ESR2 — 191 ClinVar variants
All ClinVar germline ESR2 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 95 flagged for review →
1 Pathogenic · 4 Conflicting · 34 Benign · 3 Benign/Likely benign · 49 Likely benign · 100 Uncertain significance
Full ESR2 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 95
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors vs ClinVar 1
ClinVar calls these pathogenic, but the computational predictors lean tolerated — the highest-value review flag.
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ESR2 p.Lys314Arg
Pathogenic
No assertion criteria
ovarian dysgenesis 8
Predictors agree, ClinVar conflicts 2
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
Predictors lean, ClinVar uncertain 70
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
- ESR2 p.Ala432Thr Uncertain significance Multiple submitters
- ESR2 p.Arg230Gln Uncertain significance Multiple submitters
- ESR2 p.Arg346Cys Uncertain significance Multiple submitters
- ESR2 p.Asp154Asn Uncertain significance Multiple submitters
- ESR2 p.Cys169Phe Uncertain significance Multiple submitters
- ESR2 p.Gly243Asp Uncertain significance Multiple submitters
- ESR2 p.Leu228Pro Uncertain significance Multiple submitters
- ESR2 p.Leu462Pro Uncertain significance Multiple submitters
- ESR2 p.Lys368Glu Uncertain significance Multiple submitters
- ESR2 p.Pro83Ser Uncertain significance Multiple submitters
- ESR2 p.Val433Met Uncertain significance Multiple submitters
- ESR2 p.Ala100Thr Uncertain significance Single submitter
- ESR2 p.Ala100Val Uncertain significance Single submitter
- ESR2 p.Ala150Thr Uncertain significance Single submitter
- ESR2 p.Ala252Thr Uncertain significance Single submitter
- ESR2 p.Arg132Gly Uncertain significance Single submitter
- ESR2 p.Arg205Leu Uncertain significance Single submitter
- ESR2 p.Arg207Trp Uncertain significance Single submitter
- ESR2 p.Arg254Pro Uncertain significance Single submitter
- ESR2 p.Arg256Trp Uncertain significance Single submitter
- ESR2 p.Arg71Trp Uncertain significance Single submitter
- ESR2 p.Arg93His Uncertain significance Single submitter
- ESR2 p.Asn55Thr Uncertain significance Single submitter
- ESR2 p.Asn77Lys Uncertain significance Single submitter
- ESR2 p.Asp236His Uncertain significance Single submitter
- ESR2 p.Cys217Arg Uncertain significance Single submitter
- ESR2 p.Glu122Lys Uncertain significance Single submitter
- ESR2 p.Glu291Lys Uncertain significance Single submitter
- ESR2 p.Glu516Lys Uncertain significance Single submitter
- ESR2 p.Glu522Gln Uncertain significance Single submitter
- ESR2 p.Gly28Ser Uncertain significance Single submitter
- ESR2 p.Gly502Arg Uncertain significance Single submitter
- ESR2 p.Gly509Glu Uncertain significance Single submitter
- ESR2 p.Gly509Trp Uncertain significance Single submitter
- ESR2 p.Gly509Val Uncertain significance Single submitter
- ESR2 p.Gly67Ser Uncertain significance Single submitter
- ESR2 p.His350Tyr Uncertain significance Single submitter
- ESR2 p.Ile282Val Uncertain significance Single submitter
- ESR2 p.Ile348Val Uncertain significance Single submitter
- ESR2 p.Leu259Pro Uncertain significance Single submitter
- ESR2 p.Leu301Val Uncertain significance Single submitter
- ESR2 p.Leu324Arg Uncertain significance Single submitter
- ESR2 p.Leu339Phe Uncertain significance Single submitter
- ESR2 p.Lys143Arg Uncertain significance Single submitter
- ESR2 p.Lys246Gln Uncertain significance Single submitter
- ESR2 p.Lys246Glu Uncertain significance Single submitter
- ESR2 p.Lys353Met Uncertain significance Single submitter
- ESR2 p.Met341Ile Uncertain significance Single submitter
- ESR2 p.Met410Thr Uncertain significance Single submitter
- ESR2 p.Pro118Leu Uncertain significance Single submitter
- ESR2 p.Pro253Thr Uncertain significance Single submitter
- ESR2 p.Pro285Ser Uncertain significance Single submitter
- ESR2 p.Ser165Leu Uncertain significance Single submitter
- ESR2 p.Ser283Arg Uncertain significance Single submitter
- ESR2 p.Ser29Tyr Uncertain significance Single submitter
- ESR2 p.Ser333Asn Uncertain significance Single submitter
- ESR2 p.Ser423Asn Uncertain significance Single submitter
- ESR2 p.Ser444Asn Uncertain significance Single submitter
- ESR2 p.Ser520Ile Uncertain significance Single submitter
- ESR2 p.Ser6Ala Uncertain significance Single submitter
- ESR2 p.Ser9Ile Uncertain significance Single submitter
- ESR2 p.Thr271Ile Uncertain significance Single submitter
- ESR2 p.Thr415Ile Uncertain significance Single submitter
- ESR2 p.Tyr159His Uncertain significance Single submitter
- ESR2 p.Val128Leu Uncertain significance Single submitter
- ESR2 p.Val163Phe Uncertain significance Single submitter
- ESR2 p.Val37Ile Uncertain significance Single submitter
- ESR2 p.Val465Ile Uncertain significance Single submitter
- ESR2 p.Val499Met Uncertain significance Single submitter
- ESR2 p.Val78Leu Uncertain significance Single submitter
Predictors split 22
The independent predictors disagree with each other — read with care.
- ESR2 p.Arg221Gly Likely benign Multiple submitters
- ESR2 p.Arg388Gln Uncertain significance Multiple submitters
-
ESR2 p.Asn407Ser
Uncertain significance
Multiple submitters
ovarian dysgenesis 8
- ESR2 p.Gln267His Benign Multiple submitters
- ESR2 p.Trp439Cys Uncertain significance Multiple submitters
- ESR2 p.Ala302Ser Uncertain significance Single submitter
- ESR2 p.Arg329Trp Uncertain significance Single submitter
- ESR2 p.Asp349Val Uncertain significance Single submitter
- ESR2 p.Gln451Lys Uncertain significance Single submitter
- ESR2 p.Glu266Lys Uncertain significance Single submitter
- ESR2 p.Glu366Gln Uncertain significance Single submitter
- ESR2 p.Ile348Thr Uncertain significance Single submitter
- ESR2 p.Leu406Val Uncertain significance Single submitter
- ESR2 p.Met309Val Uncertain significance Single submitter
- ESR2 p.Ser264Arg Uncertain significance Single submitter
- ESR2 p.Ser333Gly Uncertain significance Single submitter
- ESR2 p.Ser422Gly Uncertain significance Single submitter
- ESR2 p.Thr384Ile Uncertain significance Single submitter
- ESR2 p.Tyr210Cys Uncertain significance Single submitter
- ESR2 p.Tyr49Asp Uncertain significance Single submitter
-
ESR2 p.Val370Ile
Uncertain significance
Single submitter
ovarian dysgenesis 8
- ESR2 p.Leu426Arg Uncertain significance No assertion criteria
All ESR2 variants
Pathogenic 1
- p.Lys314Arg No assertion criteria ovarian dysgenesis 8 ⚠
Conflicting classifications of pathogenicity 4
- p.Asn181del Single submitter
- p.Cys503Tyr Single submitter ⚠
- p.Gln238_Lys244del Single submitter
- p.Ile22Val Single submitter ⚠
Benign 34
- c.1406+232G>C Multiple submitters
- c.1406+242A>G Multiple submitters
- c.1406+258G>C Multiple submitters
- c.1406+44T>C Multiple submitters
- c.1407-251G>A Multiple submitters
- c.1407-258C>T Multiple submitters
- c.1407-4A>G Multiple submitters
- c.652+17C>T Multiple submitters
- c.*169A>G Multiple submitters
- c.*39G>A Multiple submitters
- c.*56G>A Multiple submitters
- c.*93A>G Multiple submitters
- p.Gln267His Multiple submitters ⚠
- p.Leu392= Multiple submitters
- p.Lys474Thr Multiple submitters
- p.Tyr210= Multiple submitters
- p.Val328= Multiple submitters
- c.1092-232T>G Single submitter
- c.1092-296T>G Single submitter
- c.1407-662A>C Single submitter
- c.362+19C>A Single submitter
- c.363-299T>C Single submitter
- c.363-71_363-70dup Single submitter
- c.363-71dup Single submitter
- c.653-237_653-236del Single submitter
- c.953-10C>T Single submitter
- c.-91+2334T>G Single submitter
- c.*4768T>C Single submitter
- p.Ala156= Single submitter
- p.Cys133= Single submitter
- p.Cys334= Single submitter
- p.Glu337= Single submitter
- p.Ser15= Single submitter
- p.Ser157= Single submitter
Benign/Likely benign 3
Likely benign 49
- p.Arg221Gly Multiple submitters ⚠
- p.Arg231= Multiple submitters
- p.His27= Multiple submitters
- p.Leu270Phe Multiple submitters
- p.Lys304= Multiple submitters
- p.Thr123= Multiple submitters
- p.Thr434= Multiple submitters
- c.1092-13C>T Single submitter
- c.1407-15T>G Single submitter
- c.363-118A>G Single submitter
- c.535+14G>A Single submitter
- c.535+9G>A Single submitter
- c.536-16T>C Single submitter
- c.653-6C>T Single submitter
- c.953-19C>T Single submitter
- p.Ala100= Single submitter
- p.Ala134Thr Single submitter
- p.Ala235= Single submitter
- p.Ala252Val Single submitter
- p.Ala420= Single submitter
- p.Ala427Val Single submitter
- p.Ala515= Single submitter
- p.Arg132His Single submitter
- p.Arg254= Single submitter
- p.Arg501= Single submitter
- p.Asn61Ser Single submitter
- p.Asp145= Single submitter
- p.Asp261= Single submitter
- p.Gln20= Single submitter
- p.Gln528= Single submitter
- p.Glu222= Single submitter
- p.Glu516= Single submitter
- p.Gly250Ser Single submitter
- p.Gly367= Single submitter
- p.Ile282= Single submitter
- p.Leu413Val Single submitter
- p.Leu461= Single submitter
- p.Leu490= Single submitter
- p.Phe325= Single submitter
- p.Pro514= Single submitter
- p.Ser112Leu Single submitter
- p.Ser165= Single submitter
- p.Ser311Gly Single submitter
- p.Ser35= Single submitter
- p.Ser444= Single submitter
- p.Ser510= Single submitter
- p.Tyr159= Single submitter
- p.Val485= Single submitter
- c.536-7G>T No assertion criteria ESR2-related disorder
Uncertain significance 100
- p.Ala432Thr Multiple submitters ⚠
- p.Arg230Gln Multiple submitters ⚠
- p.Arg346Cys Multiple submitters ⚠
- p.Arg388Gln Multiple submitters ⚠
- p.Asn407Ser Multiple submitters ovarian dysgenesis 8 ⚠
- p.Asp154Asn Multiple submitters ⚠
- p.Cys169Phe Multiple submitters ⚠
- p.Gly243Asp Multiple submitters ⚠
- p.Leu228Pro Multiple submitters ⚠
- p.Leu462Pro Multiple submitters ⚠
- p.Lys368Glu Multiple submitters ⚠
- p.Pro83Ser Multiple submitters ⚠
- p.Trp439Cys Multiple submitters ⚠
- p.Val433Met Multiple submitters ⚠
- p.Ala100Thr Single submitter ⚠
- p.Ala100Val Single submitter ⚠
- p.Ala150Thr Single submitter ⚠
- p.Ala252Thr Single submitter ⚠
- p.Ala302Ser Single submitter ⚠
- p.Arg132Gly Single submitter ⚠
- p.Arg197fs Single submitter
- p.Arg205Leu Single submitter ⚠
- p.Arg207Trp Single submitter ⚠
- p.Arg254Pro Single submitter ⚠
- p.Arg256Trp Single submitter ⚠
- p.Arg329Trp Single submitter ⚠
- p.Arg388Ter Single submitter
- p.Arg71Trp Single submitter ⚠
- p.Arg93His Single submitter ⚠
- p.Asn55Thr Single submitter ⚠
- p.Asn5fs Single submitter
- p.Asn77Lys Single submitter ⚠
- p.Asp236His Single submitter ⚠
- p.Asp349Val Single submitter ⚠
- p.Cys217Arg Single submitter ⚠
- p.Gln451Lys Single submitter ⚠
- p.Gln528fs Single submitter
- p.Glu122Lys Single submitter ⚠
- p.Glu266Lys Single submitter ⚠
- p.Glu291Lys Single submitter ⚠
- p.Glu366Gln Single submitter ⚠
- p.Glu396fs Single submitter
- p.Glu516Lys Single submitter ⚠
- p.Glu522Gln Single submitter ⚠
- p.Gly162= Single submitter
- p.Gly168= Single submitter
- p.Gly28Ser Single submitter ⚠
- p.Gly352fs Single submitter
- p.Gly502Arg Single submitter ⚠
- p.Gly509Glu Single submitter ⚠
- p.Gly509Trp Single submitter ⚠
- p.Gly509Val Single submitter ⚠
- p.Gly67Ser Single submitter ⚠
- p.His350Tyr Single submitter ⚠
- p.Ile282Val Single submitter ⚠
- p.Ile348Thr Single submitter ⚠
- p.Ile348Val Single submitter ⚠
- p.Leu259Pro Single submitter ⚠
- p.Leu301Val Single submitter ⚠
- p.Leu324Arg Single submitter ⚠
- p.Leu339Phe Single submitter ⚠
- p.Leu406Val Single submitter ⚠
- p.Lys143Arg Single submitter ⚠
- p.Lys246Gln Single submitter ⚠
- p.Lys246Glu Single submitter ⚠
- p.Lys353Met Single submitter ⚠
- p.Met309Val Single submitter ⚠
- p.Met341Ile Single submitter ⚠
- p.Met410Thr Single submitter ⚠
- p.Pro118Leu Single submitter ⚠
- p.Pro253Thr Single submitter ⚠
- p.Pro285Ser Single submitter ⚠
- p.Ser112Ter Single submitter
- p.Ser165Leu Single submitter ⚠
- p.Ser264Arg Single submitter ⚠
- p.Ser283Arg Single submitter ⚠
- p.Ser29Tyr Single submitter ⚠
- p.Ser333Asn Single submitter ⚠
- p.Ser333Gly Single submitter ⚠
- p.Ser422Gly Single submitter ⚠
- p.Ser423Asn Single submitter ⚠
- p.Ser444Asn Single submitter ⚠
- p.Ser520Ile Single submitter ⚠
- p.Ser6Ala Single submitter ⚠
- p.Ser9Ile Single submitter ⚠
- p.Thr271Ile Single submitter ⚠
- p.Thr384Ile Single submitter ⚠
- p.Thr415Ile Single submitter ⚠
- p.Tyr159His Single submitter ⚠
- p.Tyr210Cys Single submitter ⚠
- p.Tyr49Asp Single submitter ⚠
- p.Val128Leu Single submitter ⚠
- p.Val163Phe Single submitter ⚠
- p.Val370Ile Single submitter ovarian dysgenesis 8 ⚠
- p.Val37Ile Single submitter ⚠
- p.Val440Leu Single submitter
- p.Val465Ile Single submitter ⚠
- p.Val499Met Single submitter ⚠
- p.Val78Leu Single submitter ⚠
- p.Leu426Arg No assertion criteria ⚠