DCT p.Trp71Ter
c.212G>A · rs758102115 · VCV3233659
Computational evidence
| Protein change | ||
| Missense predictors do not apply to this variant type; conservation carries the signal. | ||
| Consequence | nonsense (stop-gain) | predicted loss-of-function |
|---|---|---|
| NMD | predicted | premature termination codon in exon 1 of 8 |
| Splicing | ||
| SpliceAI | — | not assessed · no allele here is in the release |
| Constraint at this position | ||
| Conservation | phyloP 7.7 | GERP 1.7, phastCons 1 |
| Overall | ||
| CADD | 40.0 | PHRED · no single calibrated threshold — expert panels disagree |
Predicted loss-of-function is descriptive, not an applied PVS1 code.
Population frequency
| Ancestry group | Frequency | 1 in |
|---|---|---|
| Admixed Americangrpmax | 0.005% | 20,003 |
| East Asian | 0.00223% | 44,894 |
| European (non-Finnish) | 0.000508% | 196,676 |
Rarity supports pathogenicity (ACMG PM2); frequency above a disease-specific BA1/BS1 threshold argues against it. A variant frequent in one ancestry group can be near-absent in others, so a single global figure can mislead.
Variant & gene context
- Gene
- DCT
- Protein
- p.Trp71Ter
- Coding
- c.212G>A
- MANE Select
- NM_001922
- dbSNP
- rs758102115
- Type
- single nucleotide variant
- Location
- chr13:94479044 (GRCh38)
- Gene constraint
- LOEUF 1.101 · pLI <0.01 (gnomAD)
- Structure
- AlphaFold pLDDT 89.33 · 1 PDB
Disease context
oculocutaneous albinism type 8 — disease report on Sugi Atlas → Associated genes, phenotypes, clinical trials & treatmentsFor Oculocutaneous albinism type 8 (Orphanet):
- Inheritance
- Autosomal recessive
- Onset
- Childhood
- Prevalence
- <1 / 1 000 000 (Worldwide)
Similar variants
- DCT p.Arg233Ter Pathogenic/Likely pathogenic ★★ same condition
- DCT p.Arg326Ter Pathogenic ★ same condition
- DCT p.Gly213Glu Uncertain significance ★ ⚠ same condition
- DCT p.Ser34Arg Uncertain significance ★ ⚠ same condition
- DCT p.Val285Leu Likely benign ★ ⚠ same condition
- DCT p.Cys40Ser Pathogenic/Likely pathogenic same condition
- DCT p.Cys61Trp Pathogenic/Likely pathogenic same condition
- DCT p.Gly59Val Pathogenic same condition
Built on 18 open, versioned datasets — ClinVar, gnomAD, AlphaMissense, REVEL, ClinGen & more — plus Sugi Variant's own cross-source analysis. Source data 2026-01–2026-10, ClinVar 2026-10. Full sources & versions →
Cite Sugi Variant
Gür T. Sugi Variant: A Deterministic Per-Variant Germline Reference from a Knowledge Graph for Humans and AI Agents. 2026. doi:10.5281/zenodo.21509445. This variant: https://sugi.bio/variant/dct-p-trp71ter (accessed [today's date]).
Preprint & method: sugi.bio/variant/method Machine-readable: this page as Markdown