ATAD1 — 207 ClinVar variants
All ClinVar germline ATAD1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 71 flagged for review →
1 Pathogenic · 2 Pathogenic/Likely pathogenic · 3 Benign · 1 Benign/Likely benign · 108 Likely benign · 92 Uncertain significance
Full ATAD1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 71
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors lean, ClinVar uncertain 49
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
ATAD1 p.Ala339Val
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
ATAD1 p.Ala55Thr
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
ATAD1 p.Arg338Gln
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
ATAD1 p.Asp164Asn
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
ATAD1 p.Glu290Lys
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
ATAD1 p.His227Asn
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
ATAD1 p.Ile41Val
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
ATAD1 p.Ser75Asn
Uncertain significance
Multiple submitters
Inborn genetic diseases
- ATAD1 p.Ala261Thr Uncertain significance Single submitter
- ATAD1 p.Ala349Val Uncertain significance Single submitter
-
ATAD1 p.Ala4Thr
Uncertain significance
Single submitter
Inborn genetic diseases
- ATAD1 p.Arg201His Uncertain significance Single submitter
- ATAD1 p.Arg239His Uncertain significance Single submitter
- ATAD1 p.Arg304Gln Uncertain significance Single submitter
- ATAD1 p.Arg329Trp Uncertain significance Single submitter
- ATAD1 p.Asp82Glu Uncertain significance Single submitter
- ATAD1 p.Gln124Arg Uncertain significance Single submitter
- ATAD1 p.Gln259His Uncertain significance Single submitter
- ATAD1 p.Gln352Arg Uncertain significance Single submitter
- ATAD1 p.Glu325Lys Uncertain significance Single submitter
- ATAD1 p.Ile182Leu Uncertain significance Single submitter
- ATAD1 p.Ile182Val Uncertain significance Single submitter
- ATAD1 p.Ile257Ser Uncertain significance Single submitter
- ATAD1 p.Ile25Thr Uncertain significance Single submitter
-
ATAD1 p.Ile272Phe
Uncertain significance
Single submitter
Inborn genetic diseases
- ATAD1 p.Ile340Leu Uncertain significance Single submitter
- ATAD1 p.Ile34Val Uncertain significance Single submitter
- ATAD1 p.Leu130Val Uncertain significance Single submitter
- ATAD1 p.Lys113Arg Uncertain significance Single submitter
- ATAD1 p.Lys139Glu Uncertain significance Single submitter
- ATAD1 p.Lys165Gln Uncertain significance Single submitter
- ATAD1 p.Met248Arg Uncertain significance Single submitter
- ATAD1 p.Met59Val Uncertain significance Single submitter
- ATAD1 p.Met74Val Uncertain significance Single submitter
- ATAD1 p.Met86Val Uncertain significance Single submitter
- ATAD1 p.Phe216Cys Uncertain significance Single submitter
- ATAD1 p.Phe255Leu Uncertain significance Single submitter
- ATAD1 p.Phe32Val Uncertain significance Single submitter
- ATAD1 p.Pro260Ala Uncertain significance Single submitter
- ATAD1 p.Ser75Thr Uncertain significance Single submitter
- ATAD1 p.Thr101Met Uncertain significance Single submitter
-
ATAD1 p.Thr140Ala
Uncertain significance
Single submitter
hyperekplexia 4
- ATAD1 p.Thr140Met Uncertain significance Single submitter
- ATAD1 p.Thr24Ala Uncertain significance Single submitter
- ATAD1 p.Thr318Ala Uncertain significance Single submitter
- ATAD1 p.Thr318Ile Uncertain significance Single submitter
-
ATAD1 p.Tyr132Cys
Uncertain significance
Single submitter
Inborn genetic diseases
- ATAD1 p.Val129Ala Uncertain significance Single submitter
- ATAD1 p.Val88Ala Uncertain significance Single submitter
Predictors split 22
The independent predictors disagree with each other — read with care.
-
ATAD1 p.Gln185Glu
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
ATAD1 p.Gln352Pro
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
ATAD1 p.Gln54Glu
Uncertain significance
Multiple submitters
hyperekplexia 4
-
ATAD1 p.His256Leu
Uncertain significance
Multiple submitters
hyperekplexia 4
-
ATAD1 p.Lys68Asn
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
ATAD1 p.Val287Ala
Uncertain significance
Multiple submitters
Inborn genetic diseases
- ATAD1 p.Ala40Val Uncertain significance Single submitter
- ATAD1 p.Arg153Gln Uncertain significance Single submitter
- ATAD1 p.Arg338Trp Uncertain significance Single submitter
- ATAD1 p.Arg9His Uncertain significance Single submitter
- ATAD1 p.Asp224Gly Uncertain significance Single submitter
-
ATAD1 p.Asp324Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
- ATAD1 p.Asp92Asn Uncertain significance Single submitter
-
ATAD1 p.Gln54His
Uncertain significance
Single submitter
hyperekplexia 4
- ATAD1 p.Glu341Gly Uncertain significance Single submitter
- ATAD1 p.Gly151Asp Uncertain significance Single submitter
- ATAD1 p.His281Pro Uncertain significance Single submitter
- ATAD1 p.Ile155Val Uncertain significance Single submitter
- ATAD1 p.Lys35Arg Uncertain significance Single submitter
-
ATAD1 p.Met37Leu
Uncertain significance
Single submitter
Inborn genetic diseases
- ATAD1 p.Pro330Ser Uncertain significance Single submitter
- ATAD1 p.Ser245Leu Uncertain significance Single submitter
All ATAD1 variants
Pathogenic 1
- c.690+1G>C Single submitter
Pathogenic/Likely pathogenic 2
- p.Glu276Ter Multiple submitters hyperekplexia 4
- p.His357fs Multiple submitters hyperekplexia 4
Benign 3
- c.966-14del Single submitter
- p.Ala210= Single submitter
- p.His357= Single submitter
Benign/Likely benign 1
- p.Leu219= Multiple submitters hyperekplexia 4
Likely benign 108
- c.690+11A>G Multiple submitters
- p.Pro260= Multiple submitters
- p.Thr101= Multiple submitters
- c.162+12A>G Single submitter
- c.162+7T>C Single submitter
- c.163-17_163-14del Single submitter
- c.163-19T>G Single submitter
- c.163-4C>G Single submitter
- c.163-5T>C Single submitter
- c.163-8C>T Single submitter
- c.261+12T>C Single submitter
- c.261+18del Single submitter
- c.261+20T>C Single submitter
- c.262-5G>A Single submitter
- c.262-7T>C Single submitter
- c.382+15T>G Single submitter
- c.382+18A>G Single submitter
- c.383-10T>G Single submitter
- c.383-11T>C Single submitter
- c.383-16A>G Single submitter
- c.383-19A>C Single submitter
- c.583+10G>A Single submitter
- c.583+12T>C Single submitter
- c.583+19A>G Single submitter
- c.583+20T>G Single submitter
- c.583+8A>G Single submitter
- c.584-12T>C Single submitter
- c.584-15A>G Single submitter
- c.584-8A>G Single submitter
- c.690+18G>A Single submitter
- c.690+7G>T Single submitter
- c.691-10A>G Single submitter
- c.691-11T>C Single submitter
- c.691-14_691-12del Single submitter
- c.691-14C>A Single submitter
- c.780+10C>A Single submitter
- c.780+18A>T Single submitter
- c.831+12A>G Single submitter
- c.831+14A>G Single submitter
- c.831+15A>C Single submitter
- c.831+16_831+18del Single submitter
- c.831+17A>C Single submitter
- c.831+20T>A Single submitter
- c.832-7G>A Single submitter
- c.832-9T>A Single submitter
- c.965+12T>A Single submitter
- c.965+17del Single submitter
- c.966-13G>C Single submitter
- c.966-15T>C Single submitter
- p.Ala236= Single submitter
- p.Ala261= Single submitter
- p.Ala306= Single submitter
- p.Ala350= Single submitter
- p.Arg121= Single submitter
- p.Arg13= Single submitter
- p.Arg329= Single submitter
- p.Arg45= Single submitter
- p.Asn156= Single submitter
- p.Asn200= Single submitter
- p.Asp279= Single submitter
- p.Asp324= Single submitter
- p.Asp335= Single submitter
- p.Asp98= Single submitter
- p.Gln124= Single submitter
- p.Gln185= Single submitter
- p.Glu118= Single submitter
- p.Glu320= Single submitter
- p.Glu71= Single submitter
- p.Gly151= Single submitter
- p.Gly293= Single submitter
- p.Ile155= Single submitter
- p.Ile328= Single submitter
- p.Leu103= Single submitter
- p.Leu109= Single submitter
- p.Leu162= Single submitter
- p.Leu173= Single submitter
- p.Leu184= Single submitter
- p.Leu198= Single submitter
- p.Leu269= Single submitter
- p.Leu355= Single submitter
- p.Lys104= Single submitter
- p.Lys112= Single submitter
- p.Lys148= Single submitter
- p.Lys165= Single submitter
- p.Lys46= Single submitter
- p.Phe26= Single submitter
- p.Phe32= Single submitter
- p.Pro135= Single submitter
- p.Pro186= Single submitter
- p.Pro43= Single submitter
- p.Ser160= Single submitter
- p.Ser245= Single submitter
- p.Ser70= Single submitter
- p.Ser8= Single submitter
- p.Ser91= Single submitter
- p.Thr106= Single submitter
- p.Thr140= Single submitter
- p.Thr161= Single submitter
- p.Thr163= Single submitter
- p.Thr24= Single submitter
- p.Thr291= Single submitter
- p.Tyr132= Single submitter
- p.Tyr72= Single submitter
- p.Val107= Single submitter
- p.Val177= Single submitter
- p.Val49= Single submitter
- c.261+9C>A No assertion criteria ATAD1-related disorder
- c.*2A>T No assertion criteria ATAD1-related disorder
Uncertain significance 92
- p.Ala339Val Multiple submitters Inborn genetic diseases ⚠
- p.Ala55Thr Multiple submitters Inborn genetic diseases ⚠
- p.Arg338Gln Multiple submitters Inborn genetic diseases ⚠
- p.Asp164Asn Multiple submitters Inborn genetic diseases ⚠
- p.Gln185Glu Multiple submitters Inborn genetic diseases ⚠
- p.Gln352Pro Multiple submitters Inborn genetic diseases ⚠
- p.Gln54Glu Multiple submitters hyperekplexia 4 ⚠
- p.Glu290Lys Multiple submitters Inborn genetic diseases ⚠
- p.His227Asn Multiple submitters Inborn genetic diseases ⚠
- p.His256Leu Multiple submitters hyperekplexia 4 ⚠
- p.Ile41Val Multiple submitters Inborn genetic diseases ⚠
- p.Lys68Asn Multiple submitters Inborn genetic diseases ⚠
- p.Ser75Asn Multiple submitters Inborn genetic diseases ⚠
- p.Val287Ala Multiple submitters Inborn genetic diseases ⚠
- c.162+4T>C Single submitter
- c.162+6A>G Single submitter
- c.382+1G>C Single submitter
- c.382+5G>A Single submitter
- c.382+6G>T Single submitter
- c.382+9A>G Single submitter
- c.383-3C>T Single submitter
- c.583+6C>A Single submitter
- c.584-2A>G Single submitter
- c.831+1G>A Single submitter
- c.965+1G>T Single submitter
- c.965+3A>G Single submitter
- c.965+5G>A Single submitter
- c.-48C>G Single submitter hyperekplexia 4
- p.Ala261Thr Single submitter ⚠
- p.Ala349Val Single submitter ⚠
- p.Ala40Val Single submitter ⚠
- p.Ala4Thr Single submitter Inborn genetic diseases ⚠
- p.Arg153Gln Single submitter ⚠
- p.Arg199Ter Single submitter
- p.Arg201His Single submitter ⚠
- p.Arg239His Single submitter ⚠
- p.Arg265fs Single submitter
- p.Arg304Gln Single submitter ⚠
- p.Arg329Trp Single submitter ⚠
- p.Arg338= Single submitter
- p.Arg338Trp Single submitter ⚠
- p.Arg9His Single submitter ⚠
- p.Asp224Gly Single submitter ⚠
- p.Asp324Tyr Single submitter Inborn genetic diseases ⚠
- p.Asp82Glu Single submitter ⚠
- p.Asp92Asn Single submitter ⚠
- p.Cys303fs Single submitter
- p.Gln124Arg Single submitter ⚠
- p.Gln230Ter Single submitter
- p.Gln259His Single submitter ⚠
- p.Gln352Arg Single submitter ⚠
- p.Gln54His Single submitter hyperekplexia 4 ⚠
- p.Glu266fs Single submitter
- p.Glu325Lys Single submitter ⚠
- p.Glu341Gly Single submitter ⚠
- p.Gly151Asp Single submitter ⚠
- p.His281Pro Single submitter ⚠
- p.Ile155Val Single submitter ⚠
- p.Ile182Leu Single submitter ⚠
- p.Ile182Val Single submitter ⚠
- p.Ile257Ser Single submitter ⚠
- p.Ile25Thr Single submitter ⚠
- p.Ile272Phe Single submitter Inborn genetic diseases ⚠
- p.Ile340Leu Single submitter ⚠
- p.Ile34Val Single submitter ⚠
- p.Leu130Val Single submitter ⚠
- p.Lys113Arg Single submitter ⚠
- p.Lys139Glu Single submitter ⚠
- p.Lys165Gln Single submitter ⚠
- p.Lys347fs Single submitter
- p.Lys35Arg Single submitter ⚠
- p.Met248Arg Single submitter ⚠
- p.Met37Leu Single submitter Inborn genetic diseases ⚠
- p.Met59Val Single submitter ⚠
- p.Met74Val Single submitter ⚠
- p.Met86Val Single submitter ⚠
- p.Phe216Cys Single submitter ⚠
- p.Phe255Leu Single submitter ⚠
- p.Phe32Val Single submitter ⚠
- p.Pro260Ala Single submitter ⚠
- p.Pro330Ser Single submitter ⚠
- p.Ser245Leu Single submitter ⚠
- p.Ser75Thr Single submitter ⚠
- p.Thr101Met Single submitter ⚠
- p.Thr140Ala Single submitter hyperekplexia 4 ⚠
- p.Thr140Met Single submitter ⚠
- p.Thr24Ala Single submitter ⚠
- p.Thr318Ala Single submitter ⚠
- p.Thr318Ile Single submitter ⚠
- p.Tyr132Cys Single submitter Inborn genetic diseases ⚠
- p.Val129Ala Single submitter ⚠
- p.Val88Ala Single submitter ⚠