DDRGK1 — 160 ClinVar variants
All ClinVar germline DDRGK1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 84 flagged for review →
2 Pathogenic · 1 Likely pathogenic · 13 Benign · 1 Benign/Likely benign · 61 Likely benign · 82 Uncertain significance
Full DDRGK1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 84
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors lean, ClinVar uncertain 35
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
DDRGK1 p.Ala95Gly
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Arg265Trp
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Arg27Gln
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Arg46Gln
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Gly202Asp
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Ile271Val
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Val279Ala
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Ala109Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Ala195Ser
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Ala292Thr Uncertain significance Single submitter
-
DDRGK1 p.Ala48Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Arg142Cys
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Arg142Pro Uncertain significance Single submitter
-
DDRGK1 p.Arg265Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Arg288Trp
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Asn91Lys Uncertain significance Single submitter
-
DDRGK1 p.Asp263Gly
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Asp264Asn Uncertain significance Single submitter
-
DDRGK1 p.Glu149Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Glu275Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Glu293Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Glu56Gly
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Ile283Phe Uncertain significance Single submitter
-
DDRGK1 p.Lys158Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Lys227Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Phe196Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Pro35Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Pro4Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Pro52Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Pro58Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Ser30Leu
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Thr22Ile Uncertain significance Single submitter
-
DDRGK1 p.Tyr189Cys
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Tyr7Phe Uncertain significance Single submitter
-
DDRGK1 p.Val289Leu
Uncertain significance
Single submitter
Inborn genetic diseases
Predictors split 49
The independent predictors disagree with each other — read with care.
-
DDRGK1 p.Ala29Val
Uncertain significance
Multiple submitters
Inborn genetic diseases
- DDRGK1 p.Arg145Trp Benign Multiple submitters
- DDRGK1 p.Arg147Gln Uncertain significance Multiple submitters
- DDRGK1 p.Arg164Leu Benign Multiple submitters
-
DDRGK1 p.Arg241His
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Arg65Gln
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Arg79Gly
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Glu106Lys
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Glu179Gly
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.His186Arg
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Ile302Val
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Ser236Phe
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Val279Met
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
DDRGK1 p.Ala130Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Ala177Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Ala195Val
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Ala278Thr Uncertain significance Single submitter
-
DDRGK1 p.Ala295Gly
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Ala295Thr Uncertain significance Single submitter
- DDRGK1 p.Arg123Gln Uncertain significance Single submitter
- DDRGK1 p.Arg131Gln Uncertain significance Single submitter
- DDRGK1 p.Arg145Gln Uncertain significance Single submitter
- DDRGK1 p.Arg152Cys Uncertain significance Single submitter
-
DDRGK1 p.Arg152His
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Arg162Gln Uncertain significance Single submitter
-
DDRGK1 p.Arg162Trp
Uncertain significance
Single submitter
hyperphosphatasia with intellectual disability syndrome 2
- DDRGK1 p.Arg164His Uncertain significance Single submitter
-
DDRGK1 p.Arg178Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Arg184Gln
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Arg184Trp Uncertain significance Single submitter
- DDRGK1 p.Arg248Cys Uncertain significance Single submitter
- DDRGK1 p.Arg248His Uncertain significance Single submitter
- DDRGK1 p.Arg25Trp Uncertain significance Single submitter
-
DDRGK1 p.Arg286Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Arg46Trp
Likely benign
Single submitter
Inborn genetic diseases
- DDRGK1 p.Arg65Trp Uncertain significance Single submitter
-
DDRGK1 p.Arg67Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Gln169Pro
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Glu136Lys Uncertain significance Single submitter
-
DDRGK1 p.Glu161Gly
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Glu173Gly Uncertain significance Single submitter
- DDRGK1 p.Glu92Lys Uncertain significance Single submitter
-
DDRGK1 p.Gly204Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Ile291Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Leu122Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Leu165Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Lys146Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
DDRGK1 p.Lys170Glu
Uncertain significance
Single submitter
Inborn genetic diseases
- DDRGK1 p.Val203Ile Likely benign Single submitter
All DDRGK1 variants
Pathogenic 2
- p.Arg131Ter Multiple submitters spondyloepimetaphyseal dysplasia, Shohat type
- c.408+1G>A No assertion criteria spondyloepimetaphyseal dysplasia, Shohat type
Likely pathogenic 1
- c.510+2T>G Single submitter
Benign 13
- c.295+6A>G Multiple submitters
- c.408+15T>G Multiple submitters
- c.510+14C>T Multiple submitters
- c.511-10A>G Multiple submitters spondyloepimetaphyseal dysplasia, Shohat type
- c.91+9T>A Multiple submitters
- p.Ala303Thr Multiple submitters
- p.Arg145Trp Multiple submitters ⚠
- p.Arg164Leu Multiple submitters ⚠
- p.Arg178= Multiple submitters
- c.408+16G>C Single submitter
- c.409-19del Single submitter
- p.Asn91= Single submitter
- p.Glu173= Single submitter
Benign/Likely benign 1
- p.Leu148= Multiple submitters
Likely benign 61
- p.Glu168= Multiple submitters
- c.408+7C>T Single submitter
- c.408+8G>A Single submitter
- c.409-6C>G Single submitter
- c.409-9TC[2] Single submitter
- c.510+11C>T Single submitter
- c.510+12C>G Single submitter
- c.511-18T>C Single submitter
- c.511-8G>A Single submitter
- c.634-19G>C Single submitter
- c.672+19G>A Single submitter
- c.672+9C>T Single submitter
- c.673-11T>C Single submitter
- c.673-14C>T Single submitter
- c.673-16C>G Single submitter
- c.673-6T>C Single submitter
- c.673-8T>C Single submitter
- c.729+11G>A Single submitter
- c.729+15G>A Single submitter
- c.729+15G>T Single submitter
- c.730-10C>T Single submitter
- c.730-13G>C Single submitter
- c.730-16G>A Single submitter
- c.778+11G>A Single submitter
- c.779-17C>T Single submitter
- c.91+19C>G Single submitter
- p.Ala10= Single submitter
- p.Ala109= Single submitter
- p.Ala109Val Single submitter Inborn genetic diseases
- p.Ala11= Single submitter
- p.Ala140= Single submitter
- p.Ala254= Single submitter
- p.Ala278= Single submitter
- p.Ala292= Single submitter
- p.Ala3= Single submitter
- p.Ala31= Single submitter
- p.Ala312= Single submitter
- p.Arg152= Single submitter
- p.Arg265= Single submitter
- p.Arg306Gln Single submitter Inborn genetic diseases
- p.Arg46= Single submitter
- p.Arg46Trp Single submitter Inborn genetic diseases ⚠
- p.Arg82= Single submitter
- p.Asp251= Single submitter
- p.Asp263= Single submitter
- p.Glu160= Single submitter
- p.Glu174= Single submitter
- p.Glu188= Single submitter
- p.Glu57= Single submitter
- p.Gly26= Single submitter
- p.Ile18= Single submitter
- p.Ile291= Single submitter
- p.Ile302= Single submitter
- p.Leu234= Single submitter
- p.Leu240= Single submitter
- p.Leu74= Single submitter
- p.Lys158= Single submitter
- p.Pro58= Single submitter
- p.Ser114= Single submitter
- p.Val203Ile Single submitter ⚠
- p.Val5= Single submitter
Uncertain significance 82
- p.Ala29Val Multiple submitters Inborn genetic diseases ⚠
- p.Ala95Gly Multiple submitters Inborn genetic diseases ⚠
- p.Arg147Gln Multiple submitters ⚠
- p.Arg241His Multiple submitters Inborn genetic diseases ⚠
- p.Arg265Trp Multiple submitters Inborn genetic diseases ⚠
- p.Arg27Gln Multiple submitters Inborn genetic diseases ⚠
- p.Arg46Gln Multiple submitters Inborn genetic diseases ⚠
- p.Arg65Gln Multiple submitters Inborn genetic diseases ⚠
- p.Arg79Gly Multiple submitters Inborn genetic diseases ⚠
- p.Glu106Lys Multiple submitters Inborn genetic diseases ⚠
- p.Glu179Gly Multiple submitters Inborn genetic diseases ⚠
- p.Gly202Asp Multiple submitters Inborn genetic diseases ⚠
- p.His186Arg Multiple submitters Inborn genetic diseases ⚠
- p.Ile271Val Multiple submitters Inborn genetic diseases ⚠
- p.Ile302Val Multiple submitters Inborn genetic diseases ⚠
- p.Ser236Phe Multiple submitters Inborn genetic diseases ⚠
- p.Val279Ala Multiple submitters Inborn genetic diseases ⚠
- p.Val279Met Multiple submitters Inborn genetic diseases ⚠
- c.730-3T>C Single submitter
- c.779-3C>A Single submitter
- p.Ala109Glu Single submitter Inborn genetic diseases ⚠
- p.Ala130Gly Single submitter Inborn genetic diseases ⚠
- p.Ala177Thr Single submitter Inborn genetic diseases ⚠
- p.Ala195Ser Single submitter Inborn genetic diseases ⚠
- p.Ala195Val Single submitter Inborn genetic diseases ⚠
- p.Ala278Thr Single submitter ⚠
- p.Ala292Thr Single submitter ⚠
- p.Ala295Gly Single submitter Inborn genetic diseases ⚠
- p.Ala295Thr Single submitter ⚠
- p.Ala48Val Single submitter Inborn genetic diseases ⚠
- p.Arg123Gln Single submitter ⚠
- p.Arg131Gln Single submitter ⚠
- p.Arg142Cys Single submitter Inborn genetic diseases ⚠
- p.Arg142Pro Single submitter ⚠
- p.Arg145Gln Single submitter ⚠
- p.Arg152Cys Single submitter ⚠
- p.Arg152His Single submitter Inborn genetic diseases ⚠
- p.Arg162Gln Single submitter ⚠
- p.Arg162Trp Single submitter hyperphosphatasia with intellectual disability syndrome 2 ⚠
- p.Arg164His Single submitter ⚠
- p.Arg178Cys Single submitter Inborn genetic diseases ⚠
- p.Arg184Gln Single submitter Inborn genetic diseases ⚠
- p.Arg184Trp Single submitter ⚠
- p.Arg248Cys Single submitter ⚠
- p.Arg248His Single submitter ⚠
- p.Arg25Trp Single submitter ⚠
- p.Arg265Gln Single submitter Inborn genetic diseases ⚠
- p.Arg286Trp Single submitter Inborn genetic diseases ⚠
- p.Arg288Trp Single submitter Inborn genetic diseases ⚠
- p.Arg65Trp Single submitter ⚠
- p.Arg67Gln Single submitter Inborn genetic diseases ⚠
- p.Asn91Lys Single submitter ⚠
- p.Asp263Gly Single submitter Inborn genetic diseases ⚠
- p.Asp264Asn Single submitter ⚠
- p.Gln169Pro Single submitter Inborn genetic diseases ⚠
- p.Glu136Lys Single submitter ⚠
- p.Glu149Lys Single submitter Inborn genetic diseases ⚠
- p.Glu161Gly Single submitter Inborn genetic diseases ⚠
- p.Glu173Gly Single submitter ⚠
- p.Glu275Lys Single submitter Inborn genetic diseases ⚠
- p.Glu293Lys Single submitter Inborn genetic diseases ⚠
- p.Glu56Gly Single submitter Inborn genetic diseases ⚠
- p.Glu92Lys Single submitter ⚠
- p.Gly204Arg Single submitter Inborn genetic diseases ⚠
- p.Ile283Phe Single submitter ⚠
- p.Ile291Val Single submitter Inborn genetic diseases ⚠
- p.Leu122Pro Single submitter Inborn genetic diseases ⚠
- p.Leu165Pro Single submitter Inborn genetic diseases ⚠
- p.Lys146Thr Single submitter Inborn genetic diseases ⚠
- p.Lys158Gln Single submitter Inborn genetic diseases ⚠
- p.Lys170Glu Single submitter Inborn genetic diseases ⚠
- p.Lys227Asn Single submitter Inborn genetic diseases ⚠
- p.Phe196Ile Single submitter Inborn genetic diseases ⚠
- p.Pro35Leu Single submitter Inborn genetic diseases ⚠
- p.Pro4Ser Single submitter Inborn genetic diseases ⚠
- p.Pro52Leu Single submitter Inborn genetic diseases ⚠
- p.Pro58Ala Single submitter Inborn genetic diseases ⚠
- p.Ser30Leu Single submitter Inborn genetic diseases ⚠
- p.Thr22Ile Single submitter ⚠
- p.Tyr189Cys Single submitter Inborn genetic diseases ⚠
- p.Tyr7Phe Single submitter ⚠
- p.Val289Leu Single submitter Inborn genetic diseases ⚠