SCHEMBL12499014

SCHEMBL12499014

C[C@@]1(C(=O)O)[C@@H](c2ccccc2)[C@@H]1c1ccc(-c2ncc(C(F)(F)F)cn2)cc1

nearest known ligand 0.59

Predicted protein targets (top 15)

geneUniProtsupporting neighboursconfidence
HDAC4 P56524 17/20 0.59
HDAC3 O15379 3/20 0.48
HDAC1 Q13547 3/20 0.48
HDAC7 Q8WUI4 3/20 0.48
HDAC8 Q9BY41 3/20 0.48
HDAC6 Q9UBN7 3/20 0.48
HDAC9 Q9UKV0 3/20 0.48
HDAC5 Q9UQL6 3/20 0.48
NCOR2 Q9Y618 3/20 0.48
PTGS1 P23219 1/20 0.38
PTGS2 P35354 1/20 0.38
NPC1 O15118 1/20 0.37
RAB9A P51151 1/20 0.37
GLA P06280 1/20 0.37
HPGD P15428 1/20 0.37

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL15769211 1.00 HDAC4 (0.59) HDAC4HDAC3HDAC1HDAC7HDAC8
SCHEMBL12499116 0.84 HDAC4 (0.62) HDAC4HDAC3HDAC1HDAC7HDAC8
SCHEMBL12498065 0.84 HDAC4 (0.77) HDAC4HDAC3HDAC1HDAC7HDAC8
SCHEMBL15768749 0.84 HDAC4 (0.62) HDAC4HDAC3HDAC1HDAC7HDAC8
SCHEMBL15769110 0.83 HDAC4 (0.59) HDAC4HDAC3HDAC1HDAC7HDAC8
SCHEMBL12498073 0.83 HDAC4 (0.59) HDAC4HDAC3HDAC1HDAC7HDAC8
SCHEMBL15769088 0.82 HDAC4 (0.59) HDAC4HDAC3HDAC1HDAC7HDAC8
SCHEMBL12499697 0.82 HDAC4 (0.59) HDAC4HDAC3HDAC1HDAC7HDAC8
SCHEMBL12499633 0.80 HDAC4 (0.68) HDAC4HDAC3HDAC1HDAC7HDAC8
SCHEMBL15768991 0.80 HDAC4 (0.68) HDAC4HDAC3HDAC1HDAC7HDAC8

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 4 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-9765054-B2 Histone deacetylase inhibitors and compositions and methods of use thereof CHDI FOUNDATION, INC. (US) 2017-09-19 US disclosed
US-20140163009-A1 HISTONE DEACETYLASE INHIBITORS AND COMPOSITIONS AND METHODS OF USE THEREOF CHDI Foundation (US) 2014-06-12 US disclosed
EP-2667709-A1 HISTONE DEACETYLASE INHIBITORS AND COMPOSITIONS AND METHODS OF USE THEREOF CHDI Foundation, Inc. (US) 2013-12-04 EP disclosed
WO-2012103008-A1 HISTONE DEACETYLASE INHIBITORS AND COMPOSITIONS AND METHODS OF USE THEREOF CHDI FOUNDATION, INC. (US) 2012-08-02 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20140163009-A1 HISTONE DEACETYLASE INHIBITORS AND COMPOSITIONS AND METHODS OF USE THEREOF HDAC1, HDAC7, HDAC5 HDAC4 10/4885HDAC3 5/4885HDAC1 1/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.