CEP55 — 123 ClinVar variants
All ClinVar germline CEP55 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 77 flagged for review →
8 Pathogenic · 2 Pathogenic/Likely pathogenic · 2 Likely pathogenic · 3 Conflicting · 16 Benign · 1 Benign/Likely benign · 20 Likely benign · 71 Uncertain significance
Full CEP55 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 77
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 2
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
- CEP55 p.Arg298Lys Conflicting Single submitter
-
CEP55 p.Arg419Lys
Conflicting
Single submitter
Inborn genetic diseases
Predictors lean, ClinVar uncertain 52
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
CEP55 p.Arg385Gln
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
CEP55 p.His293Arg
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
CEP55 p.Pro426Arg
Uncertain significance
Multiple submitters
multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome
-
CEP55 p.Val127Ile
Uncertain significance
Multiple submitters
multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome
-
CEP55 p.Val379Ala
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
CEP55 p.Ala242Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ala358Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ala424Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ala68Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Arg266Gln
Uncertain significance
Single submitter
Inborn genetic diseases
- CEP55 p.Arg315Thr Uncertain significance Single submitter
-
CEP55 p.Arg58Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Arg86Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Arg86Leu
Uncertain significance
Single submitter
Inborn genetic diseases
- CEP55 p.Asn147Ser Uncertain significance Single submitter
-
CEP55 p.Asn434Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Asn444Ser
Uncertain significance
Single submitter
Inborn genetic diseases
- CEP55 p.Asp239Asn Uncertain significance Single submitter
-
CEP55 p.Asp369Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Asp8Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Gln218Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Glu24Lys
Uncertain significance
Single submitter
multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome
-
CEP55 p.Glu407Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Glu451Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Gly32Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.His299Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.His458Arg
Uncertain significance
Single submitter
multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome
-
CEP55 p.Ile10Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ile167Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ile172Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ile304Leu
Uncertain significance
Single submitter
encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1
-
CEP55 p.Leu229Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Lys233Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Lys303Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Phe203Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Pro18Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ser12Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ser133Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ser19Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ser436Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Thr108Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Thr136Ala
Uncertain significance
Single submitter
Inborn genetic diseases
- CEP55 p.Thr209Met Uncertain significance Single submitter
-
CEP55 p.Thr6Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Thr99Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Tyr194Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Tyr228His
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Tyr269Phe
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Tyr75His
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Tyr95Cys
Uncertain significance
Single submitter
Inborn genetic diseases
- CEP55 p.Val127Leu Uncertain significance Single submitter
-
CEP55 p.Arg191Trp
Uncertain significance
No assertion criteria
CEP55-related disorder
Predictors split 23
The independent predictors disagree with each other — read with care.
- CEP55 p.Ala244Pro Benign Multiple submitters
- CEP55 p.Leu59Phe Benign Multiple submitters
-
CEP55 p.Ser2Phe
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
CEP55 p.Ala135Thr
Likely benign
Single submitter
Inborn genetic diseases
- CEP55 p.Arg370Cys Uncertain significance Single submitter
-
CEP55 p.Arg370His
Uncertain significance
Single submitter
Inborn genetic diseases
- CEP55 p.Asp81Gly Uncertain significance Single submitter
-
CEP55 p.Asp8Tyr
Uncertain significance
Single submitter
multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome
-
CEP55 p.Cys359Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Gln342His
Uncertain significance
Single submitter
Inborn genetic diseases
- CEP55 p.Glu321Lys Likely benign Single submitter
-
CEP55 p.Glu326Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Glu364Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Glu61Lys
Conflicting
Single submitter
Inborn genetic diseases
-
CEP55 p.Ile139Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ile304Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Pro448Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ser16Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Ser285Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Thr148Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Thr97Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Tyr194Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
CEP55 p.Tyr269Cys
Uncertain significance
Single submitter
Inborn genetic diseases
All CEP55 variants
Pathogenic 8
- p.Arg86Ter Multiple submitters Inborn genetic diseases
- p.Ser425Ter Multiple submitters multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome
- c.1191+2T>C Single submitter Inborn genetic diseases
- c.993+3A>C Single submitter multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome
- p.Gln103Ter Single submitter
- p.Gln357Ter Single submitter
- p.Ile172fs Single submitter multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome
- p.Lys303fs Single submitter
Pathogenic/Likely pathogenic 2
- p.Arg64Ter Multiple submitters multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome
- p.Tyr269Ter No assertion criteria CEP55-related disorder
Likely pathogenic 2
- p.Gln183Ter Single submitter multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome
- p.Glu383Ter Single submitter Abnormality of prenatal development or birth
Conflicting classifications of pathogenicity 3
- p.Arg298Lys Single submitter ⚠
- p.Arg419Lys Single submitter Inborn genetic diseases ⚠
- p.Glu61Lys Single submitter Inborn genetic diseases ⚠
Benign 16
- c.1191+89A>G Multiple submitters multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome
- c.680-19G>A Multiple submitters
- p.Ala244Pro Multiple submitters ⚠
- p.Ala424= Multiple submitters
- p.Ala68= Multiple submitters
- p.Arg348Lys Multiple submitters
- p.Cys236Arg Multiple submitters
- p.Gly227Asp Multiple submitters
- p.His378Leu Multiple submitters multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome
- p.His57Gln Multiple submitters
- p.Ile172Val Multiple submitters
- p.Leu59Phe Multiple submitters ⚠
- p.Thr98= Multiple submitters
- p.Asp53= Single submitter
- p.His214Arg Single submitter
- p.Thr99= Single submitter
Benign/Likely benign 1
- c.1065+11G>A Multiple submitters
Likely benign 20
- c.1065+10C>T Single submitter
- c.993+12C>T Single submitter
- p.Ala135Thr Single submitter Inborn genetic diseases ⚠
- p.Ala423= Single submitter
- p.Ala431= Single submitter
- p.Arg150His Single submitter Inborn genetic diseases
- p.Arg453= Single submitter
- p.Asp126= Single submitter
- p.Gln90= Single submitter
- p.Glu321Lys Single submitter ⚠
- p.Leu433= Single submitter
- p.Lys80= Single submitter
- p.Phe160= Single submitter
- p.Ser263Asn Single submitter
- p.Thr154= Single submitter
- p.Thr26= Single submitter
- p.Thr99Ala Single submitter
- p.Tyr284Cys Single submitter Inborn genetic diseases
- p.Val186Met Single submitter
- p.Glu79= No assertion criteria CEP55-related disorder
Uncertain significance 71
- p.Arg385Gln Multiple submitters Inborn genetic diseases ⚠
- p.His293Arg Multiple submitters Inborn genetic diseases ⚠
- p.Pro426Arg Multiple submitters multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome ⚠
- p.Ser2Phe Multiple submitters Inborn genetic diseases ⚠
- p.Val127Ile Multiple submitters multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome ⚠
- p.Val379Ala Multiple submitters Inborn genetic diseases ⚠
- c.1192-5T>A Single submitter
- p.Ala242Ser Single submitter Inborn genetic diseases ⚠
- p.Ala358Glu Single submitter Inborn genetic diseases ⚠
- p.Ala424Thr Single submitter Inborn genetic diseases ⚠
- p.Ala68Gly Single submitter Inborn genetic diseases ⚠
- p.Arg266Gln Single submitter Inborn genetic diseases ⚠
- p.Arg315Thr Single submitter ⚠
- p.Arg370Cys Single submitter ⚠
- p.Arg370His Single submitter Inborn genetic diseases ⚠
- p.Arg58Ile Single submitter Inborn genetic diseases ⚠
- p.Arg86Gln Single submitter Inborn genetic diseases ⚠
- p.Arg86Leu Single submitter Inborn genetic diseases ⚠
- p.Asn147Ser Single submitter ⚠
- p.Asn434Ser Single submitter Inborn genetic diseases ⚠
- p.Asn444Ser Single submitter Inborn genetic diseases ⚠
- p.Asp239Asn Single submitter ⚠
- p.Asp369Asn Single submitter Inborn genetic diseases ⚠
- p.Asp81Gly Single submitter ⚠
- p.Asp8Asn Single submitter Inborn genetic diseases ⚠
- p.Asp8Tyr Single submitter multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome ⚠
- p.Cys359Gly Single submitter Inborn genetic diseases ⚠
- p.Gln218Arg Single submitter Inborn genetic diseases ⚠
- p.Gln342His Single submitter Inborn genetic diseases ⚠
- p.Glu24Lys Single submitter multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome ⚠
- p.Glu326Lys Single submitter Inborn genetic diseases ⚠
- p.Glu364Gly Single submitter Inborn genetic diseases ⚠
- p.Glu407Gly Single submitter Inborn genetic diseases ⚠
- p.Glu451Asp Single submitter Inborn genetic diseases ⚠
- p.Gly32Arg Single submitter Inborn genetic diseases ⚠
- p.His299Tyr Single submitter Inborn genetic diseases ⚠
- p.His458Arg Single submitter multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome ⚠
- p.Ile10Thr Single submitter Inborn genetic diseases ⚠
- p.Ile139Thr Single submitter Inborn genetic diseases ⚠
- p.Ile167Val Single submitter Inborn genetic diseases ⚠
- p.Ile172Thr Single submitter Inborn genetic diseases ⚠
- p.Ile304Leu Single submitter encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1 ⚠
- p.Ile304Thr Single submitter Inborn genetic diseases ⚠
- p.Leu229Val Single submitter Inborn genetic diseases ⚠
- p.Lys233Gln Single submitter Inborn genetic diseases ⚠
- p.Lys303Glu Single submitter Inborn genetic diseases ⚠
- p.Phe203Val Single submitter Inborn genetic diseases ⚠
- p.Pro18Ser Single submitter Inborn genetic diseases ⚠
- p.Pro448Ala Single submitter Inborn genetic diseases ⚠
- p.Ser12Asn Single submitter Inborn genetic diseases ⚠
- p.Ser133Ala Single submitter Inborn genetic diseases ⚠
- p.Ser16Leu Single submitter Inborn genetic diseases ⚠
- p.Ser19Gly Single submitter Inborn genetic diseases ⚠
- p.Ser285Pro Single submitter Inborn genetic diseases ⚠
- p.Ser436Gly Single submitter Inborn genetic diseases ⚠
- p.Thr108Met Single submitter Inborn genetic diseases ⚠
- p.Thr136Ala Single submitter Inborn genetic diseases ⚠
- p.Thr148Ile Single submitter Inborn genetic diseases ⚠
- p.Thr209Met Single submitter ⚠
- p.Thr6Ser Single submitter Inborn genetic diseases ⚠
- p.Thr97Ile Single submitter Inborn genetic diseases ⚠
- p.Thr99Lys Single submitter Inborn genetic diseases ⚠
- p.Tyr194Asp Single submitter Inborn genetic diseases ⚠
- p.Tyr194Cys Single submitter Inborn genetic diseases ⚠
- p.Tyr228His Single submitter Inborn genetic diseases ⚠
- p.Tyr269Cys Single submitter Inborn genetic diseases ⚠
- p.Tyr269Phe Single submitter Inborn genetic diseases ⚠
- p.Tyr75His Single submitter Inborn genetic diseases ⚠
- p.Tyr95Cys Single submitter Inborn genetic diseases ⚠
- p.Val127Leu Single submitter ⚠
- p.Arg191Trp No assertion criteria CEP55-related disorder ⚠