SCHEMBL4308807

SCHEMBL4308807

CN(C)c1ccc(CNCCCCNC(=O)CCCCC(=O)NO)cc1

nearest known ligand 0.85

Predicted protein targets (top 13)

geneUniProtsupporting neighboursconfidence
HDAC1 Q13547 20/20 0.85
HDAC2 Q92769 19/20 0.85
HDAC8 Q9BY41 19/20 0.85
HDAC3 O15379 18/20 0.85
HDAC10 Q969S8 17/20 0.85
HDAC6 Q9UBN7 17/20 0.85
HDAC4 P56524 16/20 0.85
HDAC7 Q8WUI4 16/20 0.85
HDAC11 Q96DB2 16/20 0.85
HDAC9 Q9UKV0 16/20 0.85
HDAC5 Q9UQL6 16/20 0.85
LTA4H P09960 1/20 0.63
NCOR2 Q9Y618 1/20 0.60

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL13784484 0.99 HDAC1 (0.85) HDAC1HDAC2HDAC8HDAC3HDAC10
SCHEMBL8251956 0.86 HDAC1 (0.68) HDAC1HDAC2HDAC8HDAC3HDAC10
SCHEMBL1366029 0.86 HDAC1 (1.00) HDAC1HDAC2HDAC8HDAC3HDAC10
SCHEMBL4310507 0.85 HDAC3 (1.00) HDAC1HDAC2HDAC8HDAC3HDAC10
SCHEMBL1363636 0.85 HDAC1 (1.00) HDAC1HDAC2HDAC8HDAC3HDAC10
SCHEMBL1364463 0.85 HDAC1 (1.00) HDAC1HDAC2HDAC8HDAC3HDAC10
SCHEMBL8295721 0.85 HDAC1 (1.00) HDAC1HDAC2HDAC8HDAC3HDAC10
SCHEMBL4306898 0.84 HDAC3 (1.00) HDAC1HDAC2HDAC8HDAC3HDAC10
SCHEMBL1233055 0.84 HDAC1 (0.80) HDAC1HDAC2HDAC8HDAC3HDAC10
SCHEMBL1364916 0.82 HDAC1 (0.92) HDAC1HDAC2HDAC8HDAC3HDAC10

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 2 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20090182019-A1 Histone deacetylase inhibitors THE JOHNS HOPKINS UNIVERSITY (US) 2009-07-16 US disclosed
US-20090182019-A1 Histone deacetylase inhibitors THE JOHNS HOPKINS UNIVERSITY (US) 2009-07-16 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20090182019-A1 Histone deacetylase inhibitors HDAC1, HDAC2, HDAC3 HDAC1 1/4885HDAC2 2/4885HDAC8 8/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.