulation of canonical Wnt signaling pathway (GO:0060828), cellular response to estradiol stimulus (GO:0071392)
GO Molecular Function (4): zinc ion binding (GO:0008270), DNA-binding transcription factor binding (GO:0140297), protein binding (GO:0005515), metal ion binding (GO:0046872)
GO Cellular Component (5): nucleus (GO:0005634), cytoplasm (GO:0005737), mitochondrion (GO:0005739), nuclear matrix (GO:0016363), protein-containing complex (GO:0032991)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| RNA Polymerase II Transcription | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| DNA-templated transcription | 2 |
| positive regulation of multicellular organismal process | 2 |
| intracellular membrane-bounded organelle | 2 |
| cellular anatomical structure | 2 |
| regulation of gene expression | 1 |
| regulation of RNA biosynthetic process | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| positive regulation of cellular process | 1 |
| epithelial to mesenchymal transition | 1 |
| regulation of epithelial to mesenchymal transition | 1 |
| positive regulation of cell differentiation | 1 |
| transforming growth factor beta receptor signaling pathway | 1 |
| regulation of transmembrane receptor protein serine/threonine kinase signaling pathway | 1 |
| regulation of cellular response to transforming growth factor beta stimulus | 1 |
| cell migration | 1 |
| regulation of cell migration | 1 |
| positive regulation of cell motility | 1 |
| mammary gland epithelial cell proliferation | 1 |
| regulation of mammary gland epithelial cell proliferation | 1 |
| positive regulation of epithelial cell proliferation | 1 |
| positive regulation of developmental process | 1 |
| negative regulation of cell-cell adhesion | 1 |
| homotypic cell-cell adhesion | 1 |
| regulation of homotypic cell-cell adhesion | 1 |
| cell-cell junction assembly | 1 |
| adherens junction organization | 1 |
| regulation of DNA-templated transcription | 1 |
| negative regulation of RNA biosynthetic process | 1 |
| cell cycle | 1 |
| regulation of cellular process | 1 |
| epithelial cell differentiation | 1 |
| mammary gland epithelium development | 1 |
| regulation of Wnt signaling pathway | 1 |
| canonical Wnt signaling pathway | 1 |
| response to estradiol | 1 |
| cellular response to lipid | 1 |
| cellular response to oxygen-containing compound | 1 |
| transition metal ion binding | 1 |
| transcription factor binding | 1 |
Protein interactions and networks
STRING
784 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ZNF703 | FGFR1 | P11362 | 684 |
| ZNF703 | ERLIN2 | O94905 | 613 |
| ZNF703 | PLPBP | O94903 | 605 |
| ZNF703 | PLPP5 | Q8NEB5 | 573 |
| ZNF703 | RAB11FIP1 | Q6WKZ4 | 489 |
| ZNF703 | ZNF217 | O75362 | 471 |
| ZNF703 | DCAF7 | P61962 | 449 |
| ZNF703 | ADGRA2 | Q96PE1 | 447 |
| ZNF703 | ERBB2 | P04626 | 433 |
| ZNF703 | LSM1 | O15116 | 431 |
| ZNF703 | DDHD2 | O94830 | 431 |
| ZNF703 | TEP1 | Q99973 | 422 |
| ZNF703 | NSD3 | Q9BZ95 | 419 |
| ZNF703 | CCND1 | P24385 | 401 |
| ZNF703 | PIK3CA | P42336 | 398 |
IntAct
104 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| DCAF7 | ZNF703 | psi-mi:“MI:0403”(colocalization) | 0.870 |
| HSPA8 | GAK | psi-mi:“MI:0914”(association) | 0.760 |
| DCAF7 | DIAPH1 | psi-mi:“MI:0914”(association) | 0.730 |
| TEPSIN | AP4M1 | psi-mi:“MI:0914”(association) | 0.700 |
| FAM136A | RBFOX3 | psi-mi:“MI:0914”(association) | 0.640 |
| HOXA1 | ZNF703 | psi-mi:“MI:0915”(physical association) | 0.590 |
| MFHAS1 | PGRMC2 | psi-mi:“MI:0914”(association) | 0.590 |
| DCAF7 | PFDN6 | psi-mi:“MI:0914”(association) | 0.570 |
| HAO2 | EIF4G3 | psi-mi:“MI:0914”(association) | 0.530 |
| TCEAL1 | CHEK1 | psi-mi:“MI:0914”(association) | 0.530 |
| SBSPON | ZNF609 | psi-mi:“MI:0914”(association) | 0.530 |
| TEKT3 | CLUH | psi-mi:“MI:0914”(association) | 0.530 |
| BAG4 | DNAJC13 | psi-mi:“MI:0914”(association) | 0.530 |
| VSX2 | USP12 | psi-mi:“MI:0914”(association) | 0.530 |
| MSX2 | ANKRD40 | psi-mi:“MI:0914”(association) | 0.530 |
| BAG2 | HGS | psi-mi:“MI:0914”(association) | 0.530 |
| TIGD5 | P4HA2 | psi-mi:“MI:0914”(association) | 0.530 |
| ELSPBP1 | PFDN1 | psi-mi:“MI:0914”(association) | 0.530 |
BioGRID (140): ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS), ZNF703 (Affinity Capture-MS)
ESM2 similar proteins: A2VE44, A7YY54, O00268, O00287, O35274, O35779, O75398, O77562, O77638, O88450, O95644, P12755, P15066, P17535, P17544, P22670, P48377, P52909, P78424, Q07916, Q13469, Q14863, Q3UR85, Q5R9C9, Q60591, Q69Z61, Q6R891, Q6T4P5, Q86YP4, Q8BJI4, Q8CHY6, Q8CIE2, Q8NF64, Q8R0S1, Q8R3B7, Q8TEK3, Q8VCG9, Q8VHR5, Q8WXI9, Q96N64
Diamond homologs: P0CL69, Q05AQ8, Q24423, Q2VPM4, Q566L4, Q6UFS5, Q7TMA2, Q7ZWN6, Q90ZE2, Q96F45, Q9H7S9, Q9VJS8
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 122 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| inner ear morphogenesis | 5 | 14.3× | 3e-03 |
| cell fate commitment | 5 | 14.1× | 3e-03 |
| anatomical structure morphogenesis | 8 | 10.6× | 2e-04 |
| protein folding | 10 | 9.8× | 6e-05 |
Disease & clinical
Cancer significance
Clinical variants and AI predictions
ClinVar
96 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 91 |
| Likely benign | 0 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
188 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 8:37696177:G:GT | donor_gain | 0.9900 |
| 8:37696219:TGAG:T | donor_loss | 0.9900 |
| 8:37696221:AGG:A | donor_loss | 0.9900 |
| 8:37696223:G:T | donor_loss | 0.9900 |
| 8:37696224:T:G | donor_loss | 0.9900 |
| 8:37697133:T:TA | acceptor_gain | 0.9900 |
| 8:37697140:CACA:C | acceptor_loss | 0.9900 |
| 8:37697141:ACAG:A | acceptor_loss | 0.9900 |
| 8:37697142:CA:C | acceptor_loss | 0.9900 |
| 8:37697143:A:AG | acceptor_gain | 0.9900 |
| 8:37697143:AGCT:A | acceptor_gain | 0.9900 |
| 8:37697143:AGCTG:A | acceptor_gain | 0.9900 |
| 8:37697144:G:GT | acceptor_gain | 0.9900 |
| 8:37697144:GC:G | acceptor_gain | 0.9900 |
| 8:37697144:GCT:G | acceptor_gain | 0.9900 |
| 8:37697144:GCTG:G | acceptor_gain | 0.9900 |
| 8:37697144:GCTGG:G | acceptor_gain | 0.9900 |
| 8:37696821:GAA:G | donor_gain | 0.9800 |
| 8:37697142:C:G | acceptor_gain | 0.9800 |
| 8:37697127:T:TA | acceptor_gain | 0.9700 |
| 8:37697141:A:AG | acceptor_gain | 0.9500 |
| 8:37696134:TCCTG:T | donor_gain | 0.9400 |
| 8:37696820:GGAA:G | donor_gain | 0.9300 |
| 8:37696801:G:GT | donor_gain | 0.9200 |
| 8:37696823:A:AG | donor_gain | 0.9200 |
| 8:37697146:T:A | acceptor_gain | 0.9200 |
| 8:37696343:GGC:G | donor_gain | 0.9100 |
| 8:37696822:A:T | donor_gain | 0.9000 |
| 8:37696823:A:G | donor_gain | 0.8900 |
| 8:37697133:T:A | acceptor_loss | 0.8900 |
AlphaMissense
3703 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 8:37697149:A:T | D83V | 1.000 |
| 8:37697160:A:C | S87R | 1.000 |
| 8:37697161:G:T | S87I | 1.000 |
| 8:37697162:C:A | S87R | 1.000 |
| 8:37697162:C:G | S87R | 1.000 |
| 8:37697163:C:A | P88T | 1.000 |
| 8:37697163:C:T | P88S | 1.000 |
| 8:37697164:C:A | P88H | 1.000 |
| 8:37697164:C:G | P88R | 1.000 |
| 8:37697164:C:T | P88L | 1.000 |
| 8:37697167:T:C | L89S | 1.000 |
| 8:37697167:T:G | L89W | 1.000 |
| 8:37697168:G:C | L89F | 1.000 |
| 8:37697168:G:T | L89F | 1.000 |
| 8:37697169:G:C | A90P | 1.000 |
| 8:37697173:T:A | L91Q | 1.000 |
| 8:37697173:T:C | L91P | 1.000 |
| 8:37697176:T:A | L92Q | 1.000 |
| 8:37697176:T:C | L92P | 1.000 |
| 8:37697176:T:G | L92R | 1.000 |
| 8:37697178:G:C | A93P | 1.000 |
| 8:37697179:C:A | A93D | 1.000 |
| 8:37697182:A:C | Q94P | 1.000 |
| 8:37697184:A:C | T95P | 1.000 |
| 8:37697185:C:T | T95I | 1.000 |
| 8:37697187:T:A | C96S | 1.000 |
| 8:37697187:T:C | C96R | 1.000 |
| 8:37697187:T:G | C96G | 1.000 |
| 8:37697188:G:A | C96Y | 1.000 |
| 8:37697188:G:C | C96S | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000393554 (8:37697947 G>A,C), RS1000764521 (8:37697716 CCGA>C), RS1000870254 (8:37695006 C>T), RS1001797882 (8:37697325 C>A), RS1001801392 (8:37695381 A>C), RS1002039638 (8:37699071 C>G), RS1002100390 (8:37696493 C>G), RS1002166524 (8:37697630 C>A), RS1003573142 (8:37695417 C>A), RS1004102810 (8:37700345 G>A,T), RS1004436969 (8:37700003 A>G), RS1004479407 (8:37700270 G>A,T), RS1004643875 (8:37694905 G>T), RS1005054795 (8:37694657 G>A,C), RS1005308390 (8:37696985 C>T)
Disease associations
OMIM: gene MIM:617045 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
8 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001585_3 | Breast size | 2.000000e-14 |
| GCST002932_37 | Manganese levels | 4.000000e-06 |
| GCST003124_28 | Mild influenza (H1N1) infection | 1.000000e-09 |
| GCST003985_8 | Breast size | 7.000000e-31 |
| GCST006655_9 | Breast size | 1.000000e-08 |
| GCST010118_160 | Type 2 diabetes | 2.000000e-10 |
| GCST010118_161 | Type 2 diabetes | 2.000000e-11 |
| GCST010244_118 | Triglyceride levels | 1.000000e-08 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:1001488 | influenza A (H1N1) |
| EFO:0004530 | triglyceride measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs79707182 | ZNF703 | 0.00 | 0 |
CTD chemical–gene interactions
51 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | decreases expression, increases expression | 4 |
| Estradiol | affects cotreatment, increases expression | 3 |
| bisphenol A | increases expression | 2 |
| trichostatin A | affects cotreatment, increases expression | 2 |
| (+)-JQ1 compound | decreases expression, increases expression | 2 |
| Vorinostat | affects cotreatment, increases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Tobacco Smoke Pollution | decreases expression, increases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| FR900359 | increases phosphorylation | 1 |
| dicrotophos | increases expression | 1 |
| urushiol | decreases expression | 1 |
| afimoxifene | decreases reaction, increases expression | 1 |
| 2,3-bis(3’-hydroxybenzyl)butyrolactone | affects cotreatment, increases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| perfluoro-n-nonanoic acid | decreases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| abrine | decreases expression | 1 |
| dorsomorphin | increases expression, affects cotreatment | 1 |
| licochalcone B | increases expression | 1 |
| jinfukang | affects cotreatment, increases expression | 1 |
| prothioconazole | decreases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Sunitinib | increases expression | 1 |
| Leflunomide | increases expression | 1 |
| Acetaminophen | increases expression | 1 |
| Air Pollutants | affects expression, increases abundance | 1 |
| Amiodarone | increases expression | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
| Cadmium | decreases expression, increases abundance | 1 |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.