BTK — 848 ClinVar variants

All ClinVar germline BTK variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 166 flagged for review →

220 Pathogenic · 19 Pathogenic/Likely pathogenic · 111 Likely pathogenic · 23 Conflicting · 53 Benign · 17 Benign/Likely benign · 208 Likely benign · 197 Uncertain significance

Full BTK gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 166

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors vs ClinVar 1

ClinVar calls these pathogenic, but the computational predictors lean tolerated — the highest-value review flag.

Predictors agree, ClinVar conflicts 8

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 113

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 44

The independent predictors disagree with each other — read with care.

All BTK variants

Pathogenic 220

  • c.1349+1G>A Multiple submitters Bruton-type agammaglobulinemia
  • c.1632-2A>G Multiple submitters isolated growth hormone deficiency type III
  • c.588+1G>T Multiple submitters isolated growth hormone deficiency type III
  • p.Arg13Ter Multiple submitters Bruton-type agammaglobulinemia
  • p.Arg255Ter Multiple submitters Bruton-type agammaglobulinemia
  • p.Arg288Gln Multiple submitters Bruton-type agammaglobulinemia
  • p.Arg28Cys Multiple submitters Bruton-type agammaglobulinemia
  • p.Arg28His Multiple submitters Bruton-type agammaglobulinemia
  • p.Arg520Gln Multiple submitters BTK-related disorder
  • p.Arg520Ter Multiple submitters isolated growth hormone deficiency type III
  • p.Arg525Ter Multiple submitters isolated growth hormone deficiency type III
  • p.Arg562Trp Multiple submitters BTK-related disorder
  • p.Arg641His Multiple submitters BTK-related disorder
  • p.Asn72fs Multiple submitters isolated growth hormone deficiency type III
  • p.Cys527fs Multiple submitters isolated growth hormone deficiency type III
  • p.Gln380Ter Multiple submitters Bruton-type agammaglobulinemia
  • p.Gln612Ter Multiple submitters Bruton-type agammaglobulinemia
  • p.Glu441Ter Multiple submitters Bruton-type agammaglobulinemia
  • p.Gly594Glu Multiple submitters BTK-related disorder
  • p.His362Arg Multiple submitters BTK-related disorder
  • p.Leu369Pro Multiple submitters Bruton-type agammaglobulinemia
  • p.Lys141fs Multiple submitters Bruton-type agammaglobulinemia
  • p.Lys60del Multiple submitters isolated growth hormone deficiency type III
  • p.Met1Ile Multiple submitters isolated growth hormone deficiency type III
  • p.Thr158fs Multiple submitters isolated growth hormone deficiency type III
  • p.Thr474fs Multiple submitters isolated growth hormone deficiency type III
  • p.Trp252Ter Multiple submitters Bruton-type agammaglobulinemia
  • p.Trp588Ter Multiple submitters isolated growth hormone deficiency type III
  • p.Tyr241fs Multiple submitters Bruton-type agammaglobulinemia
  • p.Tyr40Cys Multiple submitters isolated growth hormone deficiency type III
  • p.Val219fs Multiple submitters isolated growth hormone deficiency type III
  • c.1350-1G>A Single submitter isolated growth hormone deficiency type III
  • c.1350-2A>G Single submitter isolated growth hormone deficiency type III
  • c.1567-2A>C Single submitter isolated growth hormone deficiency type III
  • c.1567-2A>G Single submitter isolated growth hormone deficiency type III
  • c.1631+2T>C Single submitter isolated growth hormone deficiency type III
  • c.1750+1G>A Single submitter isolated growth hormone deficiency type III
  • c.1750+1G>T Single submitter isolated growth hormone deficiency type III
  • c.1750+5G>A Single submitter isolated growth hormone deficiency type III
  • c.1751-1G>A Single submitter isolated growth hormone deficiency type III
  • c.1751-1G>C Single submitter isolated growth hormone deficiency type III
  • c.1751-1G>T Single submitter isolated growth hormone deficiency type III
  • c.1751-2A>G Single submitter isolated growth hormone deficiency type III
  • c.(240+1_241-1 Single submitter Bruton-type agammaglobulinemia
  • c.241-1G>C Single submitter isolated growth hormone deficiency type III
  • c.309+1G>A Single submitter isolated growth hormone deficiency type III
  • c.310-1G>C Single submitter isolated growth hormone deficiency type III
  • c.310dupG Single submitter Bruton-type agammaglobulinemia
  • c.391+1G>A Single submitter isolated growth hormone deficiency type III
  • c.418_424insSVA Single submitter Bruton-type agammaglobulinemia
  • c.495_(520+1_521-1 Single submitter Bruton-type agammaglobulinemia
  • c.520+1G>A Single submitter isolated growth hormone deficiency type III
  • c.521-1G>A Single submitter isolated growth hormone deficiency type III
  • c.588+1G>A Single submitter isolated growth hormone deficiency type III
  • c.588+2T>C Single submitter Bruton-type agammaglobulinemia
  • c.894+1G>C Single submitter isolated growth hormone deficiency type III
  • c.895-1G>A Single submitter
  • c.895-1G>T Single submitter isolated growth hormone deficiency type III
  • c.895-2A>T Single submitter isolated growth hormone deficiency type III
  • c.895-37_928del Single submitter isolated growth hormone deficiency type III
  • c.974+1G>A Single submitter isolated growth hormone deficiency type III
  • c.974+1G>T Single submitter isolated growth hormone deficiency type III
  • c.975-1G>T Single submitter isolated growth hormone deficiency type III
  • p.Ala622fs Single submitter isolated growth hormone deficiency type III
  • p.Arg253fs Single submitter
  • p.Arg288Gly Single submitter Bruton-type agammaglobulinemia
  • p.Arg520Gly Single submitter isolated growth hormone deficiency type III
  • p.Arg525Gly Single submitter isolated growth hormone deficiency type III
  • p.Arg544Gly Single submitter isolated growth hormone deficiency type III
  • p.Arg544Ser Single submitter isolated growth hormone deficiency type III
  • p.Asn130fs Single submitter isolated growth hormone deficiency type III
  • p.Asn172fs Single submitter isolated growth hormone deficiency type III
  • p.Asn360fs Single submitter
  • p.Asn526fs Single submitter BTK-related disorder
  • p.Asp548fs Single submitter isolated growth hormone deficiency type III
  • p.Cys155Ter Single submitter isolated growth hormone deficiency type III
  • p.Cys502Tyr Single submitter isolated growth hormone deficiency type III
  • p.Cys506Tyr Single submitter isolated growth hormone deficiency type III
  • p.Cys527Ser Single submitter
  • p.Gln103Ter Single submitter
  • p.Gln127fs Single submitter isolated growth hormone deficiency type III
  • p.Gln157Ter Single submitter
  • p.Gln15fs Single submitter isolated growth hormone deficiency type III
  • p.Gln166Ter Single submitter isolated growth hormone deficiency type III
  • p.Gln16Ter Single submitter
  • p.Gln260Ter Single submitter isolated growth hormone deficiency type III
  • p.Gln297Ter Single submitter isolated growth hormone deficiency type III
  • p.Gln379Ter Single submitter isolated growth hormone deficiency type III
  • p.Gln467Ter Single submitter isolated growth hormone deficiency type III
  • p.Gln497Ter Single submitter
  • p.Gln516Ter Single submitter isolated growth hormone deficiency type III
  • p.Gln78Ter Single submitter isolated growth hormone deficiency type III
  • p.Gln91Ter Single submitter Bruton-type agammaglobulinemia
  • p.Glu118fs Single submitter
  • p.Glu119fs Single submitter isolated growth hormone deficiency type III
  • p.Glu434Ter Single submitter isolated growth hormone deficiency type III
  • p.Glu513fs Single submitter isolated growth hormone deficiency type III
  • p.Glu567fs Single submitter isolated growth hormone deficiency type III
  • p.Glu567Ter Single submitter
  • p.Glu589Ter Single submitter isolated growth hormone deficiency type III
  • p.Glu65Ter Single submitter isolated growth hormone deficiency type III
  • p.Glu76fs Single submitter isolated growth hormone deficiency type III
  • p.Glu90fs Single submitter isolated growth hormone deficiency type III
  • p.Glu96Ter Single submitter isolated growth hormone deficiency type III
  • p.Gly303fs Single submitter isolated growth hormone deficiency type III
  • p.Gly368Glu Single submitter
  • p.Gly368Ter Single submitter isolated growth hormone deficiency type III
  • p.Gly391Ter Single submitter isolated growth hormone deficiency type III
  • p.Gly47fs Single submitter isolated growth hormone deficiency type III
  • p.Gly541_Leu542insArgAlaGlyGluArgArgProGlyGlySerGlyTrpArgSerGlyArgAlaProProGlyProArgAlaThrSerArgProGlnProXaaXaaXaaLysLysLysLysLysLysAsnLysValSerAspPheGly Single submitter isolated growth hormone deficiency type III
  • p.Gly594Arg Single submitter isolated growth hormone deficiency type III
  • p.Ile331fs Single submitter Bruton-type agammaglobulinemia
  • p.Ile355Asn Single submitter
  • p.Ile629_Ser632del Single submitter isolated growth hormone deficiency type III
  • p.Ile629fs Single submitter
  • p.Ile92fs Single submitter isolated growth hormone deficiency type III
  • p.Ile94fs Single submitter Bruton-type agammaglobulinemia
  • p.Leu11Pro Single submitter isolated growth hormone deficiency type III
  • p.Leu153fs Single submitter isolated growth hormone deficiency type III
  • p.Leu460Ter Single submitter isolated growth hormone deficiency type III
  • p.Leu498Val Single submitter isolated growth hormone deficiency type III
  • p.Leu512fs Single submitter Bruton-type agammaglobulinemia
  • p.Leu512Pro Single submitter isolated growth hormone deficiency type III
  • p.Leu593fs Single submitter isolated growth hormone deficiency type III
  • p.Lys183fs Single submitter isolated growth hormone deficiency type III
  • p.Lys199Ter Single submitter isolated growth hormone deficiency type III
  • p.Lys311Ter Single submitter isolated growth hormone deficiency type III
  • p.Lys417Ter Single submitter isolated growth hormone deficiency type III
  • p.Lys420fs Single submitter Bruton-type agammaglobulinemia
  • p.Lys515fs Single submitter isolated growth hormone deficiency type III
  • p.Lys52Ter Single submitter isolated growth hormone deficiency type III
  • p.Lys536Ter Single submitter isolated growth hormone deficiency type III
  • p.Met163fs Single submitter
  • p.Met477fs Single submitter
  • p.Met596fs Single submitter Bruton-type agammaglobulinemia
  • p.Phe146_Trp147insTer Single submitter isolated growth hormone deficiency type III
  • p.Phe320fs Single submitter isolated growth hormone deficiency type III
  • p.Phe644Ser Single submitter isolated growth hormone deficiency type III
  • p.Pro187fs Single submitter isolated growth hormone deficiency type III
  • p.Pro190fs Single submitter isolated growth hormone deficiency type III
  • p.Pro227fs Single submitter isolated growth hormone deficiency type III
  • p.Pro566Arg Single submitter isolated growth hormone deficiency type III
  • p.Pro566fs Single submitter isolated growth hormone deficiency type III
  • p.Ser14Tyr Single submitter
  • p.Ser156fs Single submitter isolated growth hormone deficiency type III
  • p.Ser21Ter Single submitter isolated growth hormone deficiency type III
  • p.Ser318fs Single submitter isolated growth hormone deficiency type III
  • p.Ser572fs Single submitter isolated growth hormone deficiency type III
  • p.Ser575Arg Single submitter isolated growth hormone deficiency type III
  • p.Ser93Ter Single submitter isolated growth hormone deficiency type III
  • p.Thr117Pro Single submitter isolated growth hormone deficiency type III
  • p.Thr628fs Single submitter isolated growth hormone deficiency type III
  • p.Thr643fs Single submitter isolated growth hormone deficiency type III
  • p.Trp252fs Single submitter isolated growth hormone deficiency type III
  • p.Trp395Ter Single submitter
  • p.Trp421Ter Single submitter isolated growth hormone deficiency type III
  • p.Trp563Ter Single submitter isolated growth hormone deficiency type III
  • p.Trp581Arg Single submitter Bruton-type agammaglobulinemia
  • p.Trp581fs Single submitter isolated growth hormone deficiency type III
  • p.Trp581Ter Single submitter isolated growth hormone deficiency type III
  • p.Tyr100Ter Single submitter Bruton-type agammaglobulinemia
  • p.Tyr112fs Single submitter isolated growth hormone deficiency type III
  • p.Tyr112His Single submitter isolated growth hormone deficiency type III
  • p.Tyr112Ter Single submitter isolated growth hormone deficiency type III
  • p.Tyr134Ter Single submitter isolated growth hormone deficiency type III
  • p.Tyr142Ter Single submitter isolated growth hormone deficiency type III
  • p.Tyr223Ter Single submitter
  • p.Tyr241Ter Single submitter Bruton-type agammaglobulinemia
  • p.Tyr279Ter Single submitter Inherited Immunodeficiency Diseases
  • p.Tyr375Ter Single submitter isolated growth hormone deficiency type III
  • p.Tyr392Ter Single submitter isolated growth hormone deficiency type III
  • p.Tyr461fs Single submitter
  • p.Tyr485Ter Single submitter Bruton-type agammaglobulinemia
  • p.Tyr598Asn Single submitter Bruton-type agammaglobulinemia
  • p.Tyr598Ter Single submitter
  • p.Tyr631Ter Single submitter isolated growth hormone deficiency type III
  • p.Val335Asp Single submitter Bruton-type agammaglobulinemia ⚠
  • p.Val427fs Single submitter isolated growth hormone deficiency type III
  • c.141+3_141+4del No assertion criteria Bruton-type agammaglobulinemia
  • c.141+3_141+6del No assertion criteria autosomal recessive agammaglobulinemia 1
  • c.1567-2A>T No assertion criteria autosomal recessive agammaglobulinemia 1
  • c.1630_1631+3delinsGAAA No assertion criteria autosomal recessive agammaglobulinemia 1
  • c.1631+1G>T No assertion criteria Bruton-type agammaglobulinemia
  • c.1632-2A>T No assertion criteria Bruton-type agammaglobulinemia
  • c.310-2A>G No assertion criteria Bruton-type agammaglobulinemia
  • c.894+191_1908+163del No assertion criteria Bruton-type agammaglobulinemia
  • c.895-2del No assertion criteria Bruton-type agammaglobulinemia
  • c.974+1del No assertion criteria Bruton-type agammaglobulinemia
  • c.-31+5G>A No assertion criteria Bruton-type agammaglobulinemia
  • p.Ala607Asp No assertion criteria Bruton-type agammaglobulinemia
  • p.Arg307Gly No assertion criteria Bruton-type agammaglobulinemia
  • p.Arg372Ser No assertion criteria autosomal recessive agammaglobulinemia 1
  • p.Asn530fs No assertion criteria Bruton-type agammaglobulinemia
  • p.Cys145Ter No assertion criteria autosomal recessive agammaglobulinemia 1
  • p.Cys502Ter No assertion criteria Bruton-type agammaglobulinemia
  • p.Gln496Ter No assertion criteria Bruton-type agammaglobulinemia
  • p.Glu240Ter No assertion criteria Bruton-type agammaglobulinemia
  • p.Glu589Gly No assertion criteria Bruton-type agammaglobulinemia
  • p.Glu636Ter No assertion criteria Bruton-type agammaglobulinemia
  • p.Gly54fs No assertion criteria autosomal recessive agammaglobulinemia 1
  • p.Ile197fs No assertion criteria Bruton-type agammaglobulinemia
  • p.Ile243fs No assertion criteria Bruton-type agammaglobulinemia
  • p.Ile56fs No assertion criteria Bruton-type agammaglobulinemia
  • p.Leu408Pro No assertion criteria Bruton-type agammaglobulinemia
  • p.Leu569Pro No assertion criteria autosomal recessive agammaglobulinemia 1
  • p.Leu652Pro No assertion criteria Bruton-type agammaglobulinemia
  • p.Lys218fs No assertion criteria Bruton-type agammaglobulinemia
  • p.Lys430Glu No assertion criteria Bruton-type agammaglobulinemia
  • p.Lys637delinsPheTer No assertion criteria Bruton-type agammaglobulinemia
  • p.Met630Lys No assertion criteria Bruton-type agammaglobulinemia
  • p.Ser214fs No assertion criteria Bruton-type agammaglobulinemia
  • p.Ser318Phe No assertion criteria autosomal recessive agammaglobulinemia 1
  • p.Ser378fs No assertion criteria Bruton-type agammaglobulinemia
  • p.Ser543Pro No assertion criteria Bruton-type agammaglobulinemia ⚠
  • p.Ser649fs No assertion criteria autosomal recessive agammaglobulinemia 1
  • p.Thr33Pro No assertion criteria Bruton-type agammaglobulinemia
  • p.Tyr334Ser No assertion criteria Bruton-type agammaglobulinemia
  • p.Tyr425Ter No assertion criteria Bruton-type agammaglobulinemia
  • p.Tyr42Ter No assertion criteria Bruton-type agammaglobulinemia
  • p.Val113Asp No assertion criteria Bruton-type agammaglobulinemia

Pathogenic/Likely pathogenic 19

  • c.1103-2A>G Multiple submitters isolated growth hormone deficiency type III
  • c.777-1G>A Multiple submitters Bruton-type agammaglobulinemia
  • c.777-2A>G Multiple submitters isolated growth hormone deficiency type III
  • c.894+1G>A Multiple submitters Bruton-type agammaglobulinemia
  • c.895-2A>G Multiple submitters isolated growth hormone deficiency type III
  • p.Arg288Trp Multiple submitters BTK-related disorder
  • p.Arg28Leu Multiple submitters Bruton-type agammaglobulinemia
  • p.Arg525Gln Multiple submitters BTK-related disorder
  • p.Arg562Pro Multiple submitters isolated growth hormone deficiency type III
  • p.Arg641Cys Multiple submitters isolated growth hormone deficiency type III
  • p.Gln15Ter Multiple submitters Inherited Immunodeficiency Diseases
  • p.Ile61Asn Multiple submitters isolated growth hormone deficiency type III
  • p.Met1Thr Multiple submitters isolated growth hormone deficiency type III
  • p.Met509Thr Multiple submitters Bruton-type agammaglobulinemia
  • p.Met630Thr Multiple submitters Bruton-type agammaglobulinemia
  • p.Pro80= Multiple submitters BTK-related disorder
  • p.Trp124Ter Multiple submitters Bruton-type agammaglobulinemia
  • p.Tyr591Ter Multiple submitters isolated growth hormone deficiency type III
  • p.Val269fs Multiple submitters Bruton-type agammaglobulinemia

Likely pathogenic 111

  • c.839+1G>C Multiple submitters isolated growth hormone deficiency type III
  • c.840-1G>A Multiple submitters Bruton-type agammaglobulinemia
  • c.974+5G>A Multiple submitters isolated growth hormone deficiency type III
  • p.Arg641Pro Multiple submitters Bruton-type agammaglobulinemia
  • p.Asn526Lys Multiple submitters isolated growth hormone deficiency type III
  • p.His454Arg Multiple submitters isolated growth hormone deficiency type III
  • p.Tyr598Cys Multiple submitters isolated growth hormone deficiency type III
  • c.1103-2A>C Single submitter
  • c.1300_1909-813del Single submitter isolated growth hormone deficiency type III
  • c.1349+4A>T Single submitter BTK-related disorder
  • c.141+1G>C Single submitter isolated growth hormone deficiency type III
  • c.1566_1566+9del Single submitter Bruton-type agammaglobulinemia
  • c.1566+1G>A Single submitter BTK-related disorder
  • c.1567-117_1604del Single submitter isolated growth hormone deficiency type III
  • c.1631+5G>C Single submitter isolated growth hormone deficiency type III
  • c.1908+1G>T Single submitter isolated growth hormone deficiency type III
  • c.1908+2dup Single submitter isolated growth hormone deficiency type III
  • c.1909-2A>G Single submitter Agammaglobulinaemia with absent BTK expression
  • c.240+109C>A Single submitter isolated growth hormone deficiency type III
  • c.241_260dup Single submitter Bruton-type agammaglobulinemia
  • c.588+2T>A Single submitter Bruton-type agammaglobulinemia
  • c.776+1del Single submitter Bruton-type agammaglobulinemia
  • c.776+2T>C Single submitter isolated growth hormone deficiency type III
  • c.839+1G>A Single submitter BTK-related disorder
  • c.842_844delGGT Single submitter
  • c.974+5G>C Single submitter isolated growth hormone deficiency type III
  • c.975-2A>G Single submitter BTK-related disorder
  • c.-31+5G>T Single submitter
  • p.Ala162fs Single submitter
  • p.Ala582Val Single submitter isolated growth hormone deficiency type III
  • p.Arg562Gln Single submitter Bruton-type agammaglobulinemia
  • p.Arg615His Single submitter Bruton-type agammaglobulinemia
  • p.Arg618fs Single submitter Bruton-type agammaglobulinemia
  • p.Asn267fs Single submitter Bruton-type agammaglobulinemia
  • p.Asp521Glu Single submitter isolated growth hormone deficiency type III
  • p.Asp521Gly Single submitter BTK-related disorder
  • p.Cys154Gly Single submitter isolated growth hormone deficiency type III
  • p.Cys155Gly Single submitter Bruton-type agammaglobulinemia
  • p.Cys165Tyr Single submitter isolated growth hormone deficiency type III
  • p.Cys527Tyr Single submitter Inherited Immunodeficiency Diseases
  • p.Gln151Ter Single submitter Bruton-type agammaglobulinemia
  • p.Gln196His Single submitter ⚠
  • p.Gln516del Single submitter
  • p.Gln78fs Single submitter Bruton-type agammaglobulinemia
  • p.Glu277Ter Single submitter Bruton-type agammaglobulinemia
  • p.Glu45_Arg46del Single submitter isolated growth hormone deficiency type III
  • p.Glu567Asp Single submitter BTK-related disorder
  • p.Glu589Asp Single submitter isolated growth hormone deficiency type III
  • p.Glu589Lys Single submitter BTK-related disorder
  • p.Gly302Arg Single submitter Bruton-type agammaglobulinemia
  • p.Gly303del Single submitter
  • p.Gly541Cys Single submitter Bruton-type agammaglobulinemia
  • p.Gly613Asp Single submitter Bruton-type agammaglobulinemia
  • p.His362Tyr Single submitter BTK-related disorder ⚠
  • p.His454Leu Single submitter isolated growth hormone deficiency type III
  • p.His454Pro Single submitter isolated growth hormone deficiency type III
  • p.His519Gln Single submitter BTK-related disorder
  • p.Ile359Thr Single submitter isolated growth hormone deficiency type III
  • p.Ile56Thr Single submitter isolated growth hormone deficiency type III
  • p.Leu111Arg Single submitter isolated growth hormone deficiency type III
  • p.Leu295Pro Single submitter isolated growth hormone deficiency type III
  • p.Leu358Phe Single submitter isolated growth hormone deficiency type III
  • p.Leu373Ile Single submitter isolated growth hormone deficiency type III
  • p.Leu452Pro Single submitter Bruton-type agammaglobulinemia
  • p.Leu512Gln Single submitter isolated growth hormone deficiency type III
  • p.Leu586Ser Single submitter
  • p.Leu614fs Single submitter
  • p.Leu647fs Single submitter
  • p.Lys12Asn Single submitter Bruton-type agammaglobulinemia
  • p.Lys314= Single submitter BTK-related disorder
  • p.Lys430Arg Single submitter Bruton-type agammaglobulinemia
  • p.Lys558fs Single submitter Bruton-type agammaglobulinemia
  • p.Lys573fs Single submitter Bruton-type agammaglobulinemia
  • p.Met1Val Single submitter Agammaglobulinaemia with absent BTK expression
  • p.Met509Ile Single submitter
  • p.Met587Thr Single submitter
  • p.Met596Thr Single submitter common variable immunodeficiency ⚠
  • p.Met630Leu Single submitter
  • p.Phe102Ser Single submitter isolated growth hormone deficiency type III
  • p.Phe583Ser Single submitter Agammaglobulinaemia with absent BTK expression
  • p.Phe583Val Single submitter isolated growth hormone deficiency type III
  • p.Phe644Leu Single submitter isolated growth hormone deficiency type III
  • p.Pro565Leu Single submitter isolated growth hormone deficiency type III
  • p.Pro566Ser Single submitter isolated growth hormone deficiency type III
  • p.Pro597Leu Single submitter isolated growth hormone deficiency type III
  • p.Pro642fs Single submitter Bruton-type agammaglobulinemia
  • p.Pro642Leu Single submitter Bruton-type agammaglobulinemia
  • p.Ser371Pro Single submitter
  • p.Ser55Ter Single submitter Bruton-type agammaglobulinemia
  • p.Ter660Gly Single submitter
  • p.Thr316Ala Single submitter ⚠
  • p.Thr602Ile Single submitter
  • p.Trp124Arg Single submitter
  • p.Trp124Cys Single submitter Bruton-type agammaglobulinemia
  • p.Trp281Ter Single submitter Bruton-type agammaglobulinemia
  • p.Trp563Leu Single submitter
  • p.Trp588Arg Single submitter isolated growth hormone deficiency type III
  • p.Trp588Leu Single submitter isolated growth hormone deficiency type III
  • p.Trp634Ser Single submitter isolated growth hormone deficiency type III
  • p.Trp634Ter Single submitter Primary immunodeficiency or monogenic inflammatory bowel disease
  • p.Tyr152Cys Single submitter isolated growth hormone deficiency type III
  • p.Tyr361Cys Single submitter isolated growth hormone deficiency type III
  • p.Tyr40fs Single submitter BTK-related disorder
  • p.Tyr545Ter Single submitter Bruton-type agammaglobulinemia
  • p.Tyr571Ter Single submitter Bruton-type agammaglobulinemia
  • p.Tyr591fs Single submitter Bruton-type agammaglobulinemia
  • p.Tyr598Ser Single submitter isolated growth hormone deficiency type III
  • p.Tyr627Ter Single submitter Agammaglobulinaemia with absent BTK expression
  • p.Val505Phe Single submitter isolated growth hormone deficiency type III
  • p.Val67fs Single submitter BTK-related disorder
  • p.Glu41fs No assertion criteria Bruton-type agammaglobulinemia

Conflicting classifications of pathogenicity 23

  • c.141+11C>T Single submitter Bruton-type agammaglobulinemia
  • c.142-205A>G Single submitter BTK-related disorder
  • c.142-8C>T Single submitter isolated growth hormone deficiency type III
  • c.1567-12_1567-9del Single submitter Bruton-type agammaglobulinemia
  • c.1909-9T>C Single submitter Bruton-type agammaglobulinemia
  • c.520+15C>T Single submitter Bruton-type agammaglobulinemia
  • c.894+7G>A Single submitter isolated growth hormone deficiency type III
  • p.Arg255Gln Single submitter Inherited Immunodeficiency Diseases ⚠
  • p.Arg492His Single submitter Bruton-type agammaglobulinemia ⚠
  • p.Asp504Val Single submitter isolated growth hormone deficiency type III ⚠
  • p.Cys481Ser Single submitter isolated growth hormone deficiency type III ⚠
  • p.His333Arg Single submitter isolated growth hormone deficiency type III ⚠
  • p.Leu198Ser Single submitter Inborn genetic diseases ⚠
  • p.Leu542Pro Single submitter isolated growth hormone deficiency type III ⚠
  • p.Leu648= Single submitter isolated growth hormone deficiency type III
  • p.Lys284= Single submitter Bruton-type agammaglobulinemia
  • p.Met587Ile Single submitter Bruton-type agammaglobulinemia ⚠
  • p.Pro566Leu Single submitter Bruton-type agammaglobulinemia ⚠
  • p.Pro597Ser Single submitter isolated growth hormone deficiency type III ⚠
  • p.Ser174= Single submitter isolated growth hormone deficiency type III
  • p.Ser289Arg Single submitter isolated growth hormone deficiency type III ⚠
  • p.Ser623Leu Single submitter isolated growth hormone deficiency type III ⚠
  • p.Ser659= Single submitter Bruton-type agammaglobulinemia

Benign 53

Benign/Likely benign 17

  • c.1102+7A>G Multiple submitters isolated growth hormone deficiency type III
  • c.1103-11C>G Multiple submitters isolated growth hormone deficiency type III
  • c.1350-17C>A Multiple submitters isolated growth hormone deficiency type III
  • c.1632-20A>C Multiple submitters isolated growth hormone deficiency type III
  • c.241-16dup Multiple submitters isolated growth hormone deficiency type III
  • c.895-10G>A Multiple submitters isolated growth hormone deficiency type III
  • p.Ala209Ser Multiple submitters isolated growth hormone deficiency type III
  • p.Arg236Gln Multiple submitters isolated growth hormone deficiency type III
  • p.Cys633= Multiple submitters Bruton-type agammaglobulinemia
  • p.Glu205Asp Multiple submitters Bruton-type agammaglobulinemia
  • p.Glu513= Multiple submitters isolated growth hormone deficiency type III
  • p.Glu567= Multiple submitters isolated growth hormone deficiency type III
  • p.Gly368= Multiple submitters Inborn genetic diseases
  • p.Pro177= Multiple submitters isolated growth hormone deficiency type III
  • p.Pro566= Multiple submitters isolated growth hormone deficiency type III
  • p.Ser115= Multiple submitters isolated growth hormone deficiency type III
  • p.Tyr418His Multiple submitters Bruton-type agammaglobulinemia

Likely benign 208

  • c.240+10G>C Multiple submitters isolated growth hormone deficiency type III
  • c.240+17G>C Multiple submitters isolated growth hormone deficiency type III
  • c.241-7A>G Multiple submitters isolated growth hormone deficiency type III
  • c.974+17C>T Multiple submitters isolated growth hormone deficiency type III
  • p.Ala2= Multiple submitters isolated growth hormone deficiency type III
  • p.Asp239Glu Multiple submitters isolated growth hormone deficiency type III
  • p.Gln494= Multiple submitters isolated growth hormone deficiency type III
  • p.Phe413= Multiple submitters isolated growth hormone deficiency type III
  • p.Pro597= Multiple submitters isolated growth hormone deficiency type III
  • c.1102+13G>A Single submitter isolated growth hormone deficiency type III
  • c.1102+20G>A Single submitter isolated growth hormone deficiency type III
  • c.1103-17C>G Single submitter isolated growth hormone deficiency type III
  • c.1103-17CT[4] Single submitter isolated growth hormone deficiency type III
  • c.1103-23_1103-20del Single submitter isolated growth hormone deficiency type III
  • c.1177+6T>G Single submitter
  • c.1177+8C>T Single submitter isolated growth hormone deficiency type III
  • c.1178-17C>G Single submitter isolated growth hormone deficiency type III
  • c.1178-19A>C Single submitter isolated growth hormone deficiency type III
  • c.1178-207C>T Single submitter
  • c.1178-8A>T Single submitter isolated growth hormone deficiency type III
  • c.1178-9T>C Single submitter isolated growth hormone deficiency type III
  • c.1349+11G>C Single submitter isolated growth hormone deficiency type III
  • c.1349+18C>T Single submitter isolated growth hormone deficiency type III
  • c.1349+20C>T Single submitter isolated growth hormone deficiency type III
  • c.1349+7T>G Single submitter isolated growth hormone deficiency type III
  • c.1350-4G>A Single submitter isolated growth hormone deficiency type III
  • c.1350-6C>T Single submitter isolated growth hormone deficiency type III
  • c.1350-9T>C Single submitter isolated growth hormone deficiency type III
  • c.141+12G>A Single submitter isolated growth hormone deficiency type III
  • c.141+13A>G Single submitter isolated growth hormone deficiency type III
  • c.141+16A>G Single submitter isolated growth hormone deficiency type III
  • c.141+19A>C Single submitter isolated growth hormone deficiency type III
  • c.142-12T>A Single submitter isolated growth hormone deficiency type III
  • c.142-12T>C Single submitter isolated growth hormone deficiency type III
  • c.142-16T>A Single submitter isolated growth hormone deficiency type III
  • c.142-189T>C Single submitter
  • c.142-4_142-3del Single submitter
  • c.142-4T>C Single submitter isolated growth hormone deficiency type III
  • c.142-5del Single submitter isolated growth hormone deficiency type III
  • c.142-9A>G Single submitter isolated growth hormone deficiency type III
  • c.1566+20G>A Single submitter isolated growth hormone deficiency type III
  • c.1566+7C>T Single submitter isolated growth hormone deficiency type III
  • c.1567-31G>A Single submitter
  • c.1567-8C>T Single submitter isolated growth hormone deficiency type III
  • c.1567-9G>T Single submitter isolated growth hormone deficiency type III
  • c.1631+18A>T Single submitter isolated growth hormone deficiency type III
  • c.1632-15C>T Single submitter isolated growth hormone deficiency type III
  • c.1632-18G>A Single submitter isolated growth hormone deficiency type III
  • c.1632-20A>T Single submitter isolated growth hormone deficiency type III
  • c.1750+11A>G Single submitter isolated growth hormone deficiency type III
  • c.1750+16T>A Single submitter isolated growth hormone deficiency type III
  • c.1751-13T>C Single submitter isolated growth hormone deficiency type III
  • c.1751-16T>C Single submitter isolated growth hormone deficiency type III
  • c.1751-18A>C Single submitter isolated growth hormone deficiency type III
  • c.1751-18A>T Single submitter isolated growth hormone deficiency type III
  • c.1751-8C>T Single submitter isolated growth hormone deficiency type III
  • c.1908+18A>G Single submitter isolated growth hormone deficiency type III
  • c.1908+18A>T Single submitter isolated growth hormone deficiency type III
  • c.1908+294del Single submitter
  • c.1908+7G>T Single submitter isolated growth hormone deficiency type III
  • c.1909-134del Single submitter
  • c.1909-17T>G Single submitter isolated growth hormone deficiency type III
  • c.1909-18C>T Single submitter isolated growth hormone deficiency type III
  • c.1909-20T>C Single submitter isolated growth hormone deficiency type III
  • c.1909-7G>A Single submitter isolated growth hormone deficiency type III
  • c.240+105C>T Single submitter
  • c.240+15A>G Single submitter isolated growth hormone deficiency type III
  • c.240+8G>A Single submitter isolated growth hormone deficiency type III
  • c.240+97G>A Single submitter
  • c.240+9A>T Single submitter isolated growth hormone deficiency type III
  • c.241-4A>G Single submitter isolated growth hormone deficiency type III
  • c.241-5T>C Single submitter isolated growth hormone deficiency type III
  • c.309+13C>T Single submitter isolated growth hormone deficiency type III
  • c.309+17C>T Single submitter isolated growth hormone deficiency type III
  • c.309+8A>C Single submitter isolated growth hormone deficiency type III
  • c.309+8A>G Single submitter isolated growth hormone deficiency type III
  • c.310-19T>A Single submitter isolated growth hormone deficiency type III
  • c.310-22G>C Single submitter
  • c.310-4C>A Single submitter isolated growth hormone deficiency type III
  • c.310-5C>T Single submitter isolated growth hormone deficiency type III
  • c.310-7G>A Single submitter isolated growth hormone deficiency type III
  • c.391+165_391+168del Single submitter
  • c.391+19A>T Single submitter isolated growth hormone deficiency type III
  • c.392-14_392-12del Single submitter
  • c.392-8T>C Single submitter isolated growth hormone deficiency type III
  • c.520+17A>C Single submitter isolated growth hormone deficiency type III
  • c.520+18T>C Single submitter isolated growth hormone deficiency type III
  • c.520+19A>G Single submitter isolated growth hormone deficiency type III
  • c.521-11T>C Single submitter isolated growth hormone deficiency type III
  • c.521-16G>C Single submitter isolated growth hormone deficiency type III
  • c.521-5T>C Single submitter isolated growth hormone deficiency type III
  • c.588+14C>G Single submitter isolated growth hormone deficiency type III
  • c.589-12C>T Single submitter isolated growth hormone deficiency type III
  • c.589-13C>T Single submitter isolated growth hormone deficiency type III
  • c.589-17T>C Single submitter isolated growth hormone deficiency type III
  • c.589-4A>G Single submitter isolated growth hormone deficiency type III
  • c.776+16C>T Single submitter isolated growth hormone deficiency type III
  • c.777-16A>G Single submitter isolated growth hormone deficiency type III
  • c.777-16A>T Single submitter
  • c.777-20C>A Single submitter
  • c.777-9C>G Single submitter isolated growth hormone deficiency type III
  • c.839+19G>A Single submitter isolated growth hormone deficiency type III
  • c.839+19G>T Single submitter isolated growth hormone deficiency type III
  • c.840-17G>T Single submitter isolated growth hormone deficiency type III
  • c.840-8C>T Single submitter isolated growth hormone deficiency type III
  • c.894+15A>C Single submitter isolated growth hormone deficiency type III
  • c.894+9G>A Single submitter isolated growth hormone deficiency type III
  • c.895-13T>C Single submitter isolated growth hormone deficiency type III
  • c.895-7G>T Single submitter isolated growth hormone deficiency type III
  • c.974+18A>G Single submitter isolated growth hormone deficiency type III
  • c.974+19A>G Single submitter isolated growth hormone deficiency type III
  • c.974+7G>A Single submitter isolated growth hormone deficiency type III
  • c.975-19T>G Single submitter isolated growth hormone deficiency type III
  • c.975-4T>G Single submitter isolated growth hormone deficiency type III
  • c.975-7T>C Single submitter isolated growth hormone deficiency type III
  • c.-30-162C>A Single submitter
  • p.Ala208= Single submitter isolated growth hormone deficiency type III
  • p.Ala388= Single submitter
  • p.Ala428= Single submitter isolated growth hormone deficiency type III
  • p.Ala508= Single submitter isolated growth hormone deficiency type III
  • p.Ala582= Single submitter
  • p.Ala611= Single submitter isolated growth hormone deficiency type III
  • p.Ala611Ser Single submitter isolated growth hormone deficiency type III
  • p.Arg121= Single submitter isolated growth hormone deficiency type III
  • p.Arg13= Single submitter isolated growth hormone deficiency type III
  • p.Arg133= Single submitter isolated growth hormone deficiency type III
  • p.Arg422= Single submitter isolated growth hormone deficiency type III
  • p.Arg525= Single submitter isolated growth hormone deficiency type III
  • p.Arg600= Single submitter isolated growth hormone deficiency type III
  • p.Arg618= Single submitter isolated growth hormone deficiency type III
  • p.Asn172= Single submitter isolated growth hormone deficiency type III
  • p.Asn530= Single submitter isolated growth hormone deficiency type III
  • p.Asn72Lys Single submitter isolated growth hormone deficiency type III
  • p.Asp107= Single submitter isolated growth hormone deficiency type III
  • p.Asp232= Single submitter isolated growth hormone deficiency type III
  • p.Asp579= Single submitter isolated growth hormone deficiency type III
  • p.Cys464= Single submitter isolated growth hormone deficiency type III
  • p.Cys63= Single submitter isolated growth hormone deficiency type III
  • p.Gln140= Single submitter isolated growth hormone deficiency type III
  • p.Gln293= Single submitter isolated growth hormone deficiency type III
  • p.Gln380= Single submitter isolated growth hormone deficiency type III
  • p.Gln424= Single submitter isolated growth hormone deficiency type III
  • p.Gln459= Single submitter isolated growth hormone deficiency type III
  • p.Gln78= Single submitter isolated growth hormone deficiency type III
  • p.Glu119= Single submitter isolated growth hormone deficiency type III
  • p.Glu193Gln Single submitter isolated growth hormone deficiency type III
  • p.Glu439= Single submitter isolated growth hormone deficiency type III
  • p.Glu455= Single submitter isolated growth hormone deficiency type III
  • p.Glu608Lys Single submitter isolated growth hormone deficiency type III
  • p.Gly164= Single submitter isolated growth hormone deficiency type III
  • p.Gly389= Single submitter
  • p.Gly462= Single submitter isolated growth hormone deficiency type III
  • p.Gly50= Single submitter isolated growth hormone deficiency type III
  • p.Gly584= Single submitter isolated growth hormone deficiency type III
  • p.His181= Single submitter isolated growth hormone deficiency type III
  • p.Ile148= Single submitter isolated growth hormone deficiency type III
  • p.Ile472= Single submitter isolated growth hormone deficiency type III
  • p.Leu153Ile Single submitter isolated growth hormone deficiency type III ⚠
  • p.Leu168= Single submitter isolated growth hormone deficiency type III
  • p.Leu295= Single submitter isolated growth hormone deficiency type III
  • p.Leu351= Single submitter isolated growth hormone deficiency type III
  • p.Leu369= Single submitter
  • p.Leu460= Single submitter isolated growth hormone deficiency type III
  • p.Leu486= Single submitter isolated growth hormone deficiency type III
  • p.Leu512= Single submitter isolated growth hormone deficiency type III
  • p.Leu542= Single submitter isolated growth hormone deficiency type III
  • p.Lys12= Single submitter isolated growth hormone deficiency type III
  • p.Lys27= Single submitter isolated growth hormone deficiency type III
  • p.Lys300= Single submitter isolated growth hormone deficiency type III
  • p.Lys417= Single submitter isolated growth hormone deficiency type III
  • p.Met228Ile Single submitter
  • p.Met655Ile Single submitter isolated growth hormone deficiency type III
  • p.Phe540= Single submitter isolated growth hormone deficiency type III
  • p.Phe98= Single submitter isolated growth hormone deficiency type III
  • p.Pro101= Single submitter isolated growth hormone deficiency type III
  • p.Pro187= Single submitter isolated growth hormone deficiency type III
  • p.Pro192= Single submitter isolated growth hormone deficiency type III
  • p.Pro203= Single submitter isolated growth hormone deficiency type III
  • p.Pro203Leu Single submitter isolated growth hormone deficiency type III ⚠
  • p.Pro385= Single submitter isolated growth hormone deficiency type III
  • p.Pro399= Single submitter isolated growth hormone deficiency type III
  • p.Ser21= Single submitter isolated growth hormone deficiency type III
  • p.Ser554= Single submitter isolated growth hormone deficiency type III
  • p.Ser564= Single submitter isolated growth hormone deficiency type III
  • p.Ser86= Single submitter isolated growth hormone deficiency type III
  • p.Ser93= Single submitter isolated growth hormone deficiency type III
  • p.Thr117= Single submitter isolated growth hormone deficiency type III
  • p.Thr191= Single submitter isolated growth hormone deficiency type III
  • p.Thr20= Single submitter isolated growth hormone deficiency type III
  • p.Thr213= Single submitter isolated growth hormone deficiency type III
  • p.Thr287= Single submitter isolated growth hormone deficiency type III
  • p.Thr33= Single submitter isolated growth hormone deficiency type III
  • p.Thr628= Single submitter isolated growth hormone deficiency type III
  • p.Tyr106= Single submitter isolated growth hormone deficiency type III
  • p.Tyr112= Single submitter isolated growth hormone deficiency type III
  • p.Tyr268= Single submitter isolated growth hormone deficiency type III
  • p.Tyr282= Single submitter isolated growth hormone deficiency type III
  • p.Tyr345= Single submitter isolated growth hormone deficiency type III
  • p.Tyr361= Single submitter isolated growth hormone deficiency type III
  • p.Tyr392= Single submitter isolated growth hormone deficiency type III
  • p.Tyr425= Single submitter isolated growth hormone deficiency type III
  • p.Tyr476= Single submitter isolated growth hormone deficiency type III
  • p.Val211= Single submitter isolated growth hormone deficiency type III
  • p.Val306= Single submitter
  • p.Val336= Single submitter isolated growth hormone deficiency type III
  • p.Val415= Single submitter isolated growth hormone deficiency type III
  • p.Val534= Single submitter isolated growth hormone deficiency type III
  • p.Asp426= No assertion criteria EBV-positive nodal T- and NK-cell lymphoma

Uncertain significance 197