Trifluoroacetic Acid

Trifluoroacetic Acid

SCHEMBL2073540

CC(=O)CCCCC[C@H](NC(=O)C1CCN(C)CC1)c1ncc(-c2ccccc2)[nH]1.O=C(O)C(F)(F)F.O=C(O)C(F)(F)F

nearest known ligand 0.91

Full drug profile on Sugi Atlas →

Predicted protein targets (top 5)

geneUniProtsupporting neighboursconfidence
HDAC1 Q13547 20/20 0.91
HDAC2 Q92769 3/20 0.75
HDAC3 O15379 3/20 0.75
HDAC6 Q9UBN7 3/20 0.75
HDAC8 Q9BY41 1/20 0.65

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Trifluoroacetic Acid SCHEMBL2072688 0.98 HDAC1 (0.91) HDAC1HDAC2HDAC3HDAC6
Trifluoroacetic Acid SCHEMBL2071171 0.96 HDAC1 (0.91) HDAC1HDAC2HDAC3HDAC6HDAC8
SCHEMBL15514069 0.95 HDAC1 (1.00) HDAC1HDAC2HDAC3HDAC6HDAC8
Hydrochloric Acid SCHEMBL15512805 0.94 HDAC1 (0.98) HDAC1HDAC2HDAC3HDAC6HDAC8
Hydrochloric Acid SCHEMBL2073552 0.94 HDAC1 (0.98) HDAC1HDAC2HDAC3HDAC6HDAC8
Trifluoroacetic Acid SCHEMBL2073933 0.94 HDAC1 (0.91) HDAC1HDAC2HDAC3HDAC6HDAC8
SCHEMBL15513210 0.94 HDAC1 (1.00) HDAC1HDAC2HDAC3HDAC6HDAC8
Trifluoroacetic Acid SCHEMBL2074723 0.93 HDAC1 (0.89) HDAC1HDAC2HDAC3HDAC6HDAC8
Trifluoroacetic Acid SCHEMBL2073472 0.93 HDAC1 (0.79) HDAC1HDAC2HDAC3HDAC6HDAC8
Trifluoroacetic Acid SCHEMBL2074304 0.93 HDAC1 (0.89) HDAC1HDAC2HDAC3HDAC6HDAC8

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
EP-1828171-B1 HETEROCYCLE DERIVATIVES AS HISTONE DEACETYLASE (HDAC) INHIBITORS ANGELETTI P IST RICHERCHE BIO (IT) 2014-03-12 EP claimed
EP-1828171-B1 HETEROCYCLE DERIVATIVES AS HISTONE DEACETYLASE (HDAC) INHIBITORS ANGELETTI P IST RICHERCHE BIO (IT) 2014-03-12 EP disclosed
US-7863294-B2 Heterocycle derivatives as histone deacetylase (HDAC) inhibitors INSTITUTO DI RICERCHE DI BIOLOGIA MOLECOLARE P. ANGELETTI SPA (IT) 2011-01-04 US disclosed
US-20090048228-A1 Heterocycle Derivatives As Histone Deacetylase (Hdac) Inhibitors MSD ITALIA S.R.L. (IT) 2009-02-19 US disclosed
EP-1828171-A2 HETEROCYCLE DERIVATIVES AS HISTONE DEACETYLASE (HDAC) INHIBITORS ISTITUTO DI RICERCHE DI BIOLOGIA MOLECOLARE P. ANGELETTI S.P.A. (IT) 2007-09-05 EP disclosed
WO-2006061638-A2 HETEROCYCLE DERIVATIVES AS HISTONE DEACETYLASE (HDAC) INHIBITORS ISTITUTO DI RICERCHE DI BIOLOGIA MOLECOLARE P ANGELETTI SPA (IT) 2006-06-15 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20090048228-A1 Heterocycle Derivatives As Histone Deacetylase (Hdac) Inhibitors HDAC1, HDAC5, HDAC11 HDAC1 1/4885HDAC2 10/4885HDAC3 7/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.