Benign
Multiple submitters
Classification
Benign
ClinVar
Review
Multiple submitters ★★☆☆
ClinVar · 3 submitters
gnomAD v4.1
Common
common (popmax 6.44%, afr) — too common for a highly-penetrant pathogenic allele
Conditions
1
dystonic disorder
Computational evidence
| Protein change | ||
| Missense predictors do not apply to this variant type; conservation carries the signal. | ||
| Splicing | ||
| SpliceAI | — | not assessed · no allele here is in the release |
|---|---|---|
| Constraint at this position | ||
| Conservation | phyloP 5.8 | GERP 1.8, phastCons 1 |
| Overall | ||
| CADD | 7.846 | PHRED · no single calibrated threshold — expert panels disagree |
Population frequency
gnomAD v4.1 · exomes + genomes
Grpmax group
6.44%
African / African-American · 4,832/75,058 alleles
Filtering AF
6.29%
ClinGen BA1/BS1 input
FAF95, joint · FAF99 6.22%
Overall
0.343%
5,542/1,614,256 alleles · common
| Ancestry group | Frequency | 1 in |
|---|---|---|
| African / African-Americangrpmax | 6.44% | 16 |
| Remaining individualsnot grpmax-eligible | 0.382% | 262 |
| Admixed American | 0.381% | 262 |
| Middle Eastern | 0.33% | 303 |
| South Asian | 0.0176% | 5,693 |
| European (non-Finnish) | 0.0175% | 5,728 |
Rarity supports pathogenicity (ACMG PM2); frequency above a disease-specific BA1/BS1 threshold argues against it. A variant frequent in one ancestry group can be near-absent in others, so a single global figure can mislead.
Variant & gene context
- Gene
- DRD2
- Protein
- p.Leu44=
- Coding
- c.132C>T
- MANE Select
- NM_000795
- dbSNP
- rs4986918
- Type
- single nucleotide variant
- Location
- chr11:113424520 (GRCh38)
- Gene constraint
- LOEUF 0.372 · pLI 1.00 (gnomAD)
- Structure
- AlphaFold pLDDT 72.49 · 11 PDB
- Residue 44
- an α-helix
Similar variants
- DRD2 p.Arg274Gln Uncertain significance ★★ ⚠ same condition
- DRD2 p.Gln366Lys Uncertain significance ★★ ⚠ same condition
- DRD2 p.Glu99Lys Uncertain significance ★★ ⚠ same condition
- DRD2 p.Gly261Arg Uncertain significance ★★ ⚠ same condition
- DRD2 p.His316Pro Uncertain significance ★★ ⚠ same condition
- DRD2 p.Ile431Thr Uncertain significance ★★ ⚠ same condition
- DRD2 p.Pro300His Uncertain significance ★★ ⚠ same condition
- DRD2 c.1139-653A>C Benign ★★ same condition
Built on 18 open, versioned datasets — ClinVar, gnomAD, AlphaMissense, REVEL, ClinGen & more — plus Sugi Variant's own cross-source analysis. Source data 2026-01–2026-10, ClinVar 2026-10. Full sources & versions →
Cite Sugi Variant
Gür T. Sugi Variant: A Deterministic Per-Variant Germline Reference from a Knowledge Graph for Humans and AI Agents. 2026. doi:10.5281/zenodo.21509445. This variant: https://sugi.bio/variant/drd2-p-leu44 (accessed [today's date]).
Preprint & method: sugi.bio/variant/method Machine-readable: this page as Markdown