CPSF1 — 263 ClinVar variants

All ClinVar germline CPSF1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 223 flagged for review →

5 Pathogenic · 3 Likely pathogenic · 3 Conflicting · 1 Benign · 18 Likely benign · 233 Uncertain significance

Full CPSF1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 223

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors lean, ClinVar uncertain 130

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 93

The independent predictors disagree with each other — read with care.

All CPSF1 variants

Pathogenic 5

Likely pathogenic 3

Conflicting classifications of pathogenicity 3

Benign 1

  • p.Ser674= No assertion criteria CPSF1-related disorder

Likely benign 18

Uncertain significance 233