CITED2 — 91 ClinVar variants
All ClinVar germline CITED2 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 60 flagged for review →
1 Likely pathogenic · 1 Conflicting · 8 Benign · 3 Benign/Likely benign · 8 Likely benign · 70 Uncertain significance
Full CITED2 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 60
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors lean, ClinVar uncertain 30
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
CITED2 p.Ala25Pro
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
CITED2 p.Pro128Ser
Uncertain significance
Multiple submitters
Inborn genetic diseases
- CITED2 p.Ala141Thr Uncertain significance Single submitter
-
CITED2 p.Ala203Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Ala206Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Ala211Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Ala65Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Ala91Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Ala91Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Asn147Thr
Uncertain significance
Single submitter
Inborn genetic diseases
- CITED2 p.Asp224Gly Uncertain significance Single submitter
-
CITED2 p.Cys156Gly
Uncertain significance
Single submitter
Inborn genetic diseases
- CITED2 p.Gly108Val Uncertain significance Single submitter
-
CITED2 p.Gly188Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.His139Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Ile233Val
Uncertain significance
Single submitter
ventricular septal defect 2
-
CITED2 p.Ile56Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Met135Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Met201Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Met5Thr
Uncertain significance
Single submitter
Inborn genetic diseases
- CITED2 p.Met99Leu Uncertain significance Single submitter
-
CITED2 p.Met99Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Pro128Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Pro130Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Pro130Ser
Uncertain significance
Single submitter
ventricular septal defect 2
-
CITED2 p.Pro83Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Pro89Ala
Uncertain significance
Single submitter
Inborn genetic diseases
- CITED2 p.Ser35Thr Uncertain significance Single submitter
- CITED2 p.Val232Met Uncertain significance Single submitter
-
CITED2 p.Pro84Ser
Uncertain significance
No assertion criteria
CITED2-related disorder
Predictors split 30
The independent predictors disagree with each other — read with care.
-
CITED2 p.Ala25Val
Uncertain significance
Multiple submitters
Inborn genetic diseases
- CITED2 p.Ala7Pro Uncertain significance Single submitter
-
CITED2 p.Ala7Val
Uncertain significance
Single submitter
Inborn genetic diseases
- CITED2 p.Arg27Leu Uncertain significance Single submitter
-
CITED2 p.Arg27Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Asp221Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Gly178Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Gly194Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Gly197Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Gly53Asp
Uncertain significance
Single submitter
Inborn genetic diseases
- CITED2 p.His10Tyr Uncertain significance Single submitter
-
CITED2 p.His21Gln
Uncertain significance
Single submitter
Inborn genetic diseases
- CITED2 p.His26Asp Uncertain significance Single submitter
-
CITED2 p.His37Arg
Uncertain significance
Single submitter
Inborn genetic diseases
- CITED2 p.Met146Lys Uncertain significance Single submitter
-
CITED2 p.Met229Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Phe153Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Phe93Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Phe98Leu
Uncertain significance
Single submitter
Inborn genetic diseases
- CITED2 p.Pro130Arg Uncertain significance Single submitter
-
CITED2 p.Pro136Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Pro136Gln
Uncertain significance
Single submitter
Inborn genetic diseases
- CITED2 p.Pro140Arg Uncertain significance Single submitter
-
CITED2 p.Pro24Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Ser165Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Ser266Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
CITED2 p.Thr149Ile
Uncertain significance
Single submitter
CITED2-related disorder
- CITED2 p.Thr175Ile Uncertain significance Single submitter
- CITED2 p.Met5Val Uncertain significance No assertion criteria
- CITED2 p.Ser181Thr Likely benign No assertion criteria
All CITED2 variants
Likely pathogenic 1
- p.Glu234Ala Single submitter atrial septal defect 8
Conflicting classifications of pathogenicity 1
- p.His39del Single submitter atrial septal defect 8
Benign 8
- p.Ala7= Multiple submitters
- c.-24A>T Single submitter
- c.-8-97C>T Single submitter
- c.-91G>A Single submitter
- p.Asp219= Single submitter
- p.His4= Single submitter
- p.Ser170= Single submitter
- p.Ser192_Gly193del Single submitter
Benign/Likely benign 3
- p.Gly194= Multiple submitters
- p.His160Leu Multiple submitters
- p.Ser192Gly Multiple submitters
Likely benign 8
- p.196SG[1] Multiple submitters ventricular septal defect 2
- p.His46= Multiple submitters
- p.Asn9= Single submitter
- p.Phe259= Single submitter
- p.Pro167= Single submitter
- p.Pro209= Single submitter
- c.-8-187T>C No assertion criteria CITED2-related disorder
- p.Ser181Thr No assertion criteria ⚠
Uncertain significance 70
- p.Ala25Pro Multiple submitters Inborn genetic diseases ⚠
- p.Ala25Val Multiple submitters Inborn genetic diseases ⚠
- p.Pro128Ser Multiple submitters Inborn genetic diseases ⚠
- c.-218C>T Single submitter
- c.-8-179G>C Single submitter CITED2-related disorder
- p.163GSSTPGGSG[1] Single submitter ventricular septal defect 2
- p.Ala141Thr Single submitter ⚠
- p.Ala203Val Single submitter Inborn genetic diseases ⚠
- p.Ala206Val Single submitter Inborn genetic diseases ⚠
- p.Ala211Thr Single submitter Inborn genetic diseases ⚠
- p.Ala65Ser Single submitter Inborn genetic diseases ⚠
- p.Ala7Pro Single submitter ⚠
- p.Ala7Val Single submitter Inborn genetic diseases ⚠
- p.Ala91Gly Single submitter Inborn genetic diseases ⚠
- p.Ala91Ser Single submitter Inborn genetic diseases ⚠
- p.Arg27Leu Single submitter ⚠
- p.Arg27Pro Single submitter Inborn genetic diseases ⚠
- p.Asn147Thr Single submitter Inborn genetic diseases ⚠
- p.Asp221Glu Single submitter Inborn genetic diseases ⚠
- p.Asp224Gly Single submitter ⚠
- p.Cys156Gly Single submitter Inborn genetic diseases ⚠
- p.Gln264dup Single submitter
- p.Gln43del Single submitter atrial septal defect 8
- p.Glu252Ter Single submitter atrial septal defect 8
- p.Gly108Val Single submitter ⚠
- p.Gly178Val Single submitter Inborn genetic diseases ⚠
- p.Gly180_Ser181insGlySerSerThrProGlyGlySerGly Single submitter ventricular septal defect 2
- p.Gly185_Gly186insSerSerThrProGlyGlySerGlySerSerSerGlyGly Single submitter CITED2-related disorder
- p.Gly188Ser Single submitter Inborn genetic diseases ⚠
- p.Gly194_Gly197del Single submitter
- p.Gly194Asp Single submitter Inborn genetic diseases ⚠
- p.Gly197Arg Single submitter Inborn genetic diseases ⚠
- p.Gly53Asp Single submitter Inborn genetic diseases ⚠
- p.His10Tyr Single submitter ⚠
- p.His139Pro Single submitter Inborn genetic diseases ⚠
- p.His144_Gln145del Single submitter
- p.His21Gln Single submitter Inborn genetic diseases ⚠
- p.His26Asp Single submitter ⚠
- p.His37Arg Single submitter Inborn genetic diseases ⚠
- p.Ile233Val Single submitter ventricular septal defect 2 ⚠
- p.Ile56Val Single submitter Inborn genetic diseases ⚠
- p.Leu228del Single submitter
- p.Met135Ile Single submitter Inborn genetic diseases ⚠
- p.Met146Lys Single submitter ⚠
- p.Met201Leu Single submitter Inborn genetic diseases ⚠
- p.Met229Thr Single submitter Inborn genetic diseases ⚠
- p.Met5Thr Single submitter Inborn genetic diseases ⚠
- p.Met99Leu Single submitter ⚠
- p.Met99Thr Single submitter Inborn genetic diseases ⚠
- p.Phe153Leu Single submitter Inborn genetic diseases ⚠
- p.Phe93Leu Single submitter Inborn genetic diseases ⚠
- p.Phe98Leu Single submitter Inborn genetic diseases ⚠
- p.Pro128Leu Single submitter Inborn genetic diseases ⚠
- p.Pro130Ala Single submitter Inborn genetic diseases ⚠
- p.Pro130Arg Single submitter ⚠
- p.Pro130Ser Single submitter ventricular septal defect 2 ⚠
- p.Pro136Arg Single submitter Inborn genetic diseases ⚠
- p.Pro136Gln Single submitter Inborn genetic diseases ⚠
- p.Pro140Arg Single submitter ⚠
- p.Pro24Ser Single submitter Inborn genetic diseases ⚠
- p.Pro83Ser Single submitter Inborn genetic diseases ⚠
- p.Pro89Ala Single submitter Inborn genetic diseases ⚠
- p.Ser165Arg Single submitter Inborn genetic diseases ⚠
- p.Ser266Asn Single submitter Inborn genetic diseases ⚠
- p.Ser35Thr Single submitter ⚠
- p.Thr149Ile Single submitter CITED2-related disorder ⚠
- p.Thr175Ile Single submitter ⚠
- p.Val232Met Single submitter ⚠
- p.Met5Val No assertion criteria ⚠
- p.Pro84Ser No assertion criteria CITED2-related disorder ⚠