CERS1 — 314 ClinVar variants

All ClinVar germline CERS1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 139 flagged for review →

2 Pathogenic · 1 Likely pathogenic · 4 Conflicting · 2 Benign · 1 Benign/Likely benign · 152 Likely benign · 152 Uncertain significance

Full CERS1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 139

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 2

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 78

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 59

The independent predictors disagree with each other — read with care.

All CERS1 variants

Pathogenic 2

  • p.Cys90fs Single submitter progressive myoclonic epilepsy type 8
  • p.His183Gln No assertion criteria progressive myoclonic epilepsy type 8

Likely pathogenic 1

  • c.*1120G>A Single submitter congenital heart defects, multiple types, 6

Conflicting classifications of pathogenicity 4

  • p.Ala72Thr Single submitter progressive myoclonic epilepsy type 8 ⚠
  • p.Arg255Cys Single submitter progressive myoclonic epilepsy type 8 ⚠
  • p.Pro6Thr Single submitter progressive myoclonic epilepsy type 8 ⚠
  • p.Val191Ile Single submitter progressive myoclonic epilepsy type 8 ⚠

Benign 2

  • c.*151G>T Multiple submitters
  • c.591-3del Single submitter progressive myoclonic epilepsy type 8

Benign/Likely benign 1

  • p.Ala150= Multiple submitters progressive myoclonic epilepsy type 8

Likely benign 152

  • p.Ala143= Multiple submitters progressive myoclonic epilepsy type 8
  • p.Ala239= Multiple submitters progressive myoclonic epilepsy type 8
  • p.Leu300= Multiple submitters progressive myoclonic epilepsy type 8
  • p.Lys98= Multiple submitters progressive myoclonic epilepsy type 8
  • p.Tyr194= Multiple submitters progressive myoclonic epilepsy type 8
  • c.1010+10G>A Single submitter progressive myoclonic epilepsy type 8
  • c.1010+18C>T Single submitter progressive myoclonic epilepsy type 8
  • c.1010+19G>A Single submitter progressive myoclonic epilepsy type 8
  • c.1010+7G>A Single submitter progressive myoclonic epilepsy type 8
  • c.1011-16C>T Single submitter progressive myoclonic epilepsy type 8
  • c.1011-4C>G Single submitter progressive myoclonic epilepsy type 8
  • c.1011-4C>T Single submitter progressive myoclonic epilepsy type 8
  • c.1011-5C>T Single submitter progressive myoclonic epilepsy type 8
  • c.1011-8del Single submitter progressive myoclonic epilepsy type 8
  • c.249+12C>T Single submitter progressive myoclonic epilepsy type 8
  • c.249+14G>T Single submitter progressive myoclonic epilepsy type 8
  • c.249+19C>T Single submitter progressive myoclonic epilepsy type 8
  • c.249+7G>A Single submitter progressive myoclonic epilepsy type 8
  • c.250-15T>C Single submitter progressive myoclonic epilepsy type 8
  • c.250-20G>T Single submitter progressive myoclonic epilepsy type 8
  • c.250-4A>G Single submitter progressive myoclonic epilepsy type 8
  • c.409+7G>T Single submitter progressive myoclonic epilepsy type 8
  • c.409+9C>T Single submitter progressive myoclonic epilepsy type 8
  • c.410-10C>T Single submitter progressive myoclonic epilepsy type 8
  • c.410-17G>T Single submitter progressive myoclonic epilepsy type 8
  • c.410-20_410-19del Single submitter progressive myoclonic epilepsy type 8
  • c.410-6C>T Single submitter progressive myoclonic epilepsy type 8
  • c.590+11G>C Single submitter progressive myoclonic epilepsy type 8
  • c.590+14C>G Single submitter progressive myoclonic epilepsy type 8
  • c.590+14C>T Single submitter progressive myoclonic epilepsy type 8
  • c.590+15G>A Single submitter progressive myoclonic epilepsy type 8
  • c.590+9A>G Single submitter progressive myoclonic epilepsy type 8
  • c.591-10G>T Single submitter progressive myoclonic epilepsy type 8
  • c.591-15C>G Single submitter progressive myoclonic epilepsy type 8
  • c.591-15C>T Single submitter progressive myoclonic epilepsy type 8
  • c.591-19del Single submitter progressive myoclonic epilepsy type 8
  • c.591-6C>T Single submitter progressive myoclonic epilepsy type 8
  • c.591-8T>A Single submitter progressive myoclonic epilepsy type 8
  • c.752+9T>C Single submitter progressive myoclonic epilepsy type 8
  • c.753-10C>G Single submitter progressive myoclonic epilepsy type 8
  • c.753-15C>A Single submitter progressive myoclonic epilepsy type 8
  • c.753-17G>A Single submitter progressive myoclonic epilepsy type 8
  • c.753-18T>G Single submitter progressive myoclonic epilepsy type 8
  • c.753-4G>A Single submitter progressive myoclonic epilepsy type 8
  • c.900+11C>T Single submitter progressive myoclonic epilepsy type 8
  • c.900+13C>T Single submitter progressive myoclonic epilepsy type 8
  • c.900+14G>A Single submitter progressive myoclonic epilepsy type 8
  • c.900+20C>T Single submitter progressive myoclonic epilepsy type 8
  • c.900+7C>T Single submitter progressive myoclonic epilepsy type 8
  • c.900+8G>A Single submitter progressive myoclonic epilepsy type 8
  • c.901-11C>A Single submitter progressive myoclonic epilepsy type 8
  • c.901-17C>G Single submitter progressive myoclonic epilepsy type 8
  • c.901-4G>A Single submitter progressive myoclonic epilepsy type 8
  • c.901-6T>A Single submitter progressive myoclonic epilepsy type 8
  • c.901-8T>C Single submitter progressive myoclonic epilepsy type 8
  • p.Ala2= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala266= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala286= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala3= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala304= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala326= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala326= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala328= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala33= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala336= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala34= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala4= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala53= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala64= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala86= Single submitter progressive myoclonic epilepsy type 8
  • p.Ala96= Single submitter progressive myoclonic epilepsy type 8
  • p.Arg173= Single submitter progressive myoclonic epilepsy type 8
  • p.Arg228= Single submitter progressive myoclonic epilepsy type 8
  • p.Arg234= Single submitter progressive myoclonic epilepsy type 8
  • p.Arg74= Single submitter progressive myoclonic epilepsy type 8
  • p.Arg83Gln Single submitter progressive myoclonic epilepsy type 8
  • p.Arg88= Single submitter progressive myoclonic epilepsy type 8
  • p.Asp210= Single submitter progressive myoclonic epilepsy type 8
  • p.Cys244= Single submitter progressive myoclonic epilepsy type 8
  • p.Gly141= Single submitter progressive myoclonic epilepsy type 8
  • p.Gly229= Single submitter progressive myoclonic epilepsy type 8
  • p.Gly26= Single submitter progressive myoclonic epilepsy type 8
  • p.Gly41= Single submitter progressive myoclonic epilepsy type 8
  • p.Gly5= Single submitter progressive myoclonic epilepsy type 8
  • p.Gly66= Single submitter progressive myoclonic epilepsy type 8
  • p.His129= Single submitter progressive myoclonic epilepsy type 8
  • p.His183= Single submitter progressive myoclonic epilepsy type 8
  • p.His209= Single submitter progressive myoclonic epilepsy type 8
  • p.His315= Single submitter progressive myoclonic epilepsy type 8
  • p.His52= Single submitter progressive myoclonic epilepsy type 8
  • p.Ile190= Single submitter progressive myoclonic epilepsy type 8
  • p.Ile203= Single submitter progressive myoclonic epilepsy type 8
  • p.Ile278= Single submitter progressive myoclonic epilepsy type 8
  • p.Ile302= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu180= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu189= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu204= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu22= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu221= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu256= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu264= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu272= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu289= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu291= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu317= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu320= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu344= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu60= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu61= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu65= Single submitter progressive myoclonic epilepsy type 8
  • p.Leu91= Single submitter progressive myoclonic epilepsy type 8
  • p.Lys174= Single submitter progressive myoclonic epilepsy type 8
  • p.Lys308= Single submitter progressive myoclonic epilepsy type 8
  • p.Lys332= Single submitter progressive myoclonic epilepsy type 8
  • p.Phe280= Single submitter progressive myoclonic epilepsy type 8
  • p.Phe282= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro10= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro13= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro131= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro140= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro140= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro15= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro17= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro260= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro333= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro57= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro58= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro6= Single submitter progressive myoclonic epilepsy type 8
  • p.Pro84= Single submitter progressive myoclonic epilepsy type 8
  • p.Ser102= Single submitter progressive myoclonic epilepsy type 8
  • p.Ser176= Single submitter progressive myoclonic epilepsy type 8
  • p.Ser193= Single submitter progressive myoclonic epilepsy type 8
  • p.Ser250= Single submitter progressive myoclonic epilepsy type 8
  • p.Ser330= Single submitter progressive myoclonic epilepsy type 8
  • p.Thr123= Single submitter progressive myoclonic epilepsy type 8
  • p.Thr139= Single submitter progressive myoclonic epilepsy type 8
  • p.Thr166= Single submitter progressive myoclonic epilepsy type 8
  • p.Thr186= Single submitter progressive myoclonic epilepsy type 8
  • p.Thr274Ala Single submitter
  • p.Thr292= Single submitter progressive myoclonic epilepsy type 8
  • p.Thr78= Single submitter progressive myoclonic epilepsy type 8
  • p.Tyr125= Single submitter progressive myoclonic epilepsy type 8
  • p.Tyr159= Single submitter progressive myoclonic epilepsy type 8
  • p.Tyr198= Single submitter progressive myoclonic epilepsy type 8
  • p.Val134= Single submitter progressive myoclonic epilepsy type 8
  • p.Val144= Single submitter progressive myoclonic epilepsy type 8
  • p.Val177= Single submitter progressive myoclonic epilepsy type 8
  • p.Val178= Single submitter progressive myoclonic epilepsy type 8
  • p.Val214= Single submitter progressive myoclonic epilepsy type 8
  • p.Val314= Single submitter progressive myoclonic epilepsy type 8
  • p.Val345= Single submitter progressive myoclonic epilepsy type 8
  • p.Gly243= No assertion criteria CERS1-related disorder

Uncertain significance 152