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DMD p.Gly95Val

c.284G>T · rs1381812538 · VCV455887

Uncertain significance Multiple submitters
Classification
Uncertain significance
ClinVar
Review
Multiple submitters ★★☆☆
ClinVar · 4 submitters
AlphaMissense
likely pathogenic
0.7722 · ACMG-weighted
gnomAD v4.1
Rare
very rare (popmax 0.00135%, nfe)
Missense predictors
2/2 damaging
AlphaMissense, REVEL
Conditions
3
Duchenne muscular dystrophy

Computational evidence

Protein change
AlphaMissense0.7722likely pathogenic
REVEL0.948strongly pathogenic-leaning
⇒ AlphaMissense and REVEL both call this damaging.
Splicing
SpliceAI—not assessed · no allele here is in the release
Constraint at this position
ConservationphyloP 6GERP 2.4, phastCons 1
Regional constrainto/e 1.36unconstrained · MANE · 1,863 kb · p 2.4e-62 · regional, not allelic
Overall
CADD31.0PHRED · no single calibrated threshold — expert panels disagree

ClinVar classifies this uncertain; the computational predictors unanimously lean damaging — a triage signal, not a reclassification

AlphaMissense carries the ACMG weight for missense; REVEL and SaProt are independent agreement signals.

Population frequency

gnomAD v4.1 · exomes + genomes
Grpmax group 0.00135% European (non-Finnish) · 12/889,346 alleles
Filtering AF 0.000719% ClinGen BA1/BS1 input FAF95, joint · FAF99 0.000568%
Overall 0.000998% 12/1,202,862 alleles · very rare

Rarity supports pathogenicity (ACMG PM2); frequency above a disease-specific BA1/BS1 threshold argues against it. A variant frequent in one ancestry group can be near-absent in others, so a single global figure can mislead.

Variant & gene context

Gene
DMD
Protein
p.Gly95Val
Coding
c.284G>T
MANE Select
NM_004006
dbSNP
rs1381812538
Type
single nucleotide variant
Location
chrX:32823368 (GRCh38)
Residue 95
the calponin-homology (ch) 1 domain; the 'actin-binding' region
Full DMD gene report on Sugi Atlas → Gene function, pathways, protein structure, interactions & more

Disease context

Duchenne muscular dystrophy — disease report on Sugi Atlas → Associated genes, phenotypes, clinical trials & treatments

Also linked: cardiomyopathyBecker muscular dystrophy

For Duchenne muscular dystrophy (Orphanet):

Inheritance
X-linked recessive
Onset
Childhood
Prevalence
1-9 / 100 000 (Worldwide)

Similar variants

Built on 18 open, versioned datasets — ClinVar, gnomAD, AlphaMissense, REVEL, ClinGen & more — plus Sugi Variant's own cross-source analysis. Source data 2026-01–2026-10, ClinVar 2026-10. Full sources & versions →

Cite Sugi Variant

Gür T. Sugi Variant: A Deterministic Per-Variant Germline Reference from a Knowledge Graph for Humans and AI Agents. 2026. doi:10.5281/zenodo.21509445. This variant: https://sugi.bio/variant/dmd-p-gly95val (accessed [today's date]).

Preprint & method: sugi.bio/variant/method Machine-readable: this page as Markdown