ZNRD2-DT

Summary

ZNRD2-DT (ZNRD2 divergent transcript, HGNC:27384) is a long non-coding RNA gene on chromosome 11q13.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27384
Approved symbol	ZNRD2-DT
Name	ZNRD2 divergent transcript
Location	11q13.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260233
Ensembl biotype	lncRNA
Entrez	254100
RNAcentral	URS0000759ACB — lncRNA, 1194 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 11 lncRNA, 1 TEC

ENST00000567594, ENST00000623234, ENST00000725946, ENST00000725947, ENST00000725948, ENST00000725949, ENST00000725950, ENST00000725951, ENST00000725952, ENST00000725953, ENST00000725954, ENST00000725955

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000567594 — 2 exons

Exon	Start	End
ENSE00004049985	65569656	65570891
ENSE00004050012	65571837	65572498

Expression profiles

Bgee: expression breadth ubiquitous, 159 present calls, max score 73.30.

FANTOM5 (CAGE): breadth broad, TPM avg 1.8665 / max 37.6472, expressed in 881 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
120642	0.7560	414
120643	0.5924	353
120641	0.5181	293

Top tissues by expression

245 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	73.30	gold quality
cortical plate	UBERON:0005343	72.25	gold quality
colonic epithelium	UBERON:0000397	70.84	silver quality
right hemisphere of cerebellum	UBERON:0014890	70.48	gold quality
endocervix	UBERON:0000458	70.33	gold quality
cerebellar hemisphere	UBERON:0002245	69.75	gold quality
cerebellar cortex	UBERON:0002129	69.68	gold quality
ganglionic eminence	UBERON:0004023	69.06	gold quality
right uterine tube	UBERON:0001302	68.87	gold quality
right adrenal gland cortex	UBERON:0035827	68.49	gold quality
hindlimb stylopod muscle	UBERON:0004252	68.46	gold quality
ectocervix	UBERON:0012249	68.43	gold quality
popliteal artery	UBERON:0002250	68.33	gold quality
tibial artery	UBERON:0007610	68.30	gold quality
prefrontal cortex	UBERON:0000451	68.28	gold quality
right coronary artery	UBERON:0001625	68.25	gold quality
bone marrow cell	CL:0002092	68.17	silver quality
left ovary	UBERON:0002119	68.14	gold quality
aorta	UBERON:0000947	68.04	gold quality
ascending aorta	UBERON:0001496	68.03	gold quality
thoracic aorta	UBERON:0001515	68.03	gold quality
body of uterus	UBERON:0009853	67.96	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	67.93	gold quality
right ovary	UBERON:0002118	67.93	gold quality
muscle of leg	UBERON:0001383	67.83	gold quality
descending thoracic aorta	UBERON:0002345	67.79	gold quality
cerebellum	UBERON:0002037	67.73	gold quality
right adrenal gland	UBERON:0001233	67.66	gold quality
gastrocnemius	UBERON:0001388	67.63	gold quality
stromal cell of endometrium	CL:0002255	67.44	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.