CFL2 — 154 ClinVar variants
All ClinVar germline CFL2 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 49 flagged for review →
6 Pathogenic · 1 Likely pathogenic · 3 Conflicting · 18 Benign · 2 Benign/Likely benign · 44 Likely benign · 80 Uncertain significance
Full CFL2 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 49
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 1
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
-
CFL2 p.Arg81Gln
Conflicting
Single submitter
nemaline myopathy 7
Predictors lean, ClinVar uncertain 31
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
CFL2 p.Leu153Val
Uncertain significance
Multiple submitters
nemaline myopathy 7
-
CFL2 p.Lys31Asn
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
CFL2 p.Ser94Phe
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
CFL2 p.Thr25Ile
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
CFL2 p.Val57Met
Uncertain significance
Multiple submitters
nemaline myopathy 7
-
CFL2 p.Ala118Gly
Uncertain significance
Single submitter
nemaline myopathy 7
- CFL2 p.Asn156Lys Uncertain significance Single submitter
-
CFL2 p.Asn156Ser
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Asn8Asp
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Asp17Glu
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Asp59Gly
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Asp86Asn
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Cys39Tyr
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Gln26Glu
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Gly130Arg
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Leu166Ser
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Lys13Arg
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Lys13Gln
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Lys19Glu
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Lys33Gln
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Phe101Leu
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Phe38Leu
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Pro106Thr
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Ser119Cys
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Ser147Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
CFL2 p.Ser24Ala
Uncertain significance
Single submitter
nemaline myopathy 7
- CFL2 p.Thr25Arg Uncertain significance Single submitter
-
CFL2 p.Thr6Arg
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Tyr68Cys
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Val159Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
CFL2 p.Val7Met
Uncertain significance
Single submitter
nemaline myopathy 7
Predictors split 17
The independent predictors disagree with each other — read with care.
-
CFL2 p.Met18Ile
Uncertain significance
Multiple submitters
nemaline myopathy 7
-
CFL2 p.Thr25Ala
Uncertain significance
Multiple submitters
nemaline myopathy 7
- CFL2 p.Ala83Val Uncertain significance Single submitter
-
CFL2 p.Asp42Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
CFL2 p.Asp43Asn
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Glu151Gly
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Glu51Lys
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Glu90Lys
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.His133Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
CFL2 p.Ile102Val
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Leu77Arg
Uncertain significance
Single submitter
nemaline myopathy 7
- CFL2 p.Lys127Arg Uncertain significance Single submitter
-
CFL2 p.Lys92Asn
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Pro110Ser
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Val157Ile
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Val159Phe
Uncertain significance
Single submitter
nemaline myopathy 7
-
CFL2 p.Val20Leu
Uncertain significance
Single submitter
nemaline myopathy 7
All CFL2 variants
Pathogenic 6
- p.Lys34fs Multiple submitters CFL2-related disorder
- c.4-115A>C Single submitter nemaline myopathy 7
- c.4-115A>G Single submitter nemaline myopathy 7
- p.Ala52fs Single submitter nemaline myopathy 7
- p.Ser113fs Single submitter nemaline myopathy 7
- p.Ala35Thr No assertion criteria nemaline myopathy 7
Likely pathogenic 1
- p.Leu40Ter Single submitter
Conflicting classifications of pathogenicity 3
- c.*1036G>A Single submitter nemaline myopathy 7
- p.Arg81Gln Single submitter nemaline myopathy 7 ⚠
- p.Val7= Single submitter nemaline myopathy 7
Benign 18
- c.3+196G>T Multiple submitters
- c.3+234G>A Multiple submitters
- c.3+99C>T Multiple submitters
- c.312-18dup Multiple submitters nemaline myopathy 7
- c.312-7del Multiple submitters nemaline myopathy 7
- c.4-446A>G Multiple submitters
- c.-1105C>A Multiple submitters
- c.*1682A>T Multiple submitters nemaline myopathy 7
- c.*2038G>T Multiple submitters nemaline myopathy 7
- c.*285A>G Multiple submitters nemaline myopathy 7
- c.*925T>C Multiple submitters nemaline myopathy 7
- c.311+45TAT[2] Single submitter
- c.312-8_312-7del Single submitter nemaline myopathy 7
- c.-1346G>A Single submitter
- c.-1364A>G Single submitter
- c.-1441A>G Single submitter
- c.*1905A>G Single submitter nemaline myopathy 7
- c.*409T>G Single submitter nemaline myopathy 7
Benign/Likely benign 2
Likely benign 44
- p.Asp66= Multiple submitters nemaline myopathy 7
- p.Ser147= Multiple submitters nemaline myopathy 7
- p.Tyr85= Multiple submitters nemaline myopathy 7
- p.Tyr89= Multiple submitters nemaline myopathy 7
- c.3+328G>A Single submitter
- c.311+15A>G Single submitter nemaline myopathy 7
- c.311+18A>G Single submitter
- c.312-12T>G Single submitter nemaline myopathy 7
- c.312-14T>A Single submitter nemaline myopathy 7
- c.312-17T>C Single submitter nemaline myopathy 7
- c.312-19A>T Single submitter nemaline myopathy 7
- c.388+17T>C Single submitter nemaline myopathy 7
- c.389-15G>C Single submitter nemaline myopathy 7
- c.389-4T>C Single submitter nemaline myopathy 7
- c.389-8C>T Single submitter nemaline myopathy 7
- c.389-8del Single submitter nemaline myopathy 7
- c.389-9del Single submitter nemaline myopathy 7
- c.389-9T>C Single submitter nemaline myopathy 7
- c.4-12_4-11del Single submitter nemaline myopathy 7
- c.4-12G>A Single submitter nemaline myopathy 7
- c.4-14G>T Single submitter nemaline myopathy 7
- c.4-161C>G Single submitter
- c.4-17dup Single submitter nemaline myopathy 7
- c.4-20T>C Single submitter nemaline myopathy 7
- c.4-38del Single submitter
- c.4-95A>G Single submitter nemaline myopathy 7
- c.*1268C>T Single submitter nemaline myopathy 7
- c.*40A>G Single submitter nemaline myopathy 7
- c.*605T>C Single submitter nemaline myopathy 7
- c.*671C>T Single submitter nemaline myopathy 7
- c.*905A>G Single submitter nemaline myopathy 7
- p.Arg32= Single submitter nemaline myopathy 7
- p.Asp17= Single submitter nemaline myopathy 7
- p.Asp42= Single submitter nemaline myopathy 7
- p.Gln136= Single submitter nemaline myopathy 7
- p.Leu140= Single submitter nemaline myopathy 7
- p.Lys164= Single submitter nemaline myopathy 7
- p.Lys92= Single submitter nemaline myopathy 7
- p.Phe128= Single submitter nemaline myopathy 7
- p.Pro165= Single submitter nemaline myopathy 7
- p.Ser119= Single submitter nemaline myopathy 7
- p.Ser120= Single submitter nemaline myopathy 7
- p.Thr91= Single submitter nemaline myopathy 7
- p.Val49= Single submitter nemaline myopathy 7
Uncertain significance 80
- c.4-172C>T Multiple submitters nemaline myopathy 7
- c.*1507C>T Multiple submitters nemaline myopathy 7
- c.*1759A>G Multiple submitters nemaline myopathy 7
- p.Leu153Val Multiple submitters nemaline myopathy 7 ⚠
- p.Lys31Asn Multiple submitters Inborn genetic diseases ⚠
- p.Met18Ile Multiple submitters nemaline myopathy 7 ⚠
- p.Ser94Phe Multiple submitters Inborn genetic diseases ⚠
- p.Thr25Ala Multiple submitters nemaline myopathy 7 ⚠
- p.Thr25Ile Multiple submitters Inborn genetic diseases ⚠
- p.Val57Met Multiple submitters nemaline myopathy 7 ⚠
- c.312-3T>G Single submitter nemaline myopathy 7
- c.4-113G>A Single submitter
- c.4-198A>G Single submitter nemaline myopathy 7
- c.*1030C>G Single submitter nemaline myopathy 7
- c.*1070G>A Single submitter nemaline myopathy 7
- c.*1620T>C Single submitter nemaline myopathy 7
- c.*1810T>A Single submitter nemaline myopathy 7
- c.*1885C>T Single submitter nemaline myopathy 7
- c.*1886G>A Single submitter nemaline myopathy 7
- c.*2248G>A Single submitter nemaline myopathy 7
- c.*2284C>T Single submitter nemaline myopathy 7
- c.*2340T>G Single submitter nemaline myopathy 7
- c.*281A>G Single submitter nemaline myopathy 7
- c.*293G>A Single submitter nemaline myopathy 7
- c.*362G>A Single submitter nemaline myopathy 7
- c.*473A>G Single submitter nemaline myopathy 7
- c.*541A>G Single submitter nemaline myopathy 7
- c.*718A>G Single submitter nemaline myopathy 7
- c.*720A>T Single submitter nemaline myopathy 7
- c.*738A>G Single submitter nemaline myopathy 7
- c.*995T>C Single submitter nemaline myopathy 7
- p.Ala109= Single submitter nemaline myopathy 7
- p.Ala118Gly Single submitter nemaline myopathy 7 ⚠
- p.Ala83Val Single submitter ⚠
- p.Asn156Lys Single submitter ⚠
- p.Asn156Ser Single submitter nemaline myopathy 7 ⚠
- p.Asn8Asp Single submitter nemaline myopathy 7 ⚠
- p.Asp17Glu Single submitter nemaline myopathy 7 ⚠
- p.Asp42Asn Single submitter Inborn genetic diseases ⚠
- p.Asp43Asn Single submitter nemaline myopathy 7 ⚠
- p.Asp59Gly Single submitter nemaline myopathy 7 ⚠
- p.Asp86Asn Single submitter nemaline myopathy 7 ⚠
- p.Asp9del Single submitter nemaline myopathy 7
- p.Asp9Ile Single submitter nemaline myopathy 7
- p.Cys39Tyr Single submitter nemaline myopathy 7 ⚠
- p.Gln26Glu Single submitter nemaline myopathy 7 ⚠
- p.Glu151Gly Single submitter nemaline myopathy 7 ⚠
- p.Glu28del Single submitter nemaline myopathy 7
- p.Glu51Lys Single submitter nemaline myopathy 7 ⚠
- p.Glu90Lys Single submitter nemaline myopathy 7 ⚠
- p.Gly130Arg Single submitter nemaline myopathy 7 ⚠
- p.His133Arg Single submitter Inborn genetic diseases ⚠
- p.Ile102Val Single submitter nemaline myopathy 7 ⚠
- p.Leu166Ser Single submitter nemaline myopathy 7 ⚠
- p.Leu77Arg Single submitter nemaline myopathy 7 ⚠
- p.Lys127Arg Single submitter ⚠
- p.Lys13Arg Single submitter nemaline myopathy 7 ⚠
- p.Lys13Gln Single submitter nemaline myopathy 7 ⚠
- p.Lys19Glu Single submitter nemaline myopathy 7 ⚠
- p.Lys33Gln Single submitter nemaline myopathy 7 ⚠
- p.Lys92Asn Single submitter nemaline myopathy 7 ⚠
- p.Phe101Leu Single submitter nemaline myopathy 7 ⚠
- p.Phe38Leu Single submitter nemaline myopathy 7 ⚠
- p.Pro106Thr Single submitter nemaline myopathy 7 ⚠
- p.Pro110Ser Single submitter nemaline myopathy 7 ⚠
- p.Ser119Cys Single submitter nemaline myopathy 7 ⚠
- p.Ser147Leu Single submitter Inborn genetic diseases ⚠
- p.Ser24Ala Single submitter nemaline myopathy 7 ⚠
- p.Ser24del Single submitter nemaline myopathy 7
- p.Ter167= Single submitter nemaline myopathy 7
- p.Thr25Arg Single submitter ⚠
- p.Thr6Arg Single submitter nemaline myopathy 7 ⚠
- p.Tyr117fs Single submitter nemaline myopathy 7
- p.Tyr68Cys Single submitter nemaline myopathy 7 ⚠
- p.Val157Ile Single submitter nemaline myopathy 7 ⚠
- p.Val159del Single submitter nemaline myopathy 7
- p.Val159Ile Single submitter Inborn genetic diseases ⚠
- p.Val159Phe Single submitter nemaline myopathy 7 ⚠
- p.Val20Leu Single submitter nemaline myopathy 7 ⚠
- p.Val7Met Single submitter nemaline myopathy 7 ⚠