Benign/Likely benign
Multiple submitters
Classification
Benign/Likely benign
ClinVar
Review
Multiple submitters ★★☆☆
ClinVar · 5 submitters
gnomAD v4.1
Rare
rare (popmax 0.67%, afr)
Conditions
1
orthostatic hypotension 1
Computational evidence
| Protein change | ||
| Missense predictors do not apply to this variant type; conservation carries the signal. | ||
| Splicing | ||
| SpliceAI | <0.2 | all four deltas below 0.2 · C>G here scores Δ0.26 · evaluated, not missing |
|---|---|---|
| Constraint at this position | ||
| Conservation | phyloP 0.71 | GERP 1.3, phastCons 1 |
| Overall | ||
| CADD | 8.748 | PHRED · no single calibrated threshold — expert panels disagree |
Population frequency
gnomAD v4.1 · exomes + genomes
Grpmax group
0.67%
African / African-American · 503/75,052 alleles
Filtering AF
0.622%
ClinGen BA1/BS1 input
FAF95, joint · FAF99 0.603%
Overall
0.0445%
719/1,614,024 alleles · rare
| Ancestry group | Frequency | 1 in |
|---|---|---|
| African / African-Americangrpmax | 0.67% | 149 |
| Admixed American | 0.0899% | 1,112 |
| Middle Eastern | 0.0825% | 1,212 |
| Remaining individualsnot grpmax-eligible | 0.0784% | 1,276 |
| European (non-Finnish) | 0.00915% | 10,925 |
Rarity supports pathogenicity (ACMG PM2); frequency above a disease-specific BA1/BS1 threshold argues against it. A variant frequent in one ancestry group can be near-absent in others, so a single global figure can mislead.
Variant & gene context
- Gene
- DBH
- Protein
- p.Tyr311=
- Coding
- c.933C>T
- MANE Select
- NM_000787
- dbSNP
- rs3025400
- Type
- single nucleotide variant
- Location
- chr9:133644229 (GRCh38)
- Gene constraint
- LOEUF 0.936 · pLI <0.01 · ClinGen HI gene assoc. with recessive phenotype (gnomAD)
- Structure
- AlphaFold pLDDT 90.58 · 1 PDB
- Residue 311
- a disulfide bond
Disease context
orthostatic hypotension 1 — disease report on Sugi Atlas → Associated genes, phenotypes, clinical trials & treatmentsFor Dopamine beta-hydroxylase deficiency (Orphanet):
- Inheritance
- Autosomal recessive
- Onset
- Adolescent, Adult, Childhood, Infancy, Neonatal
Similar variants
- DBH p.Tyr311Cys Uncertain significance ★★ ⚠ same residue
- DBH c.339+2T>C Pathogenic ★★ same condition
- DBH c.1024+6C>T Uncertain significance ★★ same condition
- DBH c.486+15C>T Uncertain significance ★★ same condition
- DBH c.*393C>T Uncertain significance ★★ same condition
- DBH p.Ala113Ser Uncertain significance ★★ ⚠ same condition
- DBH p.Ala259Val Uncertain significance ★★ ⚠ same condition
- DBH p.Ala383Val Uncertain significance ★★ ⚠ same condition
Built on 18 open, versioned datasets — ClinVar, gnomAD, AlphaMissense, REVEL, ClinGen & more — plus Sugi Variant's own cross-source analysis. Source data 2026-01–2026-10, ClinVar 2026-10. Full sources & versions →
Cite Sugi Variant
Gür T. Sugi Variant: A Deterministic Per-Variant Germline Reference from a Knowledge Graph for Humans and AI Agents. 2026. doi:10.5281/zenodo.21509445. This variant: https://sugi.bio/variant/dbh-p-tyr311 (accessed [today's date]).
Preprint & method: sugi.bio/variant/method Machine-readable: this page as Markdown