ZNF888-AS1

Summary

ZNF888-AS1 (ZNF888 antisense RNA 1, HGNC:56044) is a long non-coding RNA gene on chromosome 19q13.41.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56044
Approved symbol	ZNF888-AS1
Name	ZNF888 antisense RNA 1
Location	19q13.41
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000269646
Ensembl biotype	lncRNA
Entrez	123706511
RNAcentral	URS00026A27DE — lncRNA, 523 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000594546

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000594546 — 2 exons

Exon	Start	End
ENSE00004222241	52923141	52923464
ENSE00004222242	52923673	52924079

Expression profiles

Bgee: expression breadth ubiquitous, 123 present calls, max score 92.91.

Top tissues by expression

123 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.91	gold quality
colonic epithelium	UBERON:0000397	73.07	gold quality
bone marrow cell	CL:0002092	69.27	silver quality
ganglionic eminence	UBERON:0004023	68.84	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	67.96	gold quality
endometrium	UBERON:0001295	67.36	gold quality
ventricular zone	UBERON:0003053	67.06	gold quality
bone marrow	UBERON:0002371	65.58	gold quality
lower esophagus mucosa	UBERON:0035834	64.82	gold quality
fundus of stomach	UBERON:0001160	64.73	gold quality
body of stomach	UBERON:0001161	64.41	gold quality
rectum	UBERON:0001052	64.15	gold quality
gall bladder	UBERON:0002110	63.14	gold quality
prostate gland	UBERON:0002367	62.84	gold quality
stomach	UBERON:0000945	62.70	gold quality
urinary bladder	UBERON:0001255	62.28	gold quality
sural nerve	UBERON:0015488	62.28	silver quality
lymph node	UBERON:0000029	61.29	gold quality
metanephros cortex	UBERON:0010533	61.09	gold quality
transverse colon	UBERON:0001157	61.01	gold quality
right uterine tube	UBERON:0001302	58.88	gold quality
placenta	UBERON:0001987	58.43	gold quality
monocyte	CL:0000576	58.09	gold quality
body of pancreas	UBERON:0001150	57.49	gold quality
pancreas	UBERON:0001264	57.30	gold quality
colon	UBERON:0001155	57.27	gold quality
primary visual cortex	UBERON:0002436	57.22	gold quality
cortex of kidney	UBERON:0001225	56.88	gold quality
vermiform appendix	UBERON:0001154	56.64	gold quality
blood	UBERON:0000178	56.55	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.68

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.