ALDH4A1 — 360 ClinVar variants

All ClinVar germline ALDH4A1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 130 flagged for review →

4 Pathogenic · 3 Pathogenic/Likely pathogenic · 18 Likely pathogenic · 31 Conflicting · 31 Benign · 6 Benign/Likely benign · 117 Likely benign · 150 Uncertain significance

Full ALDH4A1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 130

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 9

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 35

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 86

The independent predictors disagree with each other — read with care.

All ALDH4A1 variants

Pathogenic 4

Pathogenic/Likely pathogenic 3

  • c.866+1G>A Multiple submitters hyperprolinemia type 2
  • p.Arg47Ter Multiple submitters hyperprolinemia type 2
  • p.Gly521fs Multiple submitters hyperprolinemia type 2

Likely pathogenic 18

Conflicting classifications of pathogenicity 31

Benign 31

  • c.1338+39A>G Multiple submitters hyperprolinemia type 2
  • c.1579+49C>G Multiple submitters hyperprolinemia type 2
  • c.1580-22A>T Multiple submitters hyperprolinemia type 2
  • c.249+22A>G Multiple submitters hyperprolinemia type 2
  • c.250-17C>T Multiple submitters hyperprolinemia type 2
  • c.678+75T>C Multiple submitters hyperprolinemia type 2
  • c.941-48C>T Multiple submitters hyperprolinemia type 2
  • c.941-67T>C Multiple submitters hyperprolinemia type 2
  • c.*118G>A Multiple submitters hyperprolinemia type 2
  • c.*1198A>G Multiple submitters hyperprolinemia type 2
  • c.*1239G>C Multiple submitters hyperprolinemia type 2
  • c.*1275A>C Multiple submitters hyperprolinemia type 2
  • c.*444T>C Multiple submitters hyperprolinemia type 2
  • c.*502A>G Multiple submitters hyperprolinemia type 2
  • c.*702C>T Multiple submitters hyperprolinemia type 2
  • c.*712C>T Multiple submitters hyperprolinemia type 2
  • c.*763T>C Multiple submitters hyperprolinemia type 2
  • c.*921G>A Multiple submitters hyperprolinemia type 2
  • c.*925C>T Multiple submitters hyperprolinemia type 2
  • p.Ala350= Multiple submitters hyperprolinemia type 2
  • p.Ala407= Multiple submitters hyperprolinemia type 2
  • p.Ala417= Multiple submitters hyperprolinemia type 2
  • p.Asp460= Multiple submitters hyperprolinemia type 2
  • p.Gly516= Multiple submitters hyperprolinemia type 2
  • p.Ser410= Multiple submitters hyperprolinemia type 2
  • p.Thr473Ala Multiple submitters hyperprolinemia type 2 ⚠
  • p.Thr75= Multiple submitters hyperprolinemia type 2
  • p.Val470Ile Multiple submitters hyperprolinemia type 2
  • c.1461-109C>T Single submitter hyperprolinemia type 2
  • c.1461-137dup Single submitter hyperprolinemia type 2
  • p.Pro138= Single submitter hyperprolinemia type 2

Benign/Likely benign 6

Likely benign 117

Uncertain significance 150