DIP2C p.Asp1115fs
c.3323_3341dup · rs2540549307 · VCV2120391
Computational evidence
| Protein change | ||
| Missense predictors do not apply to this variant type; conservation carries the signal. | ||
| Consequence | frameshift | predicted loss-of-function in a LoF-intolerant gene |
|---|---|---|
| NMD | predicted | premature termination codon in exon 27 of 37 |
| Splicing | ||
| SpliceAI | — | not assessed · substitutions only |
| Constraint at this position | ||
| Conservation | phyloP 5 | GERP 0.64, phastCons 1 |
Predicted loss-of-function is descriptive, not an applied PVS1 code.
Population frequency
No gnomAD frequency available for this variant. This is missing data, not an absence: the variant may or may not be present in gnomAD. Rarity (ACMG PM2) and BA1/BS1 cannot be assessed for it.
Variant & gene context
- Gene
- DIP2C
- Protein
- p.Asp1115fs
- Coding
- c.3323_3341dup
- MANE Select
- NM_014974
- dbSNP
- rs2540549307
- Type
- Duplication
- Location
- chr10:345000 (GRCh38)
- Gene constraint
- LOEUF 0.235 · pLI 1.00 (gnomAD)
- Structure
- AlphaFold pLDDT 79.64
Similar variants
- DIP2C c.1756+1dup Likely pathogenic ★ same type
- DIP2C p.Arg383fs Pathogenic ★ same type
- DIP2C p.Ser800fs Pathogenic ★ same type
- DIP2C p.Ser80fs Pathogenic ★ same type
- DIP2C p.Thr1317fs Likely pathogenic ★ same type
- DIP2C p.Val1318fs Likely pathogenic ★ same type
- DIP2C c.3453+4dup Uncertain significance ★ same type
- DIP2C c.4045-2dup Uncertain significance ★ same type
Built on 18 open, versioned datasets — ClinVar, gnomAD, AlphaMissense, REVEL, ClinGen & more — plus Sugi Variant's own cross-source analysis. Source data 2026-01–2026-10, ClinVar 2026-10. Full sources & versions →
Cite Sugi Variant
Gür T. Sugi Variant: A Deterministic Per-Variant Germline Reference from a Knowledge Graph for Humans and AI Agents. 2026. doi:10.5281/zenodo.21509445. This variant: https://sugi.bio/variant/dip2c-p-asp1115fs (accessed [today's date]).
Preprint & method: sugi.bio/variant/method Machine-readable: this page as Markdown