SCHEMBL3534747

SCHEMBL3534747

O=Cc1n[nH]c2c(C=O)cccc12

nearest known ligand 0.39

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
TRIM24 O15164 3/20 0.39
TRIM33 Q9UPN9 3/20 0.39
KMT2A Q03164 3/20 0.38
MEN1 O00255 2/20 0.38
LMNA P02545 1/20 0.38
THRB P10828 1/20 0.38
BLM P54132 1/20 0.38
TDP1 Q9NUW8 1/20 0.38
CYP2A6 P11509 2/20 0.35
IMPDH2 P12268 1/20 0.35
ERN1 O75460 2/20 0.34
CHEK1 O14757 1/20 0.34
FLT3 P36888 1/20 0.34
PLK3 Q9H4B4 1/20 0.34
PIM1 P11309 5/20 0.33
PIM3 Q86V86 5/20 0.33
ALDH1A1 P00352 1/20 0.32
TSHR P16473 1/20 0.32
PIM2 Q9P1W9 1/20 0.32
MAP4K4 O95819 1/20 0.32

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL3607855 0.81 TRIM24 (0.50) TRIM24TRIM33KMT2AMEN1LMNA
SCHEMBL30609102 0.80 TRIM24 (0.45) TRIM24TRIM33KMT2AMEN1LMNA
SCHEMBL29951275 0.80 TRIM24 (0.38) TRIM24TRIM33KMT2AMEN1LMNA
SCHEMBL3362168 0.80 PIM1 (0.42) KMT2AMEN1BLMCYP2A6CHEK1
SCHEMBL17829677 0.80 CHEK1 (0.58) KMT2AMEN1TDP1CYP2A6CHEK1
SCHEMBL29952281 0.80 AR (0.36) LMNAERN1CHEK1FLT3PLK3
SCHEMBL19584789 0.80 TRIM24 (0.45) TRIM24TRIM33KMT2AMEN1LMNA
SCHEMBL3534877 0.75 MAPT (0.48) KMT2AMEN1THRBBLMTDP1
SCHEMBL29732162 0.71 PIM1 (0.50) TRIM24TRIM33KMT2AMEN1LMNA
SCHEMBL28468883 0.71 PIM1 (0.50) TRIM24TRIM33KMT2AMEN1LMNA

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 8 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7642278-B2 Nitrogen compounds such as 3-(5-morpholin-4-yl-1H-benz-imidazol-2-yl)-1H-indazole and/or isomers, used as immunology modulators, antidiabetic agents, antiogenesis inhibitors or for prophylaxis of Alzheimer's disease NOVARTIS VACCINES AND DIAGNOSTICS, INC. (US) 2010-01-05 US disclosed
US-7642278-B2 Nitrogen compounds such as 3-(5-morpholin-4-yl-1H-benz-imidazol-2-yl)-1H-indazole and/or isomers, used as immunology modulators, antidiabetic agents, antiogenesis inhibitors or for prophylaxis of Alzheimer's disease NOVARTIS VACCINES AND DIAGNOSTICS, INC. (US) 2010-01-05 US disclosed
US-7642278-B2 Nitrogen compounds such as 3-(5-morpholin-4-yl-1H-benz-imidazol-2-yl)-1H-indazole and/or isomers, used as immunology modulators, antidiabetic agents, antiogenesis inhibitors or for prophylaxis of Alzheimer's disease NOVARTIS VACCINES AND DIAGNOSTICS, INC. (US) 2010-01-05 US disclosed
US-7064215-B2 Indazole benzimidazole compounds CHIRON CORPORATION (US) 2006-06-20 US disclosed
US-20060079564-A1 Indazole benzimidazole compounds CHIRON CORPORATION 2006-04-13 US disclosed
EP-1401831-A1 INDAZOLE BENZIMIDAZOLE COMPOUNDS AS TYROSINE AND SERINE/THREONINE KINASE INHIBITORS CHIRON CORPORATION (US) 2004-03-31 EP disclosed
US-20030207883-A1 Indazole benzimidazole compounds CHIRON CORPORATION 2003-11-06 US disclosed
WO-2003004488-A1 INDAZOLE BENZIMIDAZOLE COMPOUNDS AS TYROSINE AND SERINE/THREONINE KINASE INHIBITORS CHIRON CORPORATION (US) 2003-01-16 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20060079564-A1 Indazole benzimidazole compounds ABL1, ABL2, ALK TRIM24 660/4885TRIM33 818/4885KMT2A 1429/4885
US-20030207883-A1 Indazole benzimidazole compounds SLCO1B3, SLCO1B1, SLCO4C1 TRIM24 778/4885TRIM33 649/4885KMT2A 3144/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.