Gabapentin

Gabapentin

SCHEMBL7071213

Cc1cc(C)cc(C2=C(C(=O)O)N(c3ccccc3C(F)(F)F)S(=O)(=O)c3ccccc32)c1.NCC1(CC(=O)O)CCCCC1

nearest known ligand 0.56

Full drug profile on Sugi Atlas →

Known targets — ChEMBL curated mechanism

CACNA1ACACNA1BCACNA1CCACNA1DCACNA1ECACNA1FCACNA1GCACNA1HCACNA1ICACNA1SCACNA2D1CACNA2D2CACNA2D3CACNA2D4CACNB1CACNB2CACNB3CACNB4CACNG1CACNG2CACNG3CACNG4CACNG5CACNG6CACNG7CACNG8

The experimentally established mechanism targets of Gabapentin. The predicted profile below is derived independently by chemical similarity — agreement is a validation signal, a miss is honest.

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
CACNA2D1 known ✓ P54289 1/20 0.34
EDNRA P25101 1/20 0.56
USP2 O75604 1/20 0.34
ALDH1A1 P00352 1/20 0.34
LMNA P02545 1/20 0.34
CYP1A2 P05177 1/20 0.34
TSHR P16473 1/20 0.34
BLM P54132 1/20 0.34
SMN1; SMN2 Q16637 1/20 0.34
HTR1A P08908 1/20 0.32
DRD2 P14416 1/20 0.32
HTR2A P28223 1/20 0.32
HTR7 P34969 1/20 0.32
HTR6 P50406 1/20 0.32
RBP4 P02753 2/20 0.31
TTR P02766 1/20 0.31
KMT2A Q03164 1/20 0.31
TP53 P04637 1/20 0.31
MAPT P10636 1/20 0.31
ELANE P08246 1/20 0.30

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL6541145 0.86 EDNRA (0.66) EDNRALMNAHTR1ADRD2HTR2A
SCHEMBL6541319 0.76 EDNRA (0.54) EDNRARBP4TP53MAPTELANE
SCHEMBL6542066 0.74 EDNRA (0.63) EDNRAALDH1A1CYP1A2TP53MAPT
SCHEMBL6542075 0.72 EDNRA (0.49) EDNRALMNAHTR1ADRD2HTR2A
SCHEMBL6541905 0.72 EDNRA (0.78) EDNRAALDH1A1LMNASMN1; SMN2TP53
Fandosentan SCHEMBL29388301 0.72 EDNRA (1.00) EDNRAALDH1A1LMNASMN1; SMN2HTR1A
Fandosentan SCHEMBL795805 0.72 EDNRA (1.00) EDNRAALDH1A1LMNASMN1; SMN2HTR1A
Fandosentan SCHEMBL6541919 0.71 EDNRA (0.98) EDNRAALDH1A1LMNASMN1; SMN2HTR1A
Fandosentan SCHEMBL7547479 0.71 EDNRA (0.98) EDNRAALDH1A1LMNASMN1; SMN2HTR1A
SCHEMBL6541350 0.69 EDNRA (0.79) EDNRAALDH1A1LMNAKMT2AMAPT

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 1 patent. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20030232787-A1 Combinations of an endothelin receptor antagonist and an antiepileptic compound having pain alleviating properties or analgesic DOOLEY DAVID JAMES (US) 2003-12-18 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20030232787-A1 Combinations of an endothelin receptor antagonist and an antiepileptic compound having pain alleviating properties or analgesic EDNRA, EDNRB, ECE1 CACNA2D1 93/4885EDNRA 1/4885USP2 4385/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.