Send feedback

F11 p.Ter626=

c.*1del · rs2126791848 · VCV1587980

Likely benign Single submitter
Classification
Likely benign
ClinVar
Review
Single submitter ★☆☆☆
ClinVar · 1 submitter
Consequence
stop-loss
predicted LoF
gnomAD v4.1
Not reported
no gnomAD frequency available for this variant

Computational evidence

Protein change
Missense predictors do not apply to this variant type; conservation carries the signal.
Consequencestop-losspredicted loss-of-function
Splicing
SpliceAI—not assessed · substitutions only
Constraint at this position
ConservationphyloP 2.6GERP -0.76, phastCons 1

Predicted loss-of-function is descriptive, not an applied PVS1 code.

Population frequency

dbSNP / gnomAD

No gnomAD frequency available for this variant. This is missing data, not an absence: the variant may or may not be present in gnomAD. Rarity (ACMG PM2) and BA1/BS1 cannot be assessed for it.

Variant & gene context

Gene
F11
Protein
p.Ter626=
Coding
c.*1del
MANE Select
NM_000128
dbSNP
rs2126791848
Type
Deletion
Location
chr4:186288614 (GRCh38)
Gene constraint
LOEUF 1.145 · pLI <0.01 (gnomAD)
Structure
AlphaFold pLDDT 86.94 · 117 PDB
Full F11 gene report on Sugi Atlas → Gene function, pathways, protein structure, interactions & more

Similar variants

Built on 18 open, versioned datasets — ClinVar, gnomAD, AlphaMissense, REVEL, ClinGen & more — plus Sugi Variant's own cross-source analysis. Source data 2026-01–2026-10, ClinVar 2026-10. Full sources & versions →

Cite Sugi Variant

Gür T. Sugi Variant: A Deterministic Per-Variant Germline Reference from a Knowledge Graph for Humans and AI Agents. 2026. doi:10.5281/zenodo.21509445. This variant: https://sugi.bio/variant/f11-p-ter626 (accessed [today's date]).

Preprint & method: sugi.bio/variant/method Machine-readable: this page as Markdown