ABHD16A — 97 ClinVar variants
All ClinVar germline ABHD16A variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 65 flagged for review →
5 Pathogenic · 3 Likely pathogenic · 2 Conflicting · 1 Benign · 17 Likely benign · 69 Uncertain significance
Full ABHD16A gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 65
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 1
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
-
ABHD16A p.Ile485Val
Conflicting
Single submitter
Inborn genetic diseases
Predictors lean, ClinVar uncertain 57
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
ABHD16A p.Tyr87Cys
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
ABHD16A p.Val8Ile
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
ABHD16A p.Ala412Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Ala412Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Ala78Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg118Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg118His
Uncertain significance
Single submitter
Spastic paraplegia
-
ABHD16A p.Arg125Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg125Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg136Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg154Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg199Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg218Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg219Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg24Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg251Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg252Gln
Uncertain significance
Single submitter
Spastic paraplegia
- ABHD16A p.Arg252Trp Uncertain significance Single submitter
-
ABHD16A p.Arg445Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg445Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg533Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Asn121Ile
Uncertain significance
Single submitter
Spastic paraplegia
-
ABHD16A p.Asn142Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Asp45Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Asp510Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Cys248Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Cys7Arg
Uncertain significance
Single submitter
neurodevelopmental disorder
-
ABHD16A p.Gln123Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Gln206Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Glu19Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Glu506Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Gly287Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Gly357Ala
Uncertain significance
Single submitter
spastic paraplegia 86, autosomal recessive
-
ABHD16A p.His312Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.His557Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Leu188Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Leu308Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Leu383Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Leu409Arg
Uncertain significance
Single submitter
Spastic paraplegia
-
ABHD16A p.Lys55Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Met331Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Phe127Leu
Uncertain significance
Single submitter
Inborn genetic diseases
- ABHD16A p.Phe151Ser Uncertain significance Single submitter
-
ABHD16A p.Pro175Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Pro26Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Pro392Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Pro392Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Pro546Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Ser520Asn
Uncertain significance
Single submitter
Inborn genetic diseases
- ABHD16A p.Thr215Ala Uncertain significance Single submitter
-
ABHD16A p.Thr319Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Thr360Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Trp489Arg
Uncertain significance
Single submitter
ABHD16A-related disorder
-
ABHD16A p.Val180Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Val200Leu
Uncertain significance
Single submitter
Inborn genetic diseases
- ABHD16A p.Val333Met Uncertain significance Single submitter
-
ABHD16A p.Val461Leu
Uncertain significance
Single submitter
Inborn genetic diseases
Predictors split 7
The independent predictors disagree with each other — read with care.
-
ABHD16A p.Ala541Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg136Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg460Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg501Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Arg525Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Gly317Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
ABHD16A p.Phe153Leu
Uncertain significance
Single submitter
Inborn genetic diseases
All ABHD16A variants
Pathogenic 5
- p.Arg172Ter Multiple submitters spastic paraplegia 86, autosomal recessive
- p.Arg468Ter Single submitter spastic paraplegia 86, autosomal recessive
- p.Arg114Ter No assertion criteria spastic paraplegia 86, autosomal recessive
- p.Arg457Gln No assertion criteria spastic paraplegia 86, autosomal recessive
- p.Gln279Ter No assertion criteria spastic paraplegia 86, autosomal recessive
Likely pathogenic 3
- c.1307+1G>A Single submitter spastic paraplegia 86, autosomal recessive
- p.Trp513Ter Single submitter spastic paraplegia 86, autosomal recessive
- p.Tyr486fs Single submitter Autosomal recessive complex spastic paraplegia
Conflicting classifications of pathogenicity 2
- p.Arg445Ter Single submitter spastic paraplegia 86, autosomal recessive
- p.Ile485Val Single submitter Inborn genetic diseases ⚠
Benign 1
- p.Ala412= Single submitter
Likely benign 17
- p.Ala213= Multiple submitters
- c.1307+8_1307+11dup Single submitter
- c.132+383T>C Single submitter
- c.343+20G>T Single submitter
- c.503+11A>T Single submitter
- c.844-17dup Single submitter
- c.844-4C>T Single submitter
- p.Arg178Gln Single submitter Inborn genetic diseases
- p.Arg178Trp Single submitter Inborn genetic diseases
- p.Arg184Leu Single submitter
- p.Arg525Gln Single submitter Inborn genetic diseases
- p.Asn411= Single submitter
- p.Gly397= Single submitter
- p.Thr195Asn Single submitter Inborn genetic diseases
- p.Thr34Ala Single submitter Inborn genetic diseases
- p.Arg190Trp No assertion criteria ABHD16A-related disorder
- p.Val29Leu No assertion criteria ABHD16A-related disorder
Uncertain significance 69
- p.Tyr87Cys Multiple submitters Inborn genetic diseases ⚠
- p.Val8Ile Multiple submitters Inborn genetic diseases ⚠
- c.1448-1G>A Single submitter spastic paraplegia 86, autosomal recessive
- c.1448-4C>G Single submitter Inborn genetic diseases
- p.Ala412Thr Single submitter Inborn genetic diseases ⚠
- p.Ala412Val Single submitter Inborn genetic diseases ⚠
- p.Ala541Asp Single submitter Inborn genetic diseases ⚠
- p.Ala78Val Single submitter Inborn genetic diseases ⚠
- p.Arg118Cys Single submitter Inborn genetic diseases ⚠
- p.Arg118His Single submitter Spastic paraplegia ⚠
- p.Arg125Gln Single submitter Inborn genetic diseases ⚠
- p.Arg125Trp Single submitter Inborn genetic diseases ⚠
- p.Arg136Gln Single submitter Inborn genetic diseases ⚠
- p.Arg136Trp Single submitter Inborn genetic diseases ⚠
- p.Arg154Gln Single submitter Inborn genetic diseases ⚠
- p.Arg199Gly Single submitter Inborn genetic diseases ⚠
- p.Arg218Cys Single submitter Inborn genetic diseases ⚠
- p.Arg219Leu Single submitter Inborn genetic diseases ⚠
- p.Arg219Trp Single submitter Inborn genetic diseases
- p.Arg24Thr Single submitter Inborn genetic diseases ⚠
- p.Arg251Cys Single submitter Inborn genetic diseases ⚠
- p.Arg252Gln Single submitter Spastic paraplegia ⚠
- p.Arg252Trp Single submitter ⚠
- p.Arg445Gln Single submitter Inborn genetic diseases ⚠
- p.Arg445Gly Single submitter Inborn genetic diseases ⚠
- p.Arg460Trp Single submitter Inborn genetic diseases ⚠
- p.Arg501Cys Single submitter Inborn genetic diseases ⚠
- p.Arg525Trp Single submitter Inborn genetic diseases ⚠
- p.Arg533Trp Single submitter Inborn genetic diseases ⚠
- p.Asn121Ile Single submitter Spastic paraplegia ⚠
- p.Asn142Lys Single submitter Inborn genetic diseases ⚠
- p.Asp45Gly Single submitter Inborn genetic diseases ⚠
- p.Asp510Asn Single submitter Inborn genetic diseases ⚠
- p.Cys248Ser Single submitter Inborn genetic diseases ⚠
- p.Cys7Arg Single submitter neurodevelopmental disorder ⚠
- p.Gln123Leu Single submitter Inborn genetic diseases ⚠
- p.Gln206Glu Single submitter Inborn genetic diseases ⚠
- p.Glu19Lys Single submitter Inborn genetic diseases ⚠
- p.Glu506Gly Single submitter Inborn genetic diseases ⚠
- p.Gly287Glu Single submitter Inborn genetic diseases ⚠
- p.Gly317Arg Single submitter Inborn genetic diseases ⚠
- p.Gly357Ala Single submitter spastic paraplegia 86, autosomal recessive ⚠
- p.His312Arg Single submitter Inborn genetic diseases ⚠
- p.His557Arg Single submitter Inborn genetic diseases ⚠
- p.Leu188Val Single submitter Inborn genetic diseases ⚠
- p.Leu308Pro Single submitter Inborn genetic diseases ⚠
- p.Leu383Val Single submitter Inborn genetic diseases ⚠
- p.Leu409Arg Single submitter Spastic paraplegia ⚠
- p.Lys55Arg Single submitter Inborn genetic diseases ⚠
- p.Met331Thr Single submitter Inborn genetic diseases ⚠
- p.Phe127Leu Single submitter Inborn genetic diseases ⚠
- p.Phe151Ser Single submitter ⚠
- p.Phe153Leu Single submitter Inborn genetic diseases ⚠
- p.Pro175Ser Single submitter Inborn genetic diseases ⚠
- p.Pro26Leu Single submitter Inborn genetic diseases ⚠
- p.Pro392Ala Single submitter Inborn genetic diseases ⚠
- p.Pro392Ser Single submitter Inborn genetic diseases ⚠
- p.Pro546Ser Single submitter Inborn genetic diseases ⚠
- p.Ser520Asn Single submitter Inborn genetic diseases ⚠
- p.Thr192fs Single submitter Spastic paraplegia
- p.Thr215Ala Single submitter ⚠
- p.Thr319Arg Single submitter Inborn genetic diseases ⚠
- p.Thr360Ser Single submitter Inborn genetic diseases ⚠
- p.Trp489Arg Single submitter ABHD16A-related disorder ⚠
- p.Val180Ala Single submitter Inborn genetic diseases ⚠
- p.Val200Leu Single submitter Inborn genetic diseases ⚠
- p.Val333Met Single submitter ⚠
- p.Val461Leu Single submitter Inborn genetic diseases ⚠
- p.Val515Ala Single submitter Inborn genetic diseases