FLCN p.Pro326fs
c.977del · VCV4294224
Pathogenic
Single submitter
Classification
Pathogenic
ClinVar
Review
Single submitter ★☆☆☆
ClinVar · 1 submitter
Consequence
frameshift
predicted LoF
gnomAD v4.1
Rare
Conditions
1
Birt-Hogg-Dube syndrome 1
Computational evidence
| Protein change | ||
| Missense predictors do not apply to this variant type; conservation carries the signal. | ||
| Consequence | frameshift | predicted loss-of-function in a haploinsufficient gene (ClinGen) |
|---|---|---|
| NMD | predicted | premature termination codon in exon 9 of 14 |
| Splicing | ||
| SpliceAI | — | not assessed · substitutions only |
| Constraint at this position | ||
| Conservation | phyloP -20 | GERP -3.9 |
Predicted loss-of-function is descriptive, not an applied PVS1 code.
Variant & gene context
- Gene
- FLCN
- Protein
- p.Pro326fs
- Coding
- c.977del
- MANE Select
- NM_144997
- Type
- Deletion
- Location
- chr17:17219104 (GRCh38)
- Gene constraint
- LOEUF 0.487 · pLI 0.99 · ClinGen HI 3/3 (gnomAD)
- Structure
- AlphaFold pLDDT 79.14 · 4 PDB
- Residue 326
- a UniProt-annotated variant site (in psp); a UniProt-annotated variant site (in bhd1); the 'disordered' region
Similar variants
- FLCN p.Pro326= Benign/Likely benign ★★ same residue
- FLCN p.Pro326Leu Conflicting classifications of pathogenicity ★ ⚠ same residue
- FLCN c.1301-7_1304del Likely pathogenic ★★ same condition
- FLCN p.Ala64fs Pathogenic/Likely pathogenic ★★ same condition
- FLCN p.Asp99fs Pathogenic ★★ same condition
- FLCN p.Gly195fs Pathogenic ★★ same condition
- FLCN p.Gly453fs Pathogenic/Likely pathogenic ★★ same condition
- FLCN p.Phe152fs Pathogenic ★★ same condition
Built on 18 open, versioned datasets — ClinVar, gnomAD, AlphaMissense, REVEL, ClinGen & more — plus Sugi Variant's own cross-source analysis. Source data 2026-01–2026-10, ClinVar 2026-10. Full sources & versions →
Cite Sugi Variant
Gür T. Sugi Variant: A Deterministic Per-Variant Germline Reference from a Knowledge Graph for Humans and AI Agents. 2026. doi:10.5281/zenodo.21509445. This variant: https://sugi.bio/variant/flcn-p-pro326fs (accessed [today's date]).
Preprint & method: sugi.bio/variant/method Machine-readable: this page as Markdown