SCHEMBL3597087

SCHEMBL3597087

Cc1ccc(-c2ccc3ccn(CC(=O)NCCN4CCCC5CCCC=C54)c3c2)cc1

nearest known ligand 0.40

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
▸ GRIN2B Q13224 4/20 0.40
▸ KDM4E B2RXH2 5/20 0.39
▸ ALDH1A1 P00352 3/20 0.39
▸ HPGD P15428 2/20 0.39
▸ CYP3A4 P08684 2/20 0.39
▸ CYP2C19 P33261 2/20 0.39
▸ LMNA P02545 2/20 0.39
▸ NPC1 O15118 1/20 0.39
▸ KMT2A Q03164 1/20 0.39
▸ CYP2C9 P11712 1/20 0.39
▸ NPSR1 Q6W5P4 1/20 0.39
▸ RXFP1 Q9HBX9 1/20 0.39
▸ MTNR1A P48039 5/20 0.38
▸ MTNR1B P49286 5/20 0.38
▸ HSD17B10 Q99714 5/20 0.37
▸ TSHR P16473 4/20 0.37
▸ USP2 O75604 1/20 0.37
▸ POLB P06746 1/20 0.37
▸ CYP2D6 P10635 1/20 0.35
▸ TP53 P04637 1/20 0.34

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL3607170 0.81 KDM4E (0.51) GRIN2BKDM4EALDH1A1HPGDCYP3A4
SCHEMBL3602569 0.81 KMT2A (0.48) GRIN2BKDM4EALDH1A1HPGDCYP3A4
SCHEMBL3597719 0.81 KMT2A (0.48) GRIN2BKDM4EALDH1A1HPGDCYP3A4
SCHEMBL3604427 0.80 GRIN2B (0.45) GRIN2BKDM4EALDH1A1HPGDCYP3A4
SCHEMBL3605190 0.80 KMT2A (0.49) GRIN2BKDM4EALDH1A1HPGDCYP3A4
SCHEMBL3595366 0.80 DRD3 (0.41) GRIN2BKDM4EALDH1A1HPGDHSD17B10
SCHEMBL13115610 0.79 KDM4E (0.46) GRIN2BKDM4EALDH1A1HPGDCYP3A4
SCHEMBL3597085 0.79 KDM4E (0.46) GRIN2BKDM4EALDH1A1HPGDCYP3A4
SCHEMBL3597083 0.79 KDM4E (0.46) GRIN2BKDM4EALDH1A1HPGDCYP3A4
SCHEMBL3600661 0.78 KDM4E (0.55) GRIN2BKDM4EALDH1A1HPGDCYP3A4

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 3 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7807704-B2 Bicyclic, nitrogen-containing compounds modulating CXCR4 and/or CCXCKR2 CHEMOCENTRYX, INC. (US) 2010-10-05 — — US disclosed
US-20070275965-A1 CXCR4 modulators CHEMOCENTRYX, INC. (US) 2007-11-29 — — US disclosed
WO-2007115231-A2 CXCR4 MODULATORS CHEMOCENTRYX, INC. (US) 2007-10-11 — — WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20070275965-A1 CXCR4 modulators CXCL12, CXCR4, CXCR1 GRIN2B 2950/4885KDM4E 4801/4885ALDH1A1 662/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

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