COG6 — 445 ClinVar variants
All ClinVar germline COG6 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 149 flagged for review →
16 Pathogenic · 5 Pathogenic/Likely pathogenic · 19 Likely pathogenic · 16 Conflicting · 76 Benign · 8 Benign/Likely benign · 105 Likely benign · 200 Uncertain significance
Full COG6 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 149
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors vs ClinVar 1
ClinVar calls these pathogenic, but the computational predictors lean tolerated — the highest-value review flag.
-
COG6 p.Tyr262Cys
Likely pathogenic
Single submitter
COG6-congenital disorder of glycosylation
Predictors agree, ClinVar conflicts 3
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
-
COG6 p.Arg587Cys
Conflicting
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Lys82Arg
Conflicting
Single submitter
hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
-
COG6 p.Ser120Gly
Conflicting
Single submitter
COG6-congenital disorder of glycosylation
Predictors lean, ClinVar uncertain 121
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
COG6 p.Ala13Thr
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Arg466His
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Arg587His
Uncertain significance
Multiple submitters
Inborn genetic diseases
- COG6 p.Arg81Ser Uncertain significance Multiple submitters
-
COG6 p.Asn18Ser
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Asn203His
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Asn341Tyr
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Asn416Ser
Uncertain significance
Multiple submitters
COG6-congenital disorder of glycosylation
-
COG6 p.Gln472Arg
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Glu100Val
Uncertain significance
Multiple submitters
COG6-congenital disorder of glycosylation
-
COG6 p.Glu233Lys
Uncertain significance
Multiple submitters
COG6-congenital disorder of glycosylation
-
COG6 p.His40Arg
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Ile635Thr
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Ile79Thr
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Leu122Ile
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Leu186Met
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Leu261Phe
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Leu266Ser
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Phe383Leu
Uncertain significance
Multiple submitters
COG6-congenital disorder of glycosylation
-
COG6 p.Pro369Ser
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Thr27Ser
Uncertain significance
Multiple submitters
COG6-congenital disorder of glycosylation
-
COG6 p.Thr319Ile
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Thr45Met
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Tyr554Cys
Uncertain significance
Multiple submitters
COG6-congenital disorder of glycosylation
-
COG6 p.Val244Ile
Uncertain significance
Multiple submitters
COG6-congenital disorder of glycosylation
-
COG6 p.Val247Ile
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Val429Ala
Uncertain significance
Multiple submitters
COG6-congenital disorder of glycosylation
-
COG6 p.Val487Ile
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Ala24Ser
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Ala284Val
Uncertain significance
Single submitter
hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
-
COG6 p.Ala29Val
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Ala371Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ala495Gly
Uncertain significance
Single submitter
hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- COG6 p.Ala541Asp Uncertain significance Single submitter
-
COG6 p.Ala580Thr
Uncertain significance
Single submitter
hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
-
COG6 p.Ala581Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ala59Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ala623Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Arg171Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Arg228Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Arg279Ser
Uncertain significance
Single submitter
Inborn genetic diseases
- COG6 p.Arg306Met Uncertain significance Single submitter
-
COG6 p.Arg360Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Arg520Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Arg622Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Arg70Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Arg72Gly
Uncertain significance
Single submitter
Inborn genetic diseases
- COG6 p.Asn569Asp Uncertain significance Single submitter
-
COG6 p.Asn601Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Asn636Ser
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Asp464Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Asp479His
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Asp593Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Cys32Phe
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Cys32Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Gln205His
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Gln256Lys
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Gln559Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Gln559Leu
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Gln653Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Glu3Asp
Uncertain significance
Single submitter
hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
-
COG6 p.Glu3Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Glu52Gly
Uncertain significance
Single submitter
hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
-
COG6 p.Glu637Ala
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Glu96Gln
Uncertain significance
Single submitter
hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
-
COG6 p.Gly15Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Gly288Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Gly288Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Gly291Arg
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Gly6Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.His348Arg
Uncertain significance
Single submitter
hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
-
COG6 p.His407Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ile104Val
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Ile148Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ile148Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ile342Met
Uncertain significance
Single submitter
hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
-
COG6 p.Ile361Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ile537Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ile635Phe
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ile79Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Leu200Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Leu374Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Leu536Phe
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Leu595Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Lys126Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Lys51Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Lys58Glu
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Lys98Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Met252Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Met299Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Met508Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Phe585Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Pro294Arg
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Pro356Ser
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Pro434Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Pro641Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ser103Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ser112Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ser12Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ser12Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ser164Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ser232Asn
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Ser378Cys
Uncertain significance
Single submitter
hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
-
COG6 p.Ser410Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ser439Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ser504Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ser68Asn
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Thr179Ala
Uncertain significance
Single submitter
hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
-
COG6 p.Thr265Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Thr27Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Thr334Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Thr402Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Thr654Met
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Trp314Cys
Uncertain significance
Single submitter
Inborn genetic diseases
- COG6 p.Tyr223Cys Uncertain significance Single submitter
-
COG6 p.Tyr307Cys
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Val11Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Val346Ile
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Val372Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Val652Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Val9Asp
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
Predictors split 24
The independent predictors disagree with each other — read with care.
-
COG6 p.Arg121His
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Asn87Ser
Uncertain significance
Multiple submitters
COG6-congenital disorder of glycosylation
-
COG6 p.Pro649Leu
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Tyr628Cys
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Val631Met
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
COG6 p.Ala318Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ala320Thr
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Arg121Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Arg279Cys
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
- COG6 p.Arg46Pro Uncertain significance Single submitter
-
COG6 p.Asp107Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Asp107Val
Conflicting
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Gly549Cys
Conflicting
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Gly565Asp
Uncertain significance
Single submitter
Inborn genetic diseases
- COG6 p.Ile133Thr Uncertain significance Single submitter
-
COG6 p.Ile192Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Leu330Ser
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
-
COG6 p.Phe602Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Pro290Ser
Uncertain significance
Single submitter
hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
-
COG6 p.Pro641Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Ser141Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
- COG6 p.Thr236Pro Uncertain significance Single submitter
-
COG6 p.Thr45Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
COG6 p.Tyr262His
Uncertain significance
Single submitter
COG6-congenital disorder of glycosylation
All COG6 variants
Pathogenic 16
- p.Arg171Ter Multiple submitters COG6-congenital disorder of glycosylation
- p.Leu217fs Multiple submitters COG6-congenital disorder of glycosylation
- c.1009+1G>T Single submitter COG6-congenital disorder of glycosylation
- c.1075-1G>T Single submitter
- c.153+392A>G Single submitter COG6-congenital disorder of glycosylation
- p.Ala85fs Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Gln130Ter Single submitter COG6-congenital disorder of glycosylation
- p.Gln558Ter Single submitter COG6-congenital disorder of glycosylation
- p.Gly549Val Single submitter COG6-congenital disorder of glycosylation
- p.Leu261Ter Single submitter COG6-related disorder
- p.Lys38Ter Single submitter
- p.Ser83fs Single submitter Fetal anomalies with a likely genetic cause
- p.Trp229Ter Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Cys242fs No assertion criteria COG6-congenital disorder of glycosylation
- p.Phe414fs No assertion criteria COG6-congenital disorder of glycosylation
- p.Tyr628Ter No assertion criteria COG6-congenital disorder of glycosylation
Pathogenic/Likely pathogenic 5
- c.1167-24A>G Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Arg360Ter Multiple submitters COG6-congenital disorder of glycosylation
- p.Leu329fs Multiple submitters COG6-congenital disorder of glycosylation
- p.Leu512Ter Multiple submitters COG6-congenital disorder of glycosylation
- p.Lys184fs Multiple submitters COG6-congenital disorder of glycosylation
Likely pathogenic 19
- c.1166+1G>A Multiple submitters Inborn genetic diseases
- c.154-2A>G Single submitter COG6-congenital disorder of glycosylation
- c.1585-2A>G Single submitter COG6-congenital disorder of glycosylation
- c.1746+1del Single submitter COG6-related disorder
- c.1826+2T>C Single submitter COG6-congenital disorder of glycosylation
- c.518_540+3del Single submitter
- c.623+1G>A Single submitter COG6-related disorder
- c.624-2A>G Single submitter
- c.695-8T>G Single submitter autosomal dominant intellectual disability-craniofacial anomalies-cardiac defects syndrome
- c.789-1G>T Single submitter
- p.Arg228Ter Single submitter COG6-related disorder
- p.Cys354fs Single submitter COG6-related disorder
- p.Cys354Ter Single submitter
- p.Gln231Ter Single submitter
- p.Glu180= Single submitter COG6-congenital disorder of glycosylation
- p.Ser61fs Single submitter
- p.Ser61Ter Single submitter COG6-congenital disorder of glycosylation
- p.Tyr262Cys Single submitter COG6-congenital disorder of glycosylation ⚠
- p.His302fs No assertion criteria COG6-related disorder
Conflicting classifications of pathogenicity 16
- c.1075-12A>C Single submitter COG6-congenital disorder of glycosylation
- c.1693-12T>C Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.1693-7T>A Single submitter COG6-congenital disorder of glycosylation
- c.1827-4A>G Single submitter COG6-congenital disorder of glycosylation
- c.298-1G>A Single submitter COG6-congenital disorder of glycosylation
- c.917+4T>C Single submitter COG6-congenital disorder of glycosylation
- c.*40A>G Single submitter COG6-congenital disorder of glycosylation
- p.Arg587Cys Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Asp107Val Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Asp243= Single submitter COG6-congenital disorder of glycosylation
- p.Gly549Cys Single submitter COG6-congenital disorder of glycosylation ⚠
- p.His421= Single submitter COG6-congenital disorder of glycosylation
- p.Lys82Arg Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome ⚠
- p.Met1Val Single submitter COG6-congenital disorder of glycosylation
- p.Pro649= Single submitter COG6-congenital disorder of glycosylation
- p.Ser120Gly Single submitter COG6-congenital disorder of glycosylation ⚠
Benign 76
- c.1009+9A>G Multiple submitters COG6-congenital disorder of glycosylation
- c.1074+105T>C Multiple submitters
- c.1074+18T>C Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.1075-86T>C Multiple submitters
- c.1166+68A>G Multiple submitters
- c.153+106A>C Multiple submitters
- c.153+200G>A Multiple submitters
- c.153+213C>T Multiple submitters
- c.153+278T>C Multiple submitters
- c.153+27C>T Multiple submitters
- c.153+50C>T Multiple submitters
- c.154-97T>C Multiple submitters
- c.1692+107C>T Multiple submitters
- c.1692+37A>G Multiple submitters
- c.1693-22T>C Multiple submitters
- c.1693-23T>C Multiple submitters
- c.1693-4del Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.1693-7_1693-6del Multiple submitters COG6-congenital disorder of glycosylation
- c.1746+107C>T Multiple submitters
- c.1826+78T>A Multiple submitters
- c.1827-243A>C Multiple submitters
- c.297+47C>T Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.370-94G>A Multiple submitters
- c.540+314A>G Multiple submitters
- c.623+144A>G Multiple submitters
- c.624-3dup Multiple submitters COG6-congenital disorder of glycosylation
- c.695-42A>C Multiple submitters
- c.695-56C>T Multiple submitters
- c.788+186A>G Multiple submitters
- c.788+187T>C Multiple submitters
- c.788+220C>G Multiple submitters
- c.788+82G>A Multiple submitters
- c.*1052A>G Multiple submitters COG6-congenital disorder of glycosylation
- c.*80C>T Multiple submitters COG6-congenital disorder of glycosylation
- p.Ala10Thr Multiple submitters COG6-congenital disorder of glycosylation
- p.Cys32Ser Multiple submitters COG6-congenital disorder of glycosylation
- p.Leu655Ile Multiple submitters COG6-congenital disorder of glycosylation
- p.Met447Thr Multiple submitters COG6-congenital disorder of glycosylation
- c.1074+276del Single submitter
- c.1166+231CA[15] Single submitter
- c.1166+231CA[16] Single submitter
- c.1166+231CA[18] Single submitter
- c.1166+236A>G Single submitter
- c.1166+240A>G Single submitter
- c.1167-287del Single submitter
- c.1285-76del Single submitter
- c.1417-111C>T Single submitter
- c.154-207T>G Single submitter
- c.154-310del Single submitter
- c.1584+168AC[13] Single submitter
- c.1584+168AC[15] Single submitter
- c.1584+168AC[17] Single submitter
- c.1584+168AC[18] Single submitter
- c.1584+168AC[19] Single submitter
- c.1692+220T>C Single submitter
- c.1693-24T>C Single submitter
- c.1693-7del Single submitter
- c.1693-8_1693-6del Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.297+322C>A Single submitter
- c.369+167A>G Single submitter
- c.369+23dup Single submitter COG6-congenital disorder of glycosylation
- c.370-189T>G Single submitter
- c.370-230A>T Single submitter
- c.428+232T>C Single submitter
- c.429-183A>G Single submitter
- c.540+135A>T Single submitter
- c.694+102_694+105del Single submitter
- c.694+208C>T Single submitter
- c.789-118A>G Single submitter
- c.789-156T>C Single submitter
- c.789-262C>G Single submitter
- c.*1093G>T Single submitter COG6-congenital disorder of glycosylation
- c.*147del Single submitter
- c.*147dup Single submitter
- p.Ala313= Single submitter COG6-congenital disorder of glycosylation
- c.1693-8_1693-7del No assertion criteria COG6-related disorder
Benign/Likely benign 8
- c.153+19G>A Multiple submitters COG6-congenital disorder of glycosylation
- c.1693-6A>T Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.-17dup Multiple submitters
- p.Asn394Asp Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Gly23= Multiple submitters COG6-congenital disorder of glycosylation
- p.His300Tyr Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Leu285= Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Leu436= Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
Likely benign 105
- c.1009+15T>C Multiple submitters COG6-congenital disorder of glycosylation
- c.1284+27A>G Multiple submitters
- c.153+11C>A Multiple submitters COG6-congenital disorder of glycosylation
- c.1692+13A>G Multiple submitters COG6-congenital disorder of glycosylation
- c.1692+19C>T Multiple submitters COG6-congenital disorder of glycosylation
- c.298-97T>G Multiple submitters
- c.369+13G>A Multiple submitters
- c.370-18A>G Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.-53T>G Multiple submitters COG6-congenital disorder of glycosylation
- p.Asn22Ser Multiple submitters Inborn genetic diseases
- p.Asn87= Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Glu327= Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Ile42= Multiple submitters COG6-congenital disorder of glycosylation
- p.Leu101= Multiple submitters COG6-congenital disorder of glycosylation
- p.Leu357= Multiple submitters COG6-congenital disorder of glycosylation
- p.Lys411= Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Pro290= Multiple submitters COG6-congenital disorder of glycosylation
- p.Thr511= Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.1009+50A>G Single submitter
- c.1010-14G>A Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.1075-48A>T Single submitter
- c.1166+231CA[14] Single submitter
- c.1284+19A>T Single submitter
- c.1285-10C>T Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.1416+4T>A Single submitter
- c.1417-8A>C Single submitter
- c.153+15C>T Single submitter COG6-congenital disorder of glycosylation
- c.154-12C>T Single submitter COG6-congenital disorder of glycosylation
- c.154-6G>C Single submitter
- c.1585-18C>G Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.1585-19_1585-18insAAAAT Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.1692+12G>C Single submitter COG6-congenital disorder of glycosylation
- c.1692+14T>C Single submitter COG6-congenital disorder of glycosylation
- c.1692+179G>A Single submitter
- c.1692+9A>G Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.1693-13T>C Single submitter
- c.1746+14A>G Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.1746+8T>A Single submitter COG6-congenital disorder of glycosylation
- c.1747-19A>G Single submitter COG6-congenital disorder of glycosylation
- c.1747-4T>A Single submitter
- c.1826+14G>A Single submitter
- c.1826+8T>C Single submitter
- c.369+8A>G Single submitter
- c.370-18A>T Single submitter COG6-congenital disorder of glycosylation
- c.428+18C>T Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.429-13T>C Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.541-14del Single submitter
- c.623+16C>G Single submitter
- c.623+7A>G Single submitter
- c.624-4_624-3dup Single submitter
- c.694+7G>T Single submitter COG6-congenital disorder of glycosylation
- c.695-20T>C Single submitter COG6-congenital disorder of glycosylation
- c.788+10T>A Single submitter COG6-congenital disorder of glycosylation
- c.917+15C>T Single submitter
- c.917+19A>G Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.-21_-20insC Single submitter
- c.-41G>C Single submitter
- c.-43C>T Single submitter
- c.*157G>C Single submitter
- c.*315del Single submitter COG6-congenital disorder of glycosylation
- c.*3A>T Single submitter
- c.*889T>A Single submitter COG6-congenital disorder of glycosylation
- p.Ala454= Single submitter COG6-congenital disorder of glycosylation
- p.Arg355= Single submitter
- p.Arg520= Single submitter COG6-congenital disorder of glycosylation
- p.Asn113Ser Single submitter Inborn genetic diseases
- p.Asn613= Single submitter
- p.Asp195= Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Asp534= Single submitter COG6-congenital disorder of glycosylation
- p.His456= Single submitter COG6-congenital disorder of glycosylation
- p.Ile529= Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Ile612= Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Ile86= Single submitter
- p.Leu35= Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Leu380= Single submitter COG6-congenital disorder of glycosylation
- p.Leu431= Single submitter
- p.Leu453= Single submitter COG6-congenital disorder of glycosylation
- p.Leu481= Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Leu505= Single submitter
- p.Leu514= Single submitter COG6-congenital disorder of glycosylation
- p.Leu596= Single submitter COG6-congenital disorder of glycosylation
- p.Lys331= Single submitter COG6-congenital disorder of glycosylation
- p.Lys382Arg Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Lys41= Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Lys95= Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Lys98= Single submitter
- p.Phe414= Single submitter COG6-congenital disorder of glycosylation
- p.Ser105= Single submitter
- p.Ser112= Single submitter COG6-congenital disorder of glycosylation
- p.Ser241= Single submitter COG6-congenital disorder of glycosylation
- p.Ser28= Single submitter
- p.Thr556= Single submitter
- p.Thr654= Single submitter
- p.Val308= Single submitter COG6-congenital disorder of glycosylation
- p.Val576= Single submitter
- p.Val8= Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.1167-10T>C No assertion criteria COG6-related disorder
- c.1167-23C>T No assertion criteria COG6-related disorder
- c.1692+3A>G No assertion criteria COG6-related disorder
- c.297+4T>C No assertion criteria COG6-related disorder
- c.298-8C>A No assertion criteria COG6-related disorder
- c.*3A>G No assertion criteria COG6-related disorder
- p.Ala284= No assertion criteria COG6-related disorder
- p.Leu122= No assertion criteria COG6-related disorder
- p.Tyr588= No assertion criteria COG6-related disorder
Uncertain significance 200
- c.*1532T>G Multiple submitters COG6-congenital disorder of glycosylation
- c.*52G>A Multiple submitters COG6-congenital disorder of glycosylation
- p.Ala13Thr Multiple submitters Inborn genetic diseases ⚠
- p.Arg121His Multiple submitters Inborn genetic diseases ⚠
- p.Arg201Leu Multiple submitters Inborn genetic diseases
- p.Arg466His Multiple submitters Inborn genetic diseases ⚠
- p.Arg587His Multiple submitters Inborn genetic diseases ⚠
- p.Arg81Ser Multiple submitters ⚠
- p.Asn18Ser Multiple submitters Inborn genetic diseases ⚠
- p.Asn203His Multiple submitters Inborn genetic diseases ⚠
- p.Asn341Tyr Multiple submitters Inborn genetic diseases ⚠
- p.Asn416Ser Multiple submitters COG6-congenital disorder of glycosylation ⚠
- p.Asn87Ser Multiple submitters COG6-congenital disorder of glycosylation ⚠
- p.Cys476Arg Multiple submitters Inborn genetic diseases
- p.Gln472Arg Multiple submitters Inborn genetic diseases ⚠
- p.Glu100Val Multiple submitters COG6-congenital disorder of glycosylation ⚠
- p.Glu233Lys Multiple submitters COG6-congenital disorder of glycosylation ⚠
- p.His40Arg Multiple submitters Inborn genetic diseases ⚠
- p.Ile635Thr Multiple submitters Inborn genetic diseases ⚠
- p.Ile79Thr Multiple submitters Inborn genetic diseases ⚠
- p.Leu122Ile Multiple submitters Inborn genetic diseases ⚠
- p.Leu186Met Multiple submitters Inborn genetic diseases ⚠
- p.Leu261Phe Multiple submitters Inborn genetic diseases ⚠
- p.Leu266Ser Multiple submitters Inborn genetic diseases ⚠
- p.Met632fs Multiple submitters hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Phe383Leu Multiple submitters COG6-congenital disorder of glycosylation ⚠
- p.Pro369Ser Multiple submitters Inborn genetic diseases ⚠
- p.Pro649Leu Multiple submitters Inborn genetic diseases ⚠
- p.Thr27Ser Multiple submitters COG6-congenital disorder of glycosylation ⚠
- p.Thr319Ile Multiple submitters Inborn genetic diseases ⚠
- p.Thr45Met Multiple submitters Inborn genetic diseases ⚠
- p.Tyr554Cys Multiple submitters COG6-congenital disorder of glycosylation ⚠
- p.Tyr628Cys Multiple submitters Inborn genetic diseases ⚠
- p.Val244Ile Multiple submitters COG6-congenital disorder of glycosylation ⚠
- p.Val247Ile Multiple submitters Inborn genetic diseases ⚠
- p.Val429Ala Multiple submitters COG6-congenital disorder of glycosylation ⚠
- p.Val487Ile Multiple submitters Inborn genetic diseases ⚠
- p.Val631Met Multiple submitters Inborn genetic diseases ⚠
- c.1009+6T>C Single submitter COG6-congenital disorder of glycosylation
- c.1285-3812A>G Single submitter
- c.1584+3A>T Single submitter
- c.1693-11_1693-6del Single submitter Inborn genetic diseases
- c.1746+2T>G Single submitter COG6-congenital disorder of glycosylation
- c.1746+5G>A Single submitter
- c.1826+3A>C Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- c.369+4T>C Single submitter COG6-congenital disorder of glycosylation
- c.623+1G>T Single submitter COG6-congenital disorder of glycosylation
- c.788+5G>A Single submitter COG6-congenital disorder of glycosylation
- c.-10G>C Single submitter COG6-congenital disorder of glycosylation
- c.-44C>G Single submitter COG6-congenital disorder of glycosylation
- c.-50G>A Single submitter COG6-congenital disorder of glycosylation
- c.*1001C>G Single submitter COG6-congenital disorder of glycosylation
- c.*1181T>C Single submitter COG6-congenital disorder of glycosylation
- c.*1196A>T Single submitter COG6-congenital disorder of glycosylation
- c.*1210A>G Single submitter COG6-congenital disorder of glycosylation
- c.*1241A>G Single submitter COG6-congenital disorder of glycosylation
- c.*1248T>A Single submitter COG6-congenital disorder of glycosylation
- c.*129C>T Single submitter COG6-congenital disorder of glycosylation
- c.*149G>T Single submitter COG6-congenital disorder of glycosylation
- c.*1508G>T Single submitter COG6-congenital disorder of glycosylation
- c.*352T>G Single submitter COG6-congenital disorder of glycosylation
- c.*443A>G Single submitter COG6-congenital disorder of glycosylation
- c.*555G>A Single submitter COG6-congenital disorder of glycosylation
- c.*589C>G Single submitter COG6-congenital disorder of glycosylation
- c.*61T>C Single submitter COG6-congenital disorder of glycosylation
- c.*720A>G Single submitter COG6-congenital disorder of glycosylation
- c.*86T>C Single submitter COG6-congenital disorder of glycosylation
- c.*889T>C Single submitter COG6-congenital disorder of glycosylation
- c.*987A>G Single submitter COG6-congenital disorder of glycosylation
- c.*9T>C Single submitter
- n.34A>T Single submitter
- p.Ala24Ser Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Ala251Thr Single submitter Inborn genetic diseases
- p.Ala284Val Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome ⚠
- p.Ala29Val Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Ala318Gly Single submitter Inborn genetic diseases ⚠
- p.Ala320Thr Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Ala371Thr Single submitter Inborn genetic diseases ⚠
- p.Ala495Gly Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome ⚠
- p.Ala541Asp Single submitter ⚠
- p.Ala580Thr Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome ⚠
- p.Ala581Val Single submitter Inborn genetic diseases ⚠
- p.Ala59Ser Single submitter Inborn genetic diseases ⚠
- p.Ala623Val Single submitter Inborn genetic diseases ⚠
- p.Arg121Cys Single submitter Inborn genetic diseases ⚠
- p.Arg171Gln Single submitter Inborn genetic diseases ⚠
- p.Arg228Gln Single submitter Inborn genetic diseases ⚠
- p.Arg279Cys Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Arg279Ser Single submitter Inborn genetic diseases ⚠
- p.Arg306Met Single submitter ⚠
- p.Arg360Gln Single submitter Inborn genetic diseases ⚠
- p.Arg466Cys Single submitter Inborn genetic diseases
- p.Arg46Pro Single submitter ⚠
- p.Arg520Gly Single submitter Inborn genetic diseases ⚠
- p.Arg622Lys Single submitter Inborn genetic diseases ⚠
- p.Arg70Gln Single submitter Inborn genetic diseases ⚠
- p.Arg72Gly Single submitter Inborn genetic diseases ⚠
- p.Asn379His Single submitter COG6-congenital disorder of glycosylation
- p.Asn569Asp Single submitter ⚠
- p.Asn601Ser Single submitter Inborn genetic diseases ⚠
- p.Asn636Ser Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Asp107Ala Single submitter Inborn genetic diseases ⚠
- p.Asp464Gly Single submitter Inborn genetic diseases ⚠
- p.Asp479His Single submitter Inborn genetic diseases ⚠
- p.Asp593Gly Single submitter Inborn genetic diseases ⚠
- p.Cys242Arg Single submitter Inborn genetic diseases
- p.Cys32Phe Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Cys32Tyr Single submitter Inborn genetic diseases ⚠
- p.Cys485Ser Single submitter Inborn genetic diseases
- p.Gln161His Single submitter
- p.Gln205His Single submitter Inborn genetic diseases ⚠
- p.Gln256Lys Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Gln559Glu Single submitter Inborn genetic diseases ⚠
- p.Gln559Leu Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Gln653Arg Single submitter Inborn genetic diseases ⚠
- p.Glu3Asp Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome ⚠
- p.Glu3Gln Single submitter Inborn genetic diseases ⚠
- p.Glu52Gly Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome ⚠
- p.Glu637Ala Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Glu96Gln Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome ⚠
- p.Gly15Arg Single submitter Inborn genetic diseases ⚠
- p.Gly288Arg Single submitter Inborn genetic diseases ⚠
- p.Gly288Glu Single submitter Inborn genetic diseases ⚠
- p.Gly291Arg Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Gly4= Single submitter COG6-congenital disorder of glycosylation
- p.Gly565Asp Single submitter Inborn genetic diseases ⚠
- p.Gly6Arg Single submitter Inborn genetic diseases ⚠
- p.His302Tyr Single submitter Inborn genetic diseases
- p.His348Arg Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome ⚠
- p.His407Tyr Single submitter Inborn genetic diseases ⚠
- p.Ile104Val Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Ile133Thr Single submitter ⚠
- p.Ile148Met Single submitter Inborn genetic diseases ⚠
- p.Ile148Thr Single submitter Inborn genetic diseases ⚠
- p.Ile192Met Single submitter Inborn genetic diseases ⚠
- p.Ile342Met Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome ⚠
- p.Ile361Thr Single submitter Inborn genetic diseases ⚠
- p.Ile537Met Single submitter Inborn genetic diseases ⚠
- p.Ile635Phe Single submitter Inborn genetic diseases ⚠
- p.Ile79Val Single submitter Inborn genetic diseases ⚠
- p.Leu200Trp Single submitter Inborn genetic diseases ⚠
- p.Leu330Ser Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Leu374Ile Single submitter Inborn genetic diseases ⚠
- p.Leu381del Single submitter COG6-congenital disorder of glycosylation
- p.Leu536Phe Single submitter Inborn genetic diseases ⚠
- p.Leu595Val Single submitter Inborn genetic diseases ⚠
- p.Leu604= Single submitter COG6-congenital disorder of glycosylation
- p.Lys126Arg Single submitter Inborn genetic diseases ⚠
- p.Lys412= Single submitter COG6-congenital disorder of glycosylation
- p.Lys51Arg Single submitter Inborn genetic diseases ⚠
- p.Lys58Glu Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Lys98Arg Single submitter Inborn genetic diseases ⚠
- p.Met252Val Single submitter Inborn genetic diseases ⚠
- p.Met299Val Single submitter Inborn genetic diseases ⚠
- p.Met508Val Single submitter Inborn genetic diseases ⚠
- p.Phe585Tyr Single submitter Inborn genetic diseases ⚠
- p.Phe602Leu Single submitter Inborn genetic diseases ⚠
- p.Pro290Ser Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome ⚠
- p.Pro294Arg Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Pro356Ser Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Pro434Leu Single submitter Inborn genetic diseases ⚠
- p.Pro641Ala Single submitter Inborn genetic diseases ⚠
- p.Pro641Thr Single submitter Inborn genetic diseases ⚠
- p.Ser103Asn Single submitter Inborn genetic diseases ⚠
- p.Ser112Asn Single submitter Inborn genetic diseases ⚠
- p.Ser12Cys Single submitter Inborn genetic diseases ⚠
- p.Ser12Thr Single submitter Inborn genetic diseases ⚠
- p.Ser141Tyr Single submitter Inborn genetic diseases ⚠
- p.Ser164Ala Single submitter Inborn genetic diseases ⚠
- p.Ser232Asn Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Ser378Cys Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome ⚠
- p.Ser410Arg Single submitter Inborn genetic diseases ⚠
- p.Ser439Asn Single submitter Inborn genetic diseases ⚠
- p.Ser504Thr Single submitter Inborn genetic diseases ⚠
- p.Ser648fs Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome
- p.Ser648Ter Single submitter
- p.Ser68Asn Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Thr179Ala Single submitter hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome ⚠
- p.Thr221= Single submitter COG6-congenital disorder of glycosylation
- p.Thr236Pro Single submitter ⚠
- p.Thr265Ser Single submitter Inborn genetic diseases ⚠
- p.Thr276= Single submitter COG6-congenital disorder of glycosylation
- p.Thr27Ile Single submitter Inborn genetic diseases ⚠
- p.Thr334Ile Single submitter Inborn genetic diseases ⚠
- p.Thr335del Single submitter
- p.Thr402Ala Single submitter Inborn genetic diseases ⚠
- p.Thr45Lys Single submitter Inborn genetic diseases ⚠
- p.Thr617= Single submitter COG6-congenital disorder of glycosylation
- p.Thr654Met Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Trp314Cys Single submitter Inborn genetic diseases ⚠
- p.Tyr223Cys Single submitter ⚠
- p.Tyr262His Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Tyr307Cys Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Tyr638_Lys639delinsTer Single submitter
- p.Val11Glu Single submitter Inborn genetic diseases ⚠
- p.Val346Ile Single submitter COG6-congenital disorder of glycosylation ⚠
- p.Val372Ile Single submitter Inborn genetic diseases ⚠
- p.Val652Ala Single submitter Inborn genetic diseases ⚠
- p.Val97Met Single submitter
- p.Val9Asp Single submitter COG6-congenital disorder of glycosylation ⚠