DNAJC6 — 380 ClinVar variants

All ClinVar germline DNAJC6 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 157 flagged for review →

9 Pathogenic · 5 Likely pathogenic · 4 Conflicting · 47 Benign · 9 Benign/Likely benign · 128 Likely benign · 178 Uncertain significance

Full DNAJC6 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 157

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 1

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 92

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 64

The independent predictors disagree with each other — read with care.

All DNAJC6 variants

Pathogenic 9

  • p.Arg330Ter Multiple submitters juvenile onset Parkinson disease 19A
  • p.Ala227fs Single submitter juvenile onset Parkinson disease 19A
  • p.Arg152Ter Single submitter juvenile onset Parkinson disease 19A
  • p.Gln820fs Single submitter juvenile onset Parkinson disease 19A
  • p.Glu494fs Single submitter DNAJC6-related disorder
  • c.801-2A>G No assertion criteria juvenile-onset diabetes mellitus-central and peripheral neurodegeneration syndrome
  • p.Arg927Gly No assertion criteria Parkinson disease 19B, early-onset
  • p.Gln804Ter No assertion criteria juvenile onset Parkinson disease 19A
  • p.Gln846Ter No assertion criteria juvenile onset Parkinson disease 19A

Likely pathogenic 5

  • c.194-1G>A Single submitter juvenile onset Parkinson disease 19A
  • c.666+1G>A Single submitter juvenile onset Parkinson disease 19A
  • p.Glu17Ter Single submitter juvenile onset Parkinson disease 19A
  • p.Met235fs Single submitter
  • p.Pro857fs Single submitter juvenile onset Parkinson disease 19A

Conflicting classifications of pathogenicity 4

  • c.344+4C>T Single submitter juvenile onset Parkinson disease 19A
  • c.344+6C>T Single submitter juvenile onset Parkinson disease 19A
  • p.Ala572Val Single submitter Inborn genetic diseases ⚠
  • p.Cys498Ser Single submitter juvenile onset Parkinson disease 19A ⚠

Benign 47

Benign/Likely benign 9

  • c.194-18T>G Multiple submitters juvenile onset Parkinson disease 19A
  • c.194-20_194-19insG Multiple submitters juvenile onset Parkinson disease 19A
  • p.Ala226= Multiple submitters juvenile onset Parkinson disease 19A
  • p.Gly777= Multiple submitters juvenile onset Parkinson disease 19A
  • p.Ile249Val Multiple submitters juvenile onset Parkinson disease 19A
  • p.Leu486Phe Multiple submitters juvenile onset Parkinson disease 19A
  • p.Pro570= Multiple submitters juvenile onset Parkinson disease 19A
  • p.Pro817= Multiple submitters juvenile onset Parkinson disease 19A
  • p.Thr440= Multiple submitters juvenile onset Parkinson disease 19A

Likely benign 128

  • c.1904-68G>A Multiple submitters
  • c.194-5G>T Multiple submitters juvenile onset Parkinson disease 19A
  • c.2227+171G>A Multiple submitters
  • c.2811+135T>C Multiple submitters
  • c.666+216C>T Multiple submitters
  • c.*174C>T Multiple submitters
  • p.Arg48= Multiple submitters juvenile onset Parkinson disease 19A
  • p.Asn526Ser Multiple submitters juvenile onset Parkinson disease 19A
  • p.Gly88= Multiple submitters juvenile onset Parkinson disease 19A
  • p.Leu394= Multiple submitters juvenile onset Parkinson disease 19A
  • p.Leu842= Multiple submitters juvenile onset Parkinson disease 19A
  • p.Ser720Leu Multiple submitters juvenile onset Parkinson disease 19A
  • p.Thr752Ser Multiple submitters juvenile onset Parkinson disease 19A
  • p.Thr899= Multiple submitters juvenile onset Parkinson disease 19A
  • p.Tyr946= Multiple submitters juvenile onset Parkinson disease 19A
  • c.1113+324A>G Single submitter
  • c.1114-72C>G Single submitter
  • c.1193+16G>A Single submitter juvenile onset Parkinson disease 19A
  • c.1194-148A>C Single submitter
  • c.1194-148A>G Single submitter
  • c.1194-208T>G Single submitter
  • c.1194-9C>G Single submitter juvenile onset Parkinson disease 19A
  • c.1388-20A>G Single submitter juvenile onset Parkinson disease 19A
  • c.1468+171G>A Single submitter
  • c.1904-12A>G Single submitter juvenile onset Parkinson disease 19A
  • c.1904-20del Single submitter juvenile onset Parkinson disease 19A
  • c.1904-326T>C Single submitter
  • c.193+221C>T Single submitter
  • c.193+9G>T Single submitter juvenile onset Parkinson disease 19A
  • c.194-13T>G Single submitter juvenile onset Parkinson disease 19A
  • c.194-15T>G Single submitter juvenile onset Parkinson disease 19A
  • c.194-16T>G Single submitter juvenile onset Parkinson disease 19A
  • c.194-22dup Single submitter
  • c.194-6dup Single submitter
  • c.2038+16A>G Single submitter juvenile onset Parkinson disease 19A
  • c.2039-4G>T Single submitter juvenile onset Parkinson disease 19A
  • c.2107+11G>T Single submitter juvenile onset Parkinson disease 19A
  • c.2107+288C>T Single submitter
  • c.2107+8_2107+10del Single submitter juvenile onset Parkinson disease 19A
  • c.2108-14T>C Single submitter juvenile onset Parkinson disease 19A
  • c.2108-202A>G Single submitter
  • c.2227+271C>T Single submitter
  • c.2227+306G>A Single submitter
  • c.2228-17T>A Single submitter juvenile onset Parkinson disease 19A
  • c.2491+276G>A Single submitter
  • c.2492-12A>T Single submitter juvenile onset Parkinson disease 19A
  • c.2634+18C>T Single submitter juvenile onset Parkinson disease 19A
  • c.2635-62G>A Single submitter
  • c.2635-64del Single submitter
  • c.2811+229T>C Single submitter
  • c.344+12C>A Single submitter juvenile onset Parkinson disease 19A
  • c.344+12C>T Single submitter juvenile onset Parkinson disease 19A
  • c.344+297del Single submitter
  • c.345-20C>T Single submitter juvenile onset Parkinson disease 19A
  • c.543+10T>G Single submitter juvenile onset Parkinson disease 19A
  • c.544-45G>A Single submitter
  • c.666+10C>G Single submitter juvenile onset Parkinson disease 19A
  • c.666+19T>G Single submitter juvenile onset Parkinson disease 19A
  • c.666+288A>C Single submitter
  • c.667-17T>G Single submitter juvenile onset Parkinson disease 19A
  • c.667-18A>T Single submitter juvenile onset Parkinson disease 19A
  • c.801-14A>C Single submitter juvenile onset Parkinson disease 19A
  • c.995+16T>C Single submitter juvenile onset Parkinson disease 19A
  • c.995+218C>A Single submitter
  • c.995+272A>G Single submitter
  • c.995+54G>T Single submitter
  • c.996-14G>T Single submitter juvenile onset Parkinson disease 19A
  • c.996-15G>T Single submitter juvenile onset Parkinson disease 19A
  • c.-108G>A Single submitter
  • p.Ala227= Single submitter juvenile onset Parkinson disease 19A
  • p.Ala572= Single submitter juvenile onset Parkinson disease 19A
  • p.Ala66= Single submitter juvenile onset Parkinson disease 19A
  • p.Ala700Thr Single submitter Inborn genetic diseases
  • p.Ala737= Single submitter juvenile onset Parkinson disease 19A
  • p.Ala770= Single submitter juvenile onset Parkinson disease 19A
  • p.Ala87= Single submitter
  • p.Arg250= Single submitter juvenile onset Parkinson disease 19A
  • p.Arg52= Single submitter juvenile onset Parkinson disease 19A
  • p.Asn197= Single submitter juvenile onset Parkinson disease 19A
  • p.Asn658= Single submitter juvenile onset Parkinson disease 19A
  • p.Asn687= Single submitter
  • p.Asn821= Single submitter juvenile onset Parkinson disease 19A
  • p.Asp352= Single submitter
  • p.Asp62= Single submitter juvenile onset Parkinson disease 19A
  • p.Asp70= Single submitter juvenile onset Parkinson disease 19A
  • p.Gln39= Single submitter juvenile onset Parkinson disease 19A
  • p.Gln423= Single submitter juvenile onset Parkinson disease 19A
  • p.Gln689= Single submitter juvenile onset Parkinson disease 19A
  • p.Gln791= Single submitter
  • p.Glu511= Single submitter juvenile onset Parkinson disease 19A
  • p.Glu72= Single submitter juvenile onset Parkinson disease 19A
  • p.Glu881= Single submitter juvenile onset Parkinson disease 19A
  • p.Glu962= Single submitter
  • p.Gly740= Single submitter juvenile onset Parkinson disease 19A
  • p.Leu251= Single submitter juvenile onset Parkinson disease 19A
  • p.Leu461= Single submitter juvenile onset Parkinson disease 19A
  • p.Leu90= Single submitter juvenile onset Parkinson disease 19A
  • p.Leu901= Single submitter juvenile onset Parkinson disease 19A
  • p.Lys395= Single submitter juvenile onset Parkinson disease 19A
  • p.Lys710= Single submitter juvenile onset Parkinson disease 19A
  • p.Phe585= Single submitter juvenile onset Parkinson disease 19A
  • p.Pro257= Single submitter juvenile onset Parkinson disease 19A
  • p.Pro263= Single submitter juvenile onset Parkinson disease 19A
  • p.Pro299= Single submitter juvenile onset Parkinson disease 19A
  • p.Pro523= Single submitter juvenile onset Parkinson disease 19A
  • p.Pro54= Single submitter juvenile onset Parkinson disease 19A
  • p.Pro735= Single submitter juvenile onset Parkinson disease 19A
  • p.Pro762= Single submitter juvenile onset Parkinson disease 19A
  • p.Pro790= Single submitter juvenile onset Parkinson disease 19A
  • p.Ser169= Single submitter juvenile onset Parkinson disease 19A
  • p.Ser229= Single submitter juvenile onset Parkinson disease 19A
  • p.Ser292= Single submitter juvenile onset Parkinson disease 19A
  • p.Ser362= Single submitter
  • p.Ser450= Single submitter juvenile onset Parkinson disease 19A
  • p.Ser608= Single submitter juvenile onset Parkinson disease 19A
  • p.Ser615= Single submitter juvenile onset Parkinson disease 19A
  • p.Ser745= Single submitter juvenile onset Parkinson disease 19A
  • p.Ser766= Single submitter juvenile onset Parkinson disease 19A
  • p.Thr458= Single submitter juvenile onset Parkinson disease 19A
  • p.Thr717= Single submitter juvenile onset Parkinson disease 19A
  • p.Thr741= Single submitter juvenile onset Parkinson disease 19A
  • p.Tyr125= Single submitter juvenile onset Parkinson disease 19A
  • p.Tyr268= Single submitter juvenile onset Parkinson disease 19A
  • p.Tyr477= Single submitter juvenile onset Parkinson disease 19A
  • p.Val165= Single submitter juvenile onset Parkinson disease 19A
  • p.Val554= Single submitter juvenile onset Parkinson disease 19A
  • p.Val930= Single submitter juvenile onset Parkinson disease 19A
  • p.Val933= Single submitter juvenile onset Parkinson disease 19A

Uncertain significance 178