ZSCAN2
gene geneOn this page
Also known as FLJ20595ZNF854
Summary
ZSCAN2 (zinc finger and SCAN domain containing 2, HGNC:20994) is a protein-coding gene on chromosome 15q25.2, encoding Zinc finger and SCAN domain-containing protein 2 (Q7Z7L9). May be involved in transcriptional regulation during the post-meiotic stages of spermatogenesis.
The protein encoded by this gene contains several copies of zinc finger motif, which is commonly found in transcriptional regulatory proteins. Studies in mice show that this gene is expressed during embryonic development, and specifically in the testis in adult mice, suggesting that it may play a role in regulating genes in germ cells. Alternative splicing of this gene results in several transcript variants encoding different isoforms.
Source: NCBI Gene 54993 — RefSeq curated summary.
At a glance
- GWAS associations: 22
- Clinical variants (ClinVar): 81 total
- MANE Select transcript:
NM_181877
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:20994 |
| Approved symbol | ZSCAN2 |
| Name | zinc finger and SCAN domain containing 2 |
| Location | 15q25.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FLJ20595, ZNF854 |
| Ensembl gene | ENSG00000176371 |
| Ensembl biotype | protein_coding |
| Entrez | 54993 |
Gene structure
Transcript identifiers
Ensembl transcripts: 17 — 15 protein_coding, 1 protein_coding_CDS_not_defined, 1 nonsense_mediated_decay
ENST00000303310, ENST00000327179, ENST00000334141, ENST00000358472, ENST00000379358, ENST00000442073, ENST00000448803, ENST00000485222, ENST00000502939, ENST00000538076, ENST00000540894, ENST00000540936, ENST00000541040, ENST00000546148, ENST00000546275, ENST00000928202, ENST00000928203
RefSeq mRNA: 3 — MANE Select: NM_181877
NM_001007072, NM_017894, NM_181877
CCDS: CCDS10329, CCDS32315, CCDS32316
Canonical transcript exons
ENST00000546148 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001230992 | 84603820 | 84604333 |
| ENSE00002316621 | 84601009 | 84601135 |
| ENSE00003624338 | 84620602 | 84623716 |
Expression profiles
Bgee: expression breadth ubiquitous, 216 present calls, max score 88.66.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 6.3797 / max 52.4539, expressed in 1710 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 148131 | 5.5585 | 1702 |
| 148132 | 0.5951 | 247 |
| 148136 | 0.0860 | 33 |
| 148134 | 0.0679 | 30 |
| 148135 | 0.0528 | 31 |
| 148133 | 0.0195 | 8 |
Top tissues by expression
255 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| sperm | CL:0000019 | 88.66 | gold quality |
| ganglionic eminence | UBERON:0004023 | 86.13 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 85.89 | gold quality |
| cortical plate | UBERON:0005343 | 84.53 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 83.61 | gold quality |
| oviduct epithelium | UBERON:0004804 | 83.59 | gold quality |
| body of pancreas | UBERON:0001150 | 81.92 | gold quality |
| pancreas | UBERON:0001264 | 80.56 | gold quality |
| stromal cell of endometrium | CL:0002255 | 79.92 | gold quality |
| apex of heart | UBERON:0002098 | 79.77 | gold quality |
| upper arm skin | UBERON:0004263 | 79.55 | gold quality |
| bone marrow cell | CL:0002092 | 79.50 | gold quality |
| pancreatic ductal cell | CL:0002079 | 79.21 | silver quality |
| ventricular zone | UBERON:0003053 | 79.14 | gold quality |
| monocyte | CL:0000576 | 79.09 | gold quality |
| leukocyte | CL:0000738 | 78.83 | gold quality |
| islet of Langerhans | UBERON:0000006 | 78.35 | gold quality |
| oocyte | CL:0000023 | 77.55 | silver quality |
| thymus | UBERON:0002370 | 77.42 | gold quality |
| testis | UBERON:0000473 | 77.20 | gold quality |
| buccal mucosa cell | CL:0002336 | 77.11 | gold quality |
| right lobe of liver | UBERON:0001114 | 77.01 | gold quality |
| gastrocnemius | UBERON:0001388 | 76.81 | gold quality |
| muscle of leg | UBERON:0001383 | 76.76 | gold quality |
| body of stomach | UBERON:0001161 | 76.44 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 76.40 | gold quality |
| left testis | UBERON:0004533 | 76.20 | gold quality |
| stomach | UBERON:0000945 | 75.96 | gold quality |
| colonic epithelium | UBERON:0000397 | 75.86 | gold quality |
| right testis | UBERON:0004534 | 75.72 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-6058 | no | 236.16 |
| E-ANND-3 | no | 4.40 |
Regulation
Is transcription factor: yes
JASPAR motifs
| Motif | Name | Family |
|---|---|---|
| MA2516.1 | ZSCAN2 | More than 3 adjacent zinc fingers |
JASPAR matrix evidence (PMIDs): PMID:39605320
miRNA regulators (miRDB)
10 targeting ZSCAN2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6845-3P | 99.94 | 66.88 | 1439 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-4279 | 99.19 | 66.70 | 2437 |
| HSA-MIR-211-3P | 98.14 | 66.77 | 1052 |
| HSA-MIR-6893-3P | 97.79 | 64.91 | 1238 |
| HSA-MIR-4675 | 97.69 | 64.82 | 774 |
| HSA-MIR-4741 | 97.69 | 64.14 | 883 |
| HSA-MIR-370-3P | 97.09 | 64.92 | 1221 |
| HSA-MIR-4683 | 95.29 | 65.98 | 631 |
| HSA-MIR-764 | 94.16 | 64.85 | 656 |
Literature-anchored findings (GeneRIF, showing 1)
- PMID:1937051 pertains to studies in mouse. (PMID:1937051)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Zscan2 | ENSMUSG00000038797 |
| rattus_norvegicus | Zscan2 | ENSRNOG00000022164 |
Paralogs (38): ZFX (ENSG00000005889), ZBTB11 (ENSG00000066422), ZFAT (ENSG00000066827), ZFY (ENSG00000067646), ZNF586 (ENSG00000083828), IKZF5 (ENSG00000095574), ZNF419 (ENSG00000105136), ZNF549 (ENSG00000121406), ZSCAN20 (ENSG00000121903), ZNF304 (ENSG00000131845), PRDM15 (ENSG00000141956), ZNF660 (ENSG00000144792), ZNF711 (ENSG00000147180), ZNF773 (ENSG00000152439), ZNF256 (ENSG00000152454), ZNF837 (ENSG00000152475), ZNF691 (ENSG00000164011), ZNF610 (ENSG00000167554), E4F1 (ENSG00000167967), ZNF562 (ENSG00000171466), ZNF561 (ENSG00000171469), ZNF584 (ENSG00000171574), ZIK1 (ENSG00000171649), ZNF570 (ENSG00000171827), ZNF552 (ENSG00000178935), ZNF154 (ENSG00000179909), ZNF792 (ENSG00000180884), ZNF793 (ENSG00000188227), ZNF548 (ENSG00000188785), ZNF79 (ENSG00000196152), ZNF418 (ENSG00000196724), ZNF772 (ENSG00000197128), ZNF583 (ENSG00000198440), ZNF480 (ENSG00000198464), ZNF551 (ENSG00000204519), ZNF134 (ENSG00000213762), ZNF587B (ENSG00000269343), ZNF8 (ENSG00000278129)
Protein
Protein identifiers
Zinc finger and SCAN domain-containing protein 2 — Q7Z7L9 (reviewed: Q7Z7L9)
Alternative names: Zinc finger protein 29 homolog, Zinc finger protein 854
All UniProt accessions (10): A0A0C4DFQ3, Q7Z7L9, F5GY18, F5GZ04, F5H1K4, F5H2D8, F5H3F3, F5H4P1, F5H789, F8W6Y9
UniProt curated annotations — full annotation on UniProt →
Function. May be involved in transcriptional regulation during the post-meiotic stages of spermatogenesis.
Subcellular location. Nucleus.
Similarity. Belongs to the krueppel C2H2-type zinc-finger protein family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q7Z7L9-1 | 1 | yes |
| Q7Z7L9-3 | 3 | |
| Q7Z7L9-4 | 4 |
RefSeq proteins (3): NP_001007073, NP_060364, NP_870992* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR003309 | SCAN_dom | Domain |
| IPR013087 | Znf_C2H2_type | Domain |
| IPR036236 | Znf_C2H2_sf | Homologous_superfamily |
| IPR038269 | SCAN_sf | Homologous_superfamily |
| IPR050329 | GLI_C2H2-zinc-finger | Family |
Pfam: PF00096, PF02023
UniProt features (25 total): zinc finger region 14, splice variant 4, region of interest 2, sequence conflict 2, chain 1, domain 1, sequence variant 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q7Z7L9-F1 | 70.22 | 0.17 |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 90 (showing top):
DARWICHE_PAPILLOMA_PROGRESSION_RISK, GOBP_MALE_GAMETE_GENERATION, SOX9_B1, IRF_Q6, GOBP_DEVELOPMENTAL_PROCESS_INVOLVED_IN_REPRODUCTION, GOMF_SEQUENCE_SPECIFIC_DNA_BINDING, MIKKELSEN_MCV6_LCP_WITH_H3K4ME3, MIKKELSEN_MEF_LCP_WITH_H3K4ME3, MIKKELSEN_IPS_LCP_WITH_H3K4ME3, MIKKELSEN_NPC_LCP_WITH_H3K4ME3, DUTERTRE_ESTRADIOL_RESPONSE_24HR_DN, GOBP_POSITIVE_REGULATION_OF_TRANSCRIPTION_BY_RNA_POLYMERASE_II, IRF1_01, CTIP_DN.V1_DN, PKCA_DN.V1_DN
GO Biological Process (4): regulation of transcription by RNA polymerase II (GO:0006357), spermatogenesis (GO:0007283), cell differentiation (GO:0030154), positive regulation of transcription by RNA polymerase II (GO:0045944)
GO Molecular Function (6): RNA polymerase II transcription regulatory region sequence-specific DNA binding (GO:0000977), DNA-binding transcription factor activity, RNA polymerase II-specific (GO:0000981), zinc ion binding (GO:0008270), transcription cis-regulatory region binding (GO:0000976), DNA binding (GO:0003677), metal ion binding (GO:0046872)
GO Cellular Component (1): nucleus (GO:0005634)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| transcription by RNA polymerase II | 2 |
| regulation of transcription by RNA polymerase II | 2 |
| regulation of DNA-templated transcription | 1 |
| developmental process involved in reproduction | 1 |
| male gamete generation | 1 |
| cellular developmental process | 1 |
| positive regulation of DNA-templated transcription | 1 |
| transcription cis-regulatory region binding | 1 |
| chromatin | 1 |
| RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1 |
| DNA-binding transcription factor activity | 1 |
| transition metal ion binding | 1 |
| transcription regulatory region nucleic acid binding | 1 |
| sequence-specific double-stranded DNA binding | 1 |
| nucleic acid binding | 1 |
| cation binding | 1 |
| intracellular membrane-bounded organelle | 1 |
Protein interactions and networks
STRING
462 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ZSCAN2 | SPATA24 | Q86W54 | 542 |
| ZSCAN2 | SCAND1 | P57086 | 510 |
| ZSCAN2 | D6RC18 | D6RC18 | 503 |
| ZSCAN2 | TSKU | Q8WUA8 | 454 |
| ZSCAN2 | TDRD3 | Q9H7E2 | 449 |
| ZSCAN2 | FEM1B | Q9UK73 | 444 |
| ZSCAN2 | MAP10 | Q9P2G4 | 437 |
| ZSCAN2 | NME8 | Q8N427 | 433 |
| ZSCAN2 | ING5 | Q8WYH8 | 426 |
| ZSCAN2 | ZNF174 | Q15697 | 423 |
| ZSCAN2 | C7orf25 | Q9BPX7 | 419 |
| ZSCAN2 | ZNF202 | O95125 | 403 |
| ZSCAN2 | ZNF24 | P17028 | 391 |
| ZSCAN2 | ZNF839 | A8K0R7 | 385 |
| ZSCAN2 | TMEM169 | Q96HH4 | 383 |
IntAct
6 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ZSCAN2 | UQCRHL | psi-mi:“MI:0915”(physical association) | 0.400 |
| NOTCH2 | ZNF320 | psi-mi:“MI:0914”(association) | 0.350 |
| PNMA8A | AP3B1 | psi-mi:“MI:0914”(association) | 0.350 |
| TIMM50 | ZNF320 | psi-mi:“MI:0914”(association) | 0.350 |
| HDAC8 | SEC16A | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (9): ZSCAN2 (Proximity Label-MS), ZSCAN2 (Affinity Capture-MS), ZSCAN2 (Affinity Capture-MS), ZSCAN2 (Affinity Capture-MS), ZSCAN2 (Affinity Capture-MS), ZSCAN2 (Affinity Capture-MS), ZSCAN2 (Affinity Capture-MS), ZSCAN2 (Affinity Capture-MS), ZSCAN2 (Affinity Capture-MS)
ESM2 similar proteins: A1YEP8, A1YEV9, A1YFW2, A1YG26, A1YG48, A1YG60, A2T6E3, A2T6V8, A2T712, A2T736, A2T7D2, A2T7F4, A2T7L7, A2T812, A6QNZ0, O14709, O15535, O43296, O43309, P10073, P17023, P17097, P49910, Q07231, Q12901, Q15776, Q16670, Q1LZ87, Q3MJ62, Q53GI3, Q571J5, Q5JNZ3, Q5RAE6, Q5RBX0, Q5RCD9, Q5RJ54, Q7Z7L9, Q86W11, Q8IZ26, Q8NF99
Diamond homologs: A1YEP8, A1YEQ3, A1YEV9, A1YFW2, A1YFW6, A1YG26, A1YG48, A1YG60, A1YGJ4, A1YGK6, A2T6E3, A2T6V8, A2T6W2, A2T712, A2T736, A2T7D2, A2T7D7, A2T7F2, A2T7F4, A2T7L7, A2T812, A6QNZ0, A6QPT6, B2KFW1, O14709, O14771, O14978, O15535, O43309, O60304, O95125, P10073, P17022, P17028, P17029, P17040, P28698, P49910, P51815, P59923
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
81 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 72 |
| Likely benign | 5 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
864 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 15:84604331:GTG:G | donor_gain | 1.0000 |
| 15:84616421:G:GT | donor_gain | 1.0000 |
| 15:84620592:ATT:A | acceptor_gain | 1.0000 |
| 15:84620599:CAGAT:C | acceptor_loss | 1.0000 |
| 15:84620600:A:AG | acceptor_gain | 1.0000 |
| 15:84620600:AGAT:A | acceptor_loss | 1.0000 |
| 15:84620601:G:GG | acceptor_gain | 1.0000 |
| 15:84603816:TCAGC:T | acceptor_loss | 0.9900 |
| 15:84603817:CAG:C | acceptor_loss | 0.9900 |
| 15:84603818:A:AG | acceptor_gain | 0.9900 |
| 15:84603818:AGC:A | acceptor_gain | 0.9900 |
| 15:84603818:AGCG:A | acceptor_gain | 0.9900 |
| 15:84603818:AGCGG:A | acceptor_gain | 0.9900 |
| 15:84603819:G:GG | acceptor_gain | 0.9900 |
| 15:84603819:G:GT | acceptor_loss | 0.9900 |
| 15:84603819:GC:G | acceptor_gain | 0.9900 |
| 15:84603819:GCG:G | acceptor_gain | 0.9900 |
| 15:84603819:GCGG:G | acceptor_gain | 0.9900 |
| 15:84603819:GCGGG:G | acceptor_gain | 0.9900 |
| 15:84604301:TGG:T | donor_gain | 0.9900 |
| 15:84604327:G:GT | donor_gain | 0.9900 |
| 15:84604328:A:T | donor_gain | 0.9900 |
| 15:84620592:A:AG | acceptor_gain | 0.9900 |
| 15:84620593:T:G | acceptor_gain | 0.9900 |
| 15:84620594:T:TA | acceptor_gain | 0.9900 |
| 15:84620601:GA:G | acceptor_gain | 0.9900 |
| 15:84620601:GATT:G | acceptor_gain | 0.9900 |
| 15:84603821:G:A | acceptor_gain | 0.9800 |
| 15:84620601:GATTT:G | acceptor_gain | 0.9800 |
| 15:84601184:CCGAG:C | donor_loss | 0.9700 |
AlphaMissense
4139 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 15:84621138:T:C | F315L | 1.000 |
| 15:84621140:C:A | F315L | 1.000 |
| 15:84621140:C:G | F315L | 1.000 |
| 15:84621222:T:C | F343L | 1.000 |
| 15:84621224:T:A | F343L | 1.000 |
| 15:84621224:T:G | F343L | 1.000 |
| 15:84621306:T:C | F371L | 1.000 |
| 15:84621308:T:A | F371L | 1.000 |
| 15:84621308:T:G | F371L | 1.000 |
| 15:84621054:T:C | F287L | 0.999 |
| 15:84621056:T:A | F287L | 0.999 |
| 15:84621056:T:G | F287L | 0.999 |
| 15:84621073:T:C | L293P | 0.999 |
| 15:84621083:C:A | H296Q | 0.999 |
| 15:84621083:C:G | H296Q | 0.999 |
| 15:84621157:T:C | L321P | 0.999 |
| 15:84621172:G:C | R326P | 0.999 |
| 15:84621241:T:C | L349P | 0.999 |
| 15:84621325:T:C | L377P | 0.999 |
| 15:84621390:T:C | F399L | 0.999 |
| 15:84621392:C:A | F399L | 0.999 |
| 15:84621392:C:G | F399L | 0.999 |
| 15:84621474:T:C | F427L | 0.999 |
| 15:84621476:C:A | F427L | 0.999 |
| 15:84621476:C:G | F427L | 0.999 |
| 15:84621810:T:C | F539L | 0.999 |
| 15:84621812:C:A | F539L | 0.999 |
| 15:84621812:C:G | F539L | 0.999 |
| 15:84621894:T:C | F567L | 0.999 |
| 15:84621896:T:A | F567L | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000029694 (15:84616411 C>T), RS1000033862 (15:84622220 G>A,C), RS1000074877 (15:84607882 C>T), RS1000170774 (15:84622959 G>C,T), RS1000459126 (15:84605173 A>AT), RS1000529069 (15:84612157 C>T), RS1000549252 (15:84616697 A>G,T), RS1000558610 (15:84600871 T>C), RS1000623715 (15:84611858 C>T), RS1000693681 (15:84617478 C>T), RS1000704425 (15:84623180 C>A,T), RS1000877945 (15:84600479 C>A,T), RS1000998083 (15:84606286 C>T), RS1001121005 (15:84615982 C>G), RS1001142867 (15:84605989 A>C,G)
Disease associations
OMIM: gene `` | disease phenotypes:
GenCC curated gene-disease
Mondo (1): prostate cancer (MONDO:0008315)
Orphanet (1): Familial prostate cancer (Orphanet:1331)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
22 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002539_78 | Schizophrenia | 2.000000e-11 |
| GCST004521_253 | Autism spectrum disorder or schizophrenia | 6.000000e-11 |
| GCST004562_151 | Waist circumference adjusted for body mass index | 2.000000e-08 |
| GCST004562_47 | Waist circumference adjusted for body mass index | 6.000000e-09 |
| GCST004563_133 | Waist circumference adjusted for BMI (joint analysis main effects and physical activity interaction) | 3.000000e-08 |
| GCST004563_200 | Waist circumference adjusted for BMI (joint analysis main effects and physical activity interaction) | 8.000000e-06 |
| GCST004563_28 | Waist circumference adjusted for BMI (joint analysis main effects and physical activity interaction) | 1.000000e-07 |
| GCST004564_181 | Waist circumference adjusted for BMI in active individuals | 1.000000e-06 |
| GCST004564_182 | Waist circumference adjusted for BMI in active individuals | 1.000000e-08 |
| GCST004564_183 | Waist circumference adjusted for BMI in active individuals | 2.000000e-06 |
| GCST004564_184 | Waist circumference adjusted for BMI in active individuals | 5.000000e-06 |
| GCST004564_185 | Waist circumference adjusted for BMI in active individuals | 4.000000e-08 |
| GCST004946_90 | Schizophrenia | 5.000000e-12 |
| GCST006630_69 | Diastolic blood pressure | 1.000000e-10 |
| GCST006803_69 | Schizophrenia | 9.000000e-10 |
| GCST008103_25 | Bipolar disorder | 3.000000e-08 |
| GCST008163_168 | Height | 9.000000e-08 |
| GCST008595_97 | Cognitive ability, years of educational attainment or schizophrenia (pleiotropy) | 3.000000e-10 |
| GCST009600_133 | Anorexia nervosa, attention-deficit/hyperactivity disorder, autism spectrum disorder, bipolar disorder, major depression, obsessive-compulsive disorder, schizophrenia, or Tourette syndrome (pleiotropy) | 5.000000e-14 |
| GCST90011899_116 | Aspartate aminotransferase levels | 1.000000e-09 |
| GCST90020028_1357 | Hip circumference adjusted for BMI | 5.000000e-11 |
| GCST90020029_766 | Waist circumference adjusted for body mass index | 3.000000e-08 |
EFO canonical traits (7, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007789 | BMI-adjusted waist circumference |
| EFO:0008002 | physical activity measurement |
| EFO:0006336 | diastolic blood pressure |
| EFO:0004337 | intelligence |
| EFO:0004784 | self reported educational attainment |
| EFO:0004736 | aspartate aminotransferase measurement |
| EFO:0008039 | BMI-adjusted hip circumference |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D011471 | Prostatic Neoplasms | C04.588.945.440.770; C12.100.500.260.750; C12.100.500.565.625; C12.200.294.260.750; C12.200.294.565.625; C12.200.758.409.750; C12.900.619.750 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
22 total (human), top 22 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | increases methylation, affects methylation | 2 |
| Cisplatin | affects expression, increases expression | 2 |
| triphenyl phosphate | affects expression | 1 |
| sodium arsenite | decreases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| cupric oxide | increases expression | 1 |
| 4-aminophenylarsenoxide | affects binding, decreases reaction | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| bisphenol S | decreases methylation | 1 |
| Decitabine | affects expression | 1 |
| Arsenic Trioxide | affects binding, decreases reaction | 1 |
| Doxorubicin | decreases expression | 1 |
| Ethyl Methanesulfonate | increases expression | 1 |
| Formaldehyde | increases expression | 1 |
| Hydrogen Peroxide | affects expression | 1 |
| Methapyrilene | increases methylation | 1 |
| Methyl Methanesulfonate | increases expression | 1 |
| Nickel | decreases expression | 1 |
| Tretinoin | decreases expression | 1 |
| Valproic Acid | affects expression | 1 |
| Aflatoxin B1 | increases methylation | 1 |
| Copper Sulfate | increases expression | 1 |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00029224 | PHASE4 | COMPLETED | Treatment With Zoledronic Acid in Patients With Breast Cancer, Multiple Myeloma, and Prostate Cancer With Cancer Related Bone Lesions |
| NCT00035997 | PHASE4 | COMPLETED | Open-label Trial on the Effect of I.V. Zoledronic Acid 4 mg on Bone Density in Hormone Sensitive Prostate Cancer Patients With Bone Metastasis |
| NCT00063609 | PHASE4 | COMPLETED | The Effect of Zoledronic Acid on Bone Loss in Prostate Cancer Patients Undergoing Androgen Deprivation Therapy |
| NCT00103623 | PHASE4 | SUSPENDED | The Plenaxis® Experience Study |
| NCT00106392 | PHASE4 | COMPLETED | A Safety and Efficacy Study of Prograf in the Prevention of Erectile Dysfunction After Radical Prostatectomy |
| NCT00185029 | PHASE4 | UNKNOWN | MR-Lymphography and Lymph Node Staging in Prostate Cancer |
| NCT00199485 | PHASE4 | COMPLETED | Angelica Sinensis for the Treatment of Hot Flashes in Men Undergoing LHRH Therapy for Prostate Cancer |
| NCT00219219 | PHASE4 | COMPLETED | Zoledronic Acid in the Prevention of Skeletal-related Events in Hormone Refractory and Hormone-sensitive Prostate Cancer Patients With Bone Metastases |
| NCT00219271 | PHASE4 | COMPLETED | Effect Of Zoledronic Acid On Circulating And Bone Marrow-Residing Prostate Cancer Cells In Patients With Clinically Localized Prostate Cancer |
| NCT00237146 | PHASE4 | COMPLETED | Study to Evaluate Zoledronic Acid on Quality of Life and Skeletal-related Events as Adjuvant Treatment in Patients With Hormone-naïve Prostate Cancer and Bone Metastasis Who Have Undergone Orchiectomy |
| NCT00242554 | PHASE4 | COMPLETED | Open-label Phase IV Clinical Trial to Evaluate the Safety and Tolerability of Zoledronic Acid in Patients With Prostate Cancer and Bone Metastases |
| NCT00280098 | PHASE4 | COMPLETED | Docetaxel in the Treatment of Hormone Refractory Prostate Cancer |
| NCT00293696 | PHASE4 | COMPLETED | Casodex/Zoladex Biomarkers in Localised Prostate Cancer |
| NCT00334139 | PHASE4 | COMPLETED | Effect of Zoledronic Acid on Bone Metabolism in Patients With Bone Metastasis and Prostate or Breast Cancer |
| NCT00375765 | PHASE4 | COMPLETED | Effects On Dihydrotestosterone Regulated Gene Expression In Benign Prostatic Hyperplasia Or Prostate Cancer |
| NCT00391690 | PHASE4 | COMPLETED | Evaluation of Bone Markers as Diagnostic Tools for Early Detection of Bone Metastases in Patients With High Risk Prostate Cancer |
| NCT00422708 | PHASE4 | COMPLETED | Local Anesthesia for Prostate Biopsy |
| NCT00526331 | PHASE4 | COMPLETED | Evaluation of Arterial Pressure Based Cardiac Output for Goal-Directed Perioperative Therapy |
| NCT00590213 | PHASE4 | COMPLETED | Compare the Value of Prophylactic Versus Therapeutic Breast Radiotherapy in CASODEX |
| NCT00629330 | PHASE4 | TERMINATED | Dissemination of Prostate Cancer Screening to PCP’s in African American Communities |
| NCT00771966 | PHASE4 | COMPLETED | Radical Prostatectomy and Perioperative Fluid Therapy |
| NCT00805701 | PHASE4 | COMPLETED | Study Assessing The Efficacy And Safety Of Avodart (Dutasteride) At Improving Urinary Symptoms In Men With Prostate Cancer Who Are Undergoing Seed Implantation |
| NCT00859027 | PHASE4 | COMPLETED | Effect Of Risedronate On Bone Mass In Older Men Receiving Neoadjuvant Therapy For Prostate Cancer |
| NCT00906269 | PHASE4 | UNKNOWN | Can Hyperbaric Oxygen Improve Erectile Function Following Surgery for Prostate Cancer |
| NCT00953277 | PHASE4 | COMPLETED | Study of Nerve Reconstruction Using AVANCE in Subjects Who Undergo Robotic Assisted Prostatectomy for Treatment of Prostate Cancer |
| NCT00982800 | PHASE4 | COMPLETED | Does Postoperative Gabapentin Reduce Pain, Opioid Consumption and Anxiety and Have a Positive Effect on Health Related Quality of Life After Radical Prostatectomy? |
| NCT01083199 | PHASE4 | COMPLETED | Global Performance Evaluation of the AMS CONTINUUM™ Device |
| NCT01136226 | PHASE4 | COMPLETED | Evaluate Recovery of Testosterone for Patients Using Eligard |
| NCT01161563 | PHASE4 | COMPLETED | Randomized Crossover Trial to Assess the Tolerability of Gonadotropin Releasing Hormone (GnRH) Analogue Administration |
| NCT01230905 | PHASE4 | COMPLETED | Study to Monitor the Effects of Androgen Suppression Treatment on the Heart |
| NCT01296672 | PHASE4 | COMPLETED | 3 Month Finasteride Challenge Test Can Significantly Improve the Performance of Screening for Prostate Cancer |
| NCT01365143 | PHASE4 | TERMINATED | Prospective Randomized Trial Comparing Robotic Versus Open Radical Prostatectomy |
| NCT01379742 | PHASE4 | UNKNOWN | Comparison of Between ThinSeed™ and OncoSeed™ for Permanent Prostate Brachytherapy |
| NCT01486563 | PHASE4 | COMPLETED | Hydroxyethyl Starch and Renal Function After Radical Prostatectomy |
| NCT01511874 | PHASE4 | COMPLETED | Efficacy and Safety Study of ELIGARD 22.5mg With Prostate Cancer |
| NCT01512472 | PHASE4 | TERMINATED | Firmagon (Degarelix) Intermittent Therapy |
| NCT01547416 | PHASE4 | COMPLETED | The Effect of Combined General/Epidural Anesthesia Versus General Anesthesia on Diaphragmatic Function |
| NCT01571544 | PHASE4 | COMPLETED | The Use of Thermal Suits as Preventing Hypothermia During Surgery |
| NCT01581749 | PHASE4 | UNKNOWN | Evaluation of Truebeam for Low-Intermediate Risk Prostate Cancer |
| NCT01649635 | PHASE4 | COMPLETED | Study of Cabazitaxel Combined With Prednisone and Prophylaxis of Neutropenia Complications in the Treatment of Patients With Metastatic Castration-resistant Prostate Cancer |
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.