DUSP6 — 88 ClinVar variants
All ClinVar germline DUSP6 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 50 flagged for review →
1 Pathogenic · 2 Conflicting · 15 Benign · 21 Likely benign · 49 Uncertain significance
Full DUSP6 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 50
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 1
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
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DUSP6 p.Asn189Ser
Conflicting
Single submitter
hypogonadotropic hypogonadism 19 with or without anosmia
Predictors lean, ClinVar uncertain 30
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
- DUSP6 p.Ala141Asp Uncertain significance Multiple submitters
-
DUSP6 p.Ala57Thr
Uncertain significance
Multiple submitters
hypogonadotropic hypogonadism 19 with or without anosmia
- DUSP6 p.Asp93Glu Uncertain significance Multiple submitters
- DUSP6 p.Glu32Lys Uncertain significance Multiple submitters
-
DUSP6 p.Phe77Ile
Uncertain significance
Multiple submitters
hypogonadotropic hypogonadism 19 with or without anosmia
- DUSP6 p.Ala11Val Uncertain significance Single submitter
- DUSP6 p.Ala21Val Uncertain significance Single submitter
- DUSP6 p.Ala275Asp Uncertain significance Single submitter
- DUSP6 p.Ala57Asp Uncertain significance Single submitter
- DUSP6 p.Arg89His Uncertain significance Single submitter
- DUSP6 p.Asn189Asp Uncertain significance Single submitter
- DUSP6 p.Asn371Ile Uncertain significance Single submitter
- DUSP6 p.Asp84Glu Uncertain significance Single submitter
- DUSP6 p.Cys155Tyr Uncertain significance Single submitter
- DUSP6 p.Gln270His Uncertain significance Single submitter
- DUSP6 p.Glu344Asp Uncertain significance Single submitter
- DUSP6 p.Gly110Ser Uncertain significance Single submitter
- DUSP6 p.Leu378Pro Uncertain significance Single submitter
- DUSP6 p.Leu71Val Uncertain significance Single submitter
- DUSP6 p.Lys120Gln Uncertain significance Single submitter
- DUSP6 p.Met325Leu Uncertain significance Single submitter
- DUSP6 p.Phe10Leu Uncertain significance Single submitter
- DUSP6 p.Pro188Leu Uncertain significance Single submitter
- DUSP6 p.Pro241Leu Uncertain significance Single submitter
- DUSP6 p.Pro244Ser Uncertain significance Single submitter
- DUSP6 p.Ser12Leu Uncertain significance Single submitter
- DUSP6 p.Ser47Ala Uncertain significance Single submitter
- DUSP6 p.Thr4Arg Uncertain significance Single submitter
- DUSP6 p.Val8Gly Uncertain significance Single submitter
-
DUSP6 p.Leu214Phe
Uncertain significance
No assertion criteria
DUSP6-related disorder
Predictors split 19
The independent predictors disagree with each other — read with care.
- DUSP6 p.Gly30Cys Uncertain significance Multiple submitters
-
DUSP6 p.Val114Leu
Benign
Multiple submitters
hypogonadotropic hypogonadism 19 with or without anosmia
- DUSP6 p.Arg128Trp Uncertain significance Single submitter
- DUSP6 p.Cys353Arg Uncertain significance Single submitter
- DUSP6 p.Gln140His Uncertain significance Single submitter
- DUSP6 p.Gln270Arg Uncertain significance Single submitter
- DUSP6 p.Gly169Asp Uncertain significance Single submitter
- DUSP6 p.Leu117Met Uncertain significance Single submitter
- DUSP6 p.Lys234Glu Uncertain significance Single submitter
- DUSP6 p.Met325Ile Uncertain significance Single submitter
- DUSP6 p.Ser102Arg Uncertain significance Single submitter
- DUSP6 p.Ser137Ile Uncertain significance Single submitter
- DUSP6 p.Ser154Leu Uncertain significance Single submitter
- DUSP6 p.Ser174Cys Uncertain significance Single submitter
-
DUSP6 p.Ser182Phe
Conflicting
Single submitter
hypogonadotropic hypogonadism 19 with or without anosmia
- DUSP6 p.Ser350Cys Uncertain significance Single submitter
- DUSP6 p.Thr365Ile Uncertain significance Single submitter
- DUSP6 p.Val73Met Uncertain significance Single submitter
- DUSP6 p.Val95Met Uncertain significance Single submitter
All DUSP6 variants
Pathogenic 1
- p.Cys39Ter Single submitter hypogonadotropic hypogonadism 19 with or without anosmia
Conflicting classifications of pathogenicity 2
- p.Asn189Ser Single submitter hypogonadotropic hypogonadism 19 with or without anosmia ⚠
- p.Ser182Phe Single submitter hypogonadotropic hypogonadism 19 with or without anosmia ⚠
Benign 15
- c.400+231T>C Multiple submitters
- c.401-113T>A Multiple submitters
- c.401-214G>A Multiple submitters
- c.401-24T>C Multiple submitters
- c.838+119A>C Multiple submitters
- c.*300A>G Multiple submitters
- p.Asp318= Multiple submitters
- p.Ser144Ala Multiple submitters
- p.Val114Leu Multiple submitters hypogonadotropic hypogonadism 19 with or without anosmia ⚠
- c.400+298A>G Single submitter
- c.400+7G>T Single submitter
- c.839-251C>T Single submitter
- c.839-276T>C Single submitter
- c.839-299C>T Single submitter
- p.Ala319= Single submitter
Likely benign 21
- c.400+12G>A Single submitter
- c.401-10G>C Single submitter
- c.401-18C>G Single submitter
- c.401-18C>T Single submitter
- c.838+12_838+15del Single submitter
- c.838+263G>A Single submitter
- c.839-22_839-19del Single submitter
- c.-21C>G Single submitter
- p.Asn249= Single submitter
- p.Asp193= Single submitter
- p.Asp321= Single submitter
- p.Asp84= Single submitter
- p.Gln42= Single submitter
- p.Leu27= Single submitter
- p.Leu36= Single submitter
- p.Pro72= Single submitter
- p.Ser101= Single submitter
- p.Ser154= Single submitter
- p.Thr365= Single submitter
- p.Thr78= Single submitter
- p.Val95= Single submitter
Uncertain significance 49
- p.Ala141Asp Multiple submitters ⚠
- p.Ala57Thr Multiple submitters hypogonadotropic hypogonadism 19 with or without anosmia ⚠
- p.Asp93Glu Multiple submitters ⚠
- p.Glu32Lys Multiple submitters ⚠
- p.Gly30Cys Multiple submitters ⚠
- p.Phe77Ile Multiple submitters hypogonadotropic hypogonadism 19 with or without anosmia ⚠
- c.838+3G>C Single submitter
- p.Ala11Val Single submitter ⚠
- p.Ala21Val Single submitter ⚠
- p.Ala275Asp Single submitter ⚠
- p.Ala57Asp Single submitter ⚠
- p.Arg128Trp Single submitter ⚠
- p.Arg89His Single submitter ⚠
- p.Asn189Asp Single submitter ⚠
- p.Asn371Ile Single submitter ⚠
- p.Asp84Glu Single submitter ⚠
- p.Cys155Tyr Single submitter ⚠
- p.Cys353Arg Single submitter ⚠
- p.Gln140His Single submitter ⚠
- p.Gln270Arg Single submitter ⚠
- p.Gln270His Single submitter ⚠
- p.Glu344Asp Single submitter ⚠
- p.Gly110Ser Single submitter ⚠
- p.Gly169Asp Single submitter ⚠
- p.Leu117Met Single submitter ⚠
- p.Leu378Pro Single submitter ⚠
- p.Leu71Val Single submitter ⚠
- p.Lys120Gln Single submitter ⚠
- p.Lys234Glu Single submitter ⚠
- p.Met325Ile Single submitter ⚠
- p.Met325Leu Single submitter ⚠
- p.Phe10Leu Single submitter ⚠
- p.Pro188Leu Single submitter ⚠
- p.Pro241Leu Single submitter ⚠
- p.Pro244Ser Single submitter ⚠
- p.Ser102Arg Single submitter ⚠
- p.Ser12Leu Single submitter ⚠
- p.Ser137Ile Single submitter ⚠
- p.Ser154Leu Single submitter ⚠
- p.Ser174Cys Single submitter ⚠
- p.Ser350Cys Single submitter ⚠
- p.Ser47Ala Single submitter ⚠
- p.Thr365Ile Single submitter ⚠
- p.Thr4Arg Single submitter ⚠
- p.Val301Phe Single submitter
- p.Val73Met Single submitter ⚠
- p.Val8Gly Single submitter ⚠
- p.Val95Met Single submitter ⚠
- p.Leu214Phe No assertion criteria DUSP6-related disorder ⚠