ETHE1 — 431 ClinVar variants

All ClinVar germline ETHE1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 81 flagged for review →

35 Pathogenic · 11 Pathogenic/Likely pathogenic · 51 Likely pathogenic · 11 Conflicting · 24 Benign · 1 Benign/Likely benign · 206 Likely benign · 92 Uncertain significance

Full ETHE1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 81

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 3

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 56

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 22

The independent predictors disagree with each other — read with care.

All ETHE1 variants

Pathogenic 35

  • c.505+1G>A Expert panel ethylmalonic encephalopathy
  • c.505+1G>T Expert panel ethylmalonic encephalopathy
  • p.Arg163Gln Expert panel ethylmalonic encephalopathy
  • p.Arg163Trp Expert panel ethylmalonic encephalopathy
  • p.Val202fs Expert panel ethylmalonic encephalopathy
  • p.Glu44fs Multiple submitters ethylmalonic encephalopathy
  • p.Leu185Arg Multiple submitters ETHE1-related disorders
  • p.Met1Ile Multiple submitters ethylmalonic encephalopathy
  • p.Thr136Ala Multiple submitters ethylmalonic encephalopathy
  • p.Tyr74Ter Multiple submitters ethylmalonic encephalopathy
  • p.Ala155fs Single submitter ethylmalonic encephalopathy
  • p.Ala21fs Single submitter ethylmalonic encephalopathy
  • p.Arg43fs Single submitter ethylmalonic encephalopathy
  • p.Gln109Ter Single submitter ethylmalonic encephalopathy
  • p.Gln12Ter Single submitter ethylmalonic encephalopathy
  • p.Gln15fs Single submitter ethylmalonic encephalopathy
  • p.Gln99Ter Single submitter ethylmalonic encephalopathy
  • p.Glu208Ter Single submitter ethylmalonic encephalopathy
  • p.Gly134fs Single submitter ethylmalonic encephalopathy
  • p.Gly138fs Single submitter ethylmalonic encephalopathy
  • p.Gly87fs Single submitter ethylmalonic encephalopathy
  • p.His81fs Single submitter ethylmalonic encephalopathy
  • p.Ile85fs Single submitter ethylmalonic encephalopathy
  • p.Leu157fs Single submitter ethylmalonic encephalopathy
  • p.Leu215_Thr216insTer Single submitter ethylmalonic encephalopathy
  • p.Met1Leu Single submitter ethylmalonic encephalopathy
  • p.Met1Lys Single submitter ethylmalonic encephalopathy
  • p.Pro133fs Single submitter ethylmalonic encephalopathy
  • p.Tyr192Ter Single submitter
  • p.Val140fs Single submitter ethylmalonic encephalopathy
  • p.Val5fs Single submitter ethylmalonic encephalopathy
  • p.Val8fs Single submitter ethylmalonic encephalopathy
  • c.505+1G>C No assertion criteria ethylmalonic encephalopathy
  • c.81+1del No assertion criteria ethylmalonic encephalopathy
  • p.His147fs No assertion criteria ethylmalonic encephalopathy

Pathogenic/Likely pathogenic 11

  • c.375+5G>A Multiple submitters ethylmalonic encephalopathy
  • c.596-1G>A Multiple submitters ethylmalonic encephalopathy
  • p.Arg130fs Multiple submitters ethylmalonic encephalopathy
  • p.Asp196Asn Multiple submitters ethylmalonic encephalopathy ⚠
  • p.Gln15Ter Multiple submitters ethylmalonic encephalopathy
  • p.Gln235fs Multiple submitters ethylmalonic encephalopathy
  • p.Gln27Lys Multiple submitters ETHE1-related disorders
  • p.Gln27Ter Multiple submitters ethylmalonic encephalopathy
  • p.Gln63fs Multiple submitters ethylmalonic encephalopathy
  • p.Gln63Ter Multiple submitters ethylmalonic encephalopathy
  • p.Met1Thr Multiple submitters ethylmalonic encephalopathy

Likely pathogenic 51

  • c.227-1G>T Multiple submitters ethylmalonic encephalopathy
  • c.227-2A>C Multiple submitters ethylmalonic encephalopathy
  • c.506-2A>G Multiple submitters ethylmalonic encephalopathy
  • c.595+2T>A Multiple submitters ethylmalonic encephalopathy
  • c.595+2T>G Multiple submitters ethylmalonic encephalopathy
  • c.596-2A>G Multiple submitters ethylmalonic encephalopathy
  • c.596-2A>T Multiple submitters ethylmalonic encephalopathy
  • c.81+1G>T Multiple submitters ethylmalonic encephalopathy
  • p.Asp165Gly Multiple submitters ETHE1-related disorders
  • p.Asp196His Multiple submitters ethylmalonic encephalopathy
  • p.Cys161Tyr Multiple submitters ethylmalonic encephalopathy
  • c.226+1del Single submitter ethylmalonic encephalopathy
  • c.226+1G>T Single submitter ethylmalonic encephalopathy
  • c.227-1G>A Single submitter ethylmalonic encephalopathy
  • c.227-2A>G Single submitter ethylmalonic encephalopathy
  • c.375+1G>A Single submitter ethylmalonic encephalopathy
  • c.375+1G>T Single submitter ethylmalonic encephalopathy
  • c.376-2A>G Single submitter ethylmalonic encephalopathy
  • c.506-1G>A Single submitter ethylmalonic encephalopathy
  • c.82-2A>G Single submitter ethylmalonic encephalopathy
  • c.82-5_83delinsGGAG Single submitter ethylmalonic encephalopathy
  • c.82-96_119del Single submitter ethylmalonic encephalopathy
  • p.Arg159Cys Single submitter ethylmalonic encephalopathy
  • p.Arg163Leu Single submitter
  • p.Arg214fs Single submitter ethylmalonic encephalopathy
  • p.Asn228_Leu229insTer Single submitter ethylmalonic encephalopathy
  • p.Asn77fs Single submitter ETHE1-related disorders
  • p.Asp154fs Single submitter ethylmalonic encephalopathy
  • p.Asp188_Cys189insTer Single submitter ethylmalonic encephalopathy
  • p.Gln167fs Single submitter ethylmalonic encephalopathy
  • p.Gln167Ter Single submitter ethylmalonic encephalopathy
  • p.Gln235Ter Single submitter ethylmalonic encephalopathy
  • p.Glu221Ter Single submitter ethylmalonic encephalopathy
  • p.Glu56_Thr57insIleLeuGlu Single submitter ethylmalonic encephalopathy
  • p.Gly17fs Single submitter ethylmalonic encephalopathy
  • p.Gly248Arg Single submitter
  • p.Ile182fs Single submitter ethylmalonic encephalopathy
  • p.Ile23fs Single submitter ethylmalonic encephalopathy
  • p.Leu105fs Single submitter ethylmalonic encephalopathy
  • p.Leu70fs Single submitter ethylmalonic encephalopathy
  • p.Met1Val Single submitter ethylmalonic encephalopathy
  • p.Phe166fs Single submitter ethylmalonic encephalopathy
  • p.Phe239fs Single submitter ethylmalonic encephalopathy
  • p.Pro186fs Single submitter ethylmalonic encephalopathy
  • p.Ser19fs Single submitter ethylmalonic encephalopathy
  • p.Ser88Leu Single submitter ethylmalonic encephalopathy ⚠
  • p.Ser88Ter Single submitter ethylmalonic encephalopathy
  • p.Thr136Ser Single submitter ethylmalonic encephalopathy ⚠
  • p.Thr78Ile Single submitter ethylmalonic encephalopathy
  • p.Val5_Leu6insTer Single submitter ethylmalonic encephalopathy
  • p.His198fs No assertion criteria ethylmalonic encephalopathy

Conflicting classifications of pathogenicity 11

  • c.596-6C>T Single submitter ethylmalonic encephalopathy
  • p.Ala62Thr Single submitter Inborn genetic diseases ⚠
  • p.Arg163= Single submitter ethylmalonic encephalopathy
  • p.Arg46= Single submitter ethylmalonic encephalopathy
  • p.Asp165His Single submitter ethylmalonic encephalopathy ⚠
  • p.Asp196Val Single submitter ethylmalonic encephalopathy ⚠
  • p.Glu3= Single submitter ethylmalonic encephalopathy
  • p.His179Tyr Single submitter ethylmalonic encephalopathy ⚠
  • p.Ser119= Single submitter ethylmalonic encephalopathy
  • p.Ser203Phe Single submitter ethylmalonic encephalopathy ⚠
  • p.Thr201fs Single submitter ethylmalonic encephalopathy

Benign 24

Benign/Likely benign 1

  • c.-62C>G Multiple submitters ethylmalonic encephalopathy

Likely benign 206

  • c.227-17C>T Multiple submitters ethylmalonic encephalopathy
  • c.375+19C>A Multiple submitters ethylmalonic encephalopathy
  • c.375+257G>C Multiple submitters
  • c.375+50A>C Multiple submitters
  • c.596-8G>A Multiple submitters ethylmalonic encephalopathy
  • c.81+26G>T Multiple submitters
  • c.82-16G>C Multiple submitters ethylmalonic encephalopathy
  • p.Asn228= Multiple submitters ethylmalonic encephalopathy
  • p.Gly160= Multiple submitters ethylmalonic encephalopathy
  • p.His195= Multiple submitters ethylmalonic encephalopathy
  • p.Ile114Phe Multiple submitters Inborn genetic diseases
  • p.Leu127= Multiple submitters ethylmalonic encephalopathy
  • p.Leu50= Multiple submitters ethylmalonic encephalopathy
  • c.226+10G>A Single submitter ethylmalonic encephalopathy
  • c.226+10G>C Single submitter ethylmalonic encephalopathy
  • c.226+12G>T Single submitter ethylmalonic encephalopathy
  • c.226+8C>G Single submitter ethylmalonic encephalopathy
  • c.227-11C>G Single submitter ethylmalonic encephalopathy
  • c.227-12TC[2] Single submitter ethylmalonic encephalopathy
  • c.227-12TC[5] Single submitter ethylmalonic encephalopathy
  • c.227-13C>G Single submitter ethylmalonic encephalopathy
  • c.227-13C>T Single submitter ethylmalonic encephalopathy
  • c.227-18C>T Single submitter ethylmalonic encephalopathy
  • c.227-8T>C Single submitter ethylmalonic encephalopathy
  • c.227-9C>T Single submitter ethylmalonic encephalopathy
  • c.375+10G>A Single submitter ethylmalonic encephalopathy
  • c.375+10G>T Single submitter ethylmalonic encephalopathy
  • c.375+12G>A Single submitter ethylmalonic encephalopathy
  • c.375+13_375+16dup Single submitter ethylmalonic encephalopathy
  • c.375+13C>G Single submitter ethylmalonic encephalopathy
  • c.375+20C>A Single submitter ethylmalonic encephalopathy
  • c.375+7T>C Single submitter ethylmalonic encephalopathy
  • c.375+9G>C Single submitter ethylmalonic encephalopathy
  • c.376-10C>A Single submitter ethylmalonic encephalopathy
  • c.376-11del Single submitter ethylmalonic encephalopathy
  • c.376-12C>A Single submitter ethylmalonic encephalopathy
  • c.376-12C>T Single submitter ethylmalonic encephalopathy
  • c.376-13C>G Single submitter ethylmalonic encephalopathy
  • c.376-14T>C Single submitter ethylmalonic encephalopathy
  • c.376-16C>T Single submitter ethylmalonic encephalopathy
  • c.376-4C>T Single submitter ethylmalonic encephalopathy
  • c.376-5G>C Single submitter ethylmalonic encephalopathy
  • c.376-5G>T Single submitter ethylmalonic encephalopathy
  • c.376-6del Single submitter ethylmalonic encephalopathy
  • c.376-7C>T Single submitter ethylmalonic encephalopathy
  • c.505+183C>T Single submitter
  • c.505+18C>T Single submitter ethylmalonic encephalopathy
  • c.505+20A>G Single submitter ethylmalonic encephalopathy
  • c.505+296G>A Single submitter
  • c.505+302C>T Single submitter
  • c.505+7A>G Single submitter ethylmalonic encephalopathy
  • c.505+8G>A Single submitter ethylmalonic encephalopathy
  • c.505+9C>T Single submitter ethylmalonic encephalopathy
  • c.506-10C>G Single submitter ethylmalonic encephalopathy
  • c.506-10C>T Single submitter ethylmalonic encephalopathy
  • c.506-286G>C Single submitter
  • c.506-4C>G Single submitter ethylmalonic encephalopathy
  • c.506-6C>T Single submitter ethylmalonic encephalopathy
  • c.506-8T>A Single submitter ethylmalonic encephalopathy
  • c.595+1_595+9dup Single submitter ethylmalonic encephalopathy
  • c.595+10T>C Single submitter ethylmalonic encephalopathy
  • c.595+12C>T Single submitter ethylmalonic encephalopathy
  • c.595+142del Single submitter
  • c.595+14G>A Single submitter ethylmalonic encephalopathy
  • c.595+15G>A Single submitter ethylmalonic encephalopathy
  • c.595+18G>A Single submitter ethylmalonic encephalopathy
  • c.595+19A>G Single submitter ethylmalonic encephalopathy
  • c.595+7G>T Single submitter ethylmalonic encephalopathy
  • c.596-13C>T Single submitter ethylmalonic encephalopathy
  • c.596-17C>T Single submitter ethylmalonic encephalopathy
  • c.596-18C>T Single submitter ethylmalonic encephalopathy
  • c.596-4C>T Single submitter ethylmalonic encephalopathy
  • c.596-7C>T Single submitter ethylmalonic encephalopathy
  • c.712+13G>A Single submitter ethylmalonic encephalopathy
  • c.712+15A>T Single submitter ethylmalonic encephalopathy
  • c.712+17C>A Single submitter ethylmalonic encephalopathy
  • c.712+54T>C Single submitter
  • c.712+7A>C Single submitter ethylmalonic encephalopathy
  • c.713-11C>A Single submitter ethylmalonic encephalopathy
  • c.713-7C>T Single submitter ethylmalonic encephalopathy
  • c.713-8C>G Single submitter ethylmalonic encephalopathy
  • c.81+10G>C Single submitter ethylmalonic encephalopathy
  • c.81+10G>T Single submitter ethylmalonic encephalopathy
  • c.81+121G>A Single submitter
  • c.81+13G>A Single submitter ethylmalonic encephalopathy
  • c.81+16C>A Single submitter ethylmalonic encephalopathy
  • c.81+7del Single submitter ethylmalonic encephalopathy
  • c.81+7G>C Single submitter ethylmalonic encephalopathy
  • c.81+94G>A Single submitter
  • c.82-12C>T Single submitter ethylmalonic encephalopathy
  • c.82-13C>T Single submitter ethylmalonic encephalopathy
  • c.82-15G>C Single submitter ethylmalonic encephalopathy
  • c.82-16G>A Single submitter ethylmalonic encephalopathy
  • c.82-19del Single submitter ethylmalonic encephalopathy
  • c.82-20C>T Single submitter ethylmalonic encephalopathy
  • c.82-8G>C Single submitter ethylmalonic encephalopathy
  • c.82-9C>G Single submitter ethylmalonic encephalopathy
  • c.82-9C>T Single submitter ethylmalonic encephalopathy
  • c.-20C>T Single submitter
  • c.-24A>C Single submitter
  • p.Ala108= Single submitter ethylmalonic encephalopathy
  • p.Ala110= Single submitter ethylmalonic encephalopathy
  • p.Ala126= Single submitter ethylmalonic encephalopathy
  • p.Ala171= Single submitter ethylmalonic encephalopathy
  • p.Ala21= Single submitter ethylmalonic encephalopathy
  • p.Ala254= Single submitter ethylmalonic encephalopathy
  • p.Ala48= Single submitter ethylmalonic encephalopathy
  • p.Ala58= Single submitter ethylmalonic encephalopathy
  • p.Ala62= Single submitter ethylmalonic encephalopathy
  • p.Ala82= Single submitter ethylmalonic encephalopathy
  • p.Arg10= Single submitter ethylmalonic encephalopathy
  • p.Arg104= Single submitter ethylmalonic encephalopathy
  • p.Arg124= Single submitter ethylmalonic encephalopathy
  • p.Arg16= Single submitter ethylmalonic encephalopathy
  • p.Arg214= Single submitter ethylmalonic encephalopathy
  • p.Arg26= Single submitter ethylmalonic encephalopathy
  • p.Arg71= Single submitter ethylmalonic encephalopathy
  • p.Asn244= Single submitter ethylmalonic encephalopathy
  • p.Asp111= Single submitter ethylmalonic encephalopathy
  • p.Asp154= Single submitter ethylmalonic encephalopathy
  • p.Asp196= Single submitter ethylmalonic encephalopathy
  • p.Cys139= Single submitter ethylmalonic encephalopathy
  • p.Cys161= Single submitter ethylmalonic encephalopathy
  • p.Cys247= Single submitter ethylmalonic encephalopathy
  • p.Gln12= Single submitter ethylmalonic encephalopathy
  • p.Glu180= Single submitter ethylmalonic encephalopathy
  • p.Glu206= Single submitter ethylmalonic encephalopathy
  • p.Glu207= Single submitter ethylmalonic encephalopathy
  • p.Glu208= Single submitter ethylmalonic encephalopathy
  • p.Glu220= Single submitter ethylmalonic encephalopathy
  • p.Glu221= Single submitter ethylmalonic encephalopathy
  • p.Glu30= Single submitter ethylmalonic encephalopathy
  • p.Glu47= Single submitter ethylmalonic encephalopathy
  • p.Glu56= Single submitter ethylmalonic encephalopathy
  • p.Gly117= Single submitter ethylmalonic encephalopathy
  • p.Gly123= Single submitter ethylmalonic encephalopathy
  • p.Gly134= Single submitter ethylmalonic encephalopathy
  • p.Gly153= Single submitter ethylmalonic encephalopathy
  • p.Gly162= Single submitter ethylmalonic encephalopathy
  • p.Gly18= Single submitter ethylmalonic encephalopathy
  • p.Gly199= Single submitter ethylmalonic encephalopathy
  • p.Gly227Asp Single submitter Inborn genetic diseases
  • p.Gly69= Single submitter ethylmalonic encephalopathy
  • p.Gly87= Single submitter ethylmalonic encephalopathy
  • p.His113= Single submitter ethylmalonic encephalopathy
  • p.His135= Single submitter ethylmalonic encephalopathy
  • p.His176= Single submitter ethylmalonic encephalopathy
  • p.His179= Single submitter ethylmalonic encephalopathy
  • p.His81= Single submitter ethylmalonic encephalopathy
  • p.Ile102= Single submitter ethylmalonic encephalopathy
  • p.Ile225= Single submitter ethylmalonic encephalopathy
  • p.Ile51= Single submitter ethylmalonic encephalopathy
  • p.Ile65= Single submitter ethylmalonic encephalopathy
  • p.Leu144= Single submitter ethylmalonic encephalopathy
  • p.Leu157= Single submitter ethylmalonic encephalopathy
  • p.Leu174= Single submitter ethylmalonic encephalopathy
  • p.Leu190= Single submitter ethylmalonic encephalopathy
  • p.Leu211= Single submitter ethylmalonic encephalopathy
  • p.Leu215= Single submitter ethylmalonic encephalopathy
  • p.Leu24= Single submitter ethylmalonic encephalopathy
  • p.Leu39= Single submitter ethylmalonic encephalopathy
  • p.Leu40= Single submitter ethylmalonic encephalopathy
  • p.Leu55= Single submitter ethylmalonic encephalopathy
  • p.Leu6= Single submitter ethylmalonic encephalopathy
  • p.Leu64= Single submitter ethylmalonic encephalopathy
  • p.Leu70= Single submitter ethylmalonic encephalopathy
  • p.Leu72= Single submitter ethylmalonic encephalopathy
  • p.Leu73= Single submitter ethylmalonic encephalopathy
  • p.Leu91= Single submitter ethylmalonic encephalopathy
  • p.Leu95= Single submitter ethylmalonic encephalopathy
  • p.Lys181= Single submitter ethylmalonic encephalopathy
  • p.Phe122= Single submitter ethylmalonic encephalopathy
  • p.Phe142= Single submitter ethylmalonic encephalopathy
  • p.Phe151= Single submitter
  • p.Phe183= Single submitter ethylmalonic encephalopathy
  • p.Phe36= Single submitter ethylmalonic encephalopathy
  • p.Pro133= Single submitter ethylmalonic encephalopathy
  • p.Pro137= Single submitter ethylmalonic encephalopathy
  • p.Pro186= Single submitter ethylmalonic encephalopathy
  • p.Pro213= Single submitter ethylmalonic encephalopathy
  • p.Pro22= Single submitter ethylmalonic encephalopathy
  • p.Pro252= Single submitter ethylmalonic encephalopathy
  • p.Ser103= Single submitter ethylmalonic encephalopathy
  • p.Ser132= Single submitter ethylmalonic encephalopathy
  • p.Ser177= Single submitter
  • p.Ser203= Single submitter ethylmalonic encephalopathy
  • p.Ser45= Single submitter ethylmalonic encephalopathy
  • p.Ser88= Single submitter ethylmalonic encephalopathy
  • p.Thr129= Single submitter ethylmalonic encephalopathy
  • p.Thr141= Single submitter ethylmalonic encephalopathy
  • p.Thr152= Single submitter ethylmalonic encephalopathy
  • p.Thr184= Single submitter ethylmalonic encephalopathy
  • p.Thr204= Single submitter ethylmalonic encephalopathy
  • p.Thr210= Single submitter ethylmalonic encephalopathy
  • p.Thr216= Single submitter ethylmalonic encephalopathy
  • p.Thr253= Single submitter ethylmalonic encephalopathy
  • p.Thr37= Single submitter ethylmalonic encephalopathy
  • p.Thr57= Single submitter ethylmalonic encephalopathy
  • p.Val140= Single submitter ethylmalonic encephalopathy
  • p.Val223= Single submitter ethylmalonic encephalopathy
  • p.Val249= Single submitter ethylmalonic encephalopathy
  • p.Val5= Single submitter ethylmalonic encephalopathy
  • p.Val54= Single submitter ethylmalonic encephalopathy
  • p.Val76= Single submitter ethylmalonic encephalopathy
  • p.Val8= Single submitter ethylmalonic encephalopathy
  • p.Val178= No assertion criteria ETHE1-related disorder

Uncertain significance 92