ZRANB2-DT

Summary

ZRANB2-DT (ZRANB2 divergent transcript, HGNC:43595) is a long non-coding RNA gene on chromosome 1p31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:43595
Approved symbol	ZRANB2-DT
Name	ZRANB2 divergent transcript
Location	1p31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229956
Ensembl biotype	lncRNA
Entrez	100852410
RNAcentral	URS000075D397 — lncRNA, 783 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 54 — 54 lncRNA

ENST00000411721, ENST00000413421, ENST00000415780, ENST00000430605, ENST00000455406, ENST00000583678, ENST00000585415, ENST00000585499, ENST00000586006, ENST00000587066, ENST00000587306, ENST00000590186, ENST00000591654, ENST00000594152, ENST00000596952, ENST00000599146, ENST00000600103, ENST00000608360, ENST00000608579, ENST00000623721, ENST00000624050, ENST00000625045, ENST00000625896, ENST00000626344, ENST00000626510, ENST00000627516, ENST00000627548, ENST00000627902, ENST00000628450, ENST00000628635, ENST00000628670, ENST00000628683, ENST00000628797, ENST00000630350, ENST00000630885, ENST00000630926, ENST00000630994, ENST00000634641, ENST00000653422, ENST00000654734, ENST00000663294, ENST00000670550, ENST00000671179, ENST00000828816, ENST00000828817, ENST00000828818, ENST00000828819, ENST00000828820, ENST00000828821, ENST00000828822, ENST00000828823, ENST00000828824, ENST00000828825, ENST00000828826

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000411721 — 2 exons

Exon	Start	End
ENSE00001654502	71250999	71251058
ENSE00001671055	71251662	71252119

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 87.04.

FANTOM5 (CAGE): breadth broad, TPM avg 1.3489 / max 108.5483, expressed in 704 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
3495	1.3489	704

Top tissues by expression

131 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.04	gold quality
corpus callosum	UBERON:0002336	84.97	gold quality
calcaneal tendon	UBERON:0003701	82.16	gold quality
colonic epithelium	UBERON:0000397	81.59	gold quality
sural nerve	UBERON:0015488	80.44	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.43	gold quality
adrenal tissue	UBERON:0018303	77.39	gold quality
bone marrow cell	CL:0002092	70.79	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	70.52	gold quality
islet of Langerhans	UBERON:0000006	69.71	gold quality
testis	UBERON:0000473	69.54	gold quality
ventricular zone	UBERON:0003053	69.44	gold quality
cortical plate	UBERON:0005343	69.04	gold quality
kidney	UBERON:0002113	69.02	gold quality
pancreas	UBERON:0001264	68.16	gold quality
right uterine tube	UBERON:0001302	68.03	gold quality
right testis	UBERON:0004534	67.52	gold quality
left testis	UBERON:0004533	67.46	gold quality
ovary	UBERON:0000992	67.39	gold quality
endometrium	UBERON:0001295	67.34	gold quality
left ovary	UBERON:0002119	67.27	gold quality
body of pancreas	UBERON:0001150	67.22	gold quality
adult mammalian kidney	UBERON:0000082	67.20	gold quality
bone marrow	UBERON:0002371	66.94	gold quality
tonsil	UBERON:0002372	66.69	gold quality
thyroid gland	UBERON:0002046	66.68	gold quality
ganglionic eminence	UBERON:0004023	66.60	gold quality
stromal cell of endometrium	CL:0002255	66.56	gold quality
left lobe of thyroid gland	UBERON:0001120	66.48	gold quality
primary visual cortex	UBERON:0002436	66.17	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	6.01

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.